RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 SPATA1Q5VX52 437 aa7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 KRT27Q7Z3Y8 459 aa7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 PHLDB2Q86SQ0 1253 aa7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 BBOF1Q8ND07 529 aa7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 TSC1Q92574 1164 aa7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 LARP4BQ92615 738 aaKnown RBP7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 GJA10Q969M2 543 aa7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 RUNDC3BQ96NL0 473 aa7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 NT5C1BQ96P26 610 aa7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 JPH2Q9BR39 696 aaPredicted RBP7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 LSG1Q9H089 658 aaKnown RBP7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 GPR108Q9NPR9 543 aa7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 BCAP29Q9UHQ4 241 aa7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 CDC42BPGQ6DT37 1551 aa7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 ESYT2A0FGR8 921 aa7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 WDR46O15213 610 aaKnown RBP7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 PPFIA4O75335 1185 aa7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 CSPG5O95196 566 aa7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 LMNB1P20700 586 aa7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 STAT2P52630 851 aa7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 COPB1P53618 953 aaKnown RBP7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 PTK2Q05397 1052 aa7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 MKRN3Q13064 507 aaKnown RBP7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 TSTA3Q13630 321 aaPredicted RBP7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 TBC1D10BQ4KMP7 808 aaPredicted RBP7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 ZBTB33Q86T24 672 aa7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 RYBPQ8N488 228 aaPredicted RBP7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 PIGSQ96S52 555 aa7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 PALD1Q9ULE6 856 aa7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 NUB1Q9Y5A7 615 aa7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 ABCC12Q96J65 1359 aa7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 PSDA5PKW4 1024 aaPredicted RBP7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 RNF8O76064 485 aa7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 ARHGAP25P42331 645 aa7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 RNASELQ05823 741 aaKnown RBP7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 CABS1Q96KC9 395 aa7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 hCG_1984214I3L0E3 225 aa7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 PPP2R5EQ16537 467 aa7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 CCDC93Q567U6 631 aa7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 ZNF713Q8N859 430 aaPredicted RBP7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 MIPOL1Q8TD10 442 aa7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 ZNF526Q8TF50 670 aaPredicted RBP7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 CACTINQ8WUQ7 758 aaKnown RBP7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 GDAP1L1Q96MZ0 367 aa7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 RASSF4Q9H2L5 321 aa7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 ZBTB1Q9Y2K1 713 aa7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 CARMIL3Q8ND23 1372 aa7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 SGK1O00141 431 aa7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 ARPP19P56211 112 aa7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 RASGRP4Q8TDF6 673 aa7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 FOXP1Q9H334 677 aaPredicted RBP7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 CUEDC2Q9H467 287 aa7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 PTPN22Q9Y2R2 807 aa7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 MAD1L1Q9Y6D9 718 aa7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 EIF3CLB5ME19 914 aaKnown RBP7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 AFPP02771 609 aaKnown RBP7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 XPAP23025 273 aaPredicted RBP7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 ADD2P35612 726 aa7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 BPIFB4P59827 614 aa7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 PPP1R16BQ96T49 567 aa7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 EIF3CQ99613 913 aaKnown RBP7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 EFCC1Q9HA90 598 aa7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 STK38LQ9Y2H1 464 aa7.83□□□□□ -1.16
SYNPO2-205ENST00000504178 PASKQ96RG2 1323 aa7.82□□□□□ -1.16
SYNPO2-205ENST00000504178 PPP6R2O75170 966 aa7.82□□□□□ -1.16
SYNPO2-205ENST00000504178 IREB2P48200 963 aaKnown RBP7.82□□□□□ -1.16
SYNPO2-205ENST00000504178 CACNB1Q02641 598 aaPredicted RBP7.82□□□□□ -1.16
SYNPO2-205ENST00000504178 DALRD3Q5D0E6 543 aaKnown RBP7.82□□□□□ -1.16
SYNPO2-205ENST00000504178 RNF10Q8N5U6 811 aaKnown RBP7.82□□□□□ -1.16
SYNPO2-205ENST00000504178 TRIM11Q96F44 468 aa7.82□□□□□ -1.16
SYNPO2-205ENST00000504178 PCIF1Q9H4Z3 704 aa7.82□□□□□ -1.16
SYNPO2-205ENST00000504178 MTMR6Q9Y217 621 aa7.82□□□□□ -1.16
SYNPO2-205ENST00000504178 RNF123Q5XPI4 1314 aa7.82□□□□□ -1.16
SYNPO2-205ENST00000504178 ARHGAP42A6NI28 874 aa7.82□□□□□ -1.16
SYNPO2-205ENST00000504178 BMP3P12645 472 aa7.82□□□□□ -1.16
SYNPO2-205ENST00000504178 RASSF7Q02833 373 aa7.82□□□□□ -1.16
SYNPO2-205ENST00000504178 MAP7D3Q8IWC1 876 aa7.82□□□□□ -1.16
SYNPO2-205ENST00000504178 LCORLQ8N3X6 602 aa7.82□□□□□ -1.16
SYNPO2-205ENST00000504178 MYRIPQ8NFW9 859 aa7.82□□□□□ -1.16
SYNPO2-205ENST00000504178 HDAC11Q96DB2 347 aa7.82□□□□□ -1.16
SYNPO2-205ENST00000504178 SLC38A10Q9HBR0 1119 aa7.82□□□□□ -1.16
SYNPO2-205ENST00000504178 ZNF215Q9UL58 517 aaPredicted RBP7.82□□□□□ -1.16
SYNPO2-205ENST00000504178 ARAP3Q8WWN8 1544 aa7.82□□□□□ -1.16
SYNPO2-205ENST00000504178 AATKQ6ZMQ8 1374 aa7.82□□□□□ -1.16
SYNPO2-205ENST00000504178 SOS2Q07890 1332 aaPredicted RBP7.82□□□□□ -1.16
SYNPO2-205ENST00000504178 PSAPP07602 524 aa7.82□□□□□ -1.16
SYNPO2-205ENST00000504178 BBS5Q8N3I7 341 aa7.82□□□□□ -1.16
SYNPO2-205ENST00000504178 SLC7A3Q8WY07 619 aa7.82□□□□□ -1.16
SYNPO2-205ENST00000504178 CDKL2Q92772 493 aa7.82□□□□□ -1.16
SYNPO2-205ENST00000504178 FANCLQ9NW38 375 aa7.82□□□□□ -1.16
SYNPO2-205ENST00000504178 ZNF148Q9UQR1 794 aa7.82□□□□□ -1.16
SYNPO2-205ENST00000504178 INO80B-WBP1J3KQ70 363 aa7.82□□□□□ -1.16
SYNPO2-205ENST00000504178 BBOX1O75936 387 aa7.82□□□□□ -1.16
SYNPO2-205ENST00000504178 RAD17O75943 681 aa7.82□□□□□ -1.16
SYNPO2-205ENST00000504178 CC2D2BQ6DHV5 1058 aa7.82□□□□□ -1.16
SYNPO2-205ENST00000504178 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.82□□□□□ -1.16
SYNPO2-205ENST00000504178 HVCN1Q96D96 273 aa7.82□□□□□ -1.16
SYNPO2-205ENST00000504178 PPP1R12CQ9BZL4 782 aa7.82□□□□□ -1.16
SYNPO2-205ENST00000504178 INO80BQ9C086 356 aaPredicted RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms