RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 ABHD14A-ACY1A0A1B0GW23 586 aa18.77■□□□□ 0.6
PDLIM7-210ENST00000503827 A6NJR5 290 aa18.77■□□□□ 0.6
PDLIM7-210ENST00000503827 HMMRO75330 724 aa18.77■□□□□ 0.6
PDLIM7-210ENST00000503827 CHMP4BP1P59074 171 aa18.77■□□□□ 0.6
PDLIM7-210ENST00000503827 RCSD1Q6JBY9 416 aa18.77■□□□□ 0.6
PDLIM7-210ENST00000503827 KCTD1Q719H9 257 aa18.77■□□□□ 0.6
PDLIM7-210ENST00000503827 CTNNA3Q9UI47 895 aa18.77■□□□□ 0.6
PDLIM7-210ENST00000503827 FAM50BQ9Y247 325 aa18.77■□□□□ 0.6
PDLIM7-210ENST00000503827 EFCAB14O75071 495 aa18.76■□□□□ 0.59
PDLIM7-210ENST00000503827 APPP05067 770 aa18.76■□□□□ 0.59
PDLIM7-210ENST00000503827 ICAM1P05362 532 aa18.76■□□□□ 0.59
PDLIM7-210ENST00000503827 SELPP16109 830 aa18.76■□□□□ 0.59
PDLIM7-210ENST00000503827 GNAT2P19087 354 aa18.76■□□□□ 0.59
PDLIM7-210ENST00000503827 TFAP4Q01664 338 aa18.76■□□□□ 0.59
PDLIM7-210ENST00000503827 PDE4BQ07343 736 aa18.76■□□□□ 0.59
PDLIM7-210ENST00000503827 GPNMBQ14956 572 aa18.76■□□□□ 0.59
PDLIM7-210ENST00000503827 PPP4R3BQ5MIZ7 849 aa18.76■□□□□ 0.59
PDLIM7-210ENST00000503827 LRRC8DQ7L1W4 858 aa18.76■□□□□ 0.59
PDLIM7-210ENST00000503827 FBXO22Q8NEZ5 403 aa18.76■□□□□ 0.59
PDLIM7-210ENST00000503827 NEK9Q8TD19 979 aa18.76■□□□□ 0.59
PDLIM7-210ENST00000503827 MPHOSPH6Q99547 160 aaKnown RBP18.76■□□□□ 0.59
PDLIM7-210ENST00000503827 IKBKEQ14164 716 aa18.75■□□□□ 0.59
PDLIM7-210ENST00000503827 PTPROQ16827 1216 aa18.75■□□□□ 0.59
PDLIM7-210ENST00000503827 SCFD2Q8WU76 684 aa18.75■□□□□ 0.59
PDLIM7-210ENST00000503827 MFSD14AQ96MC6 490 aa18.75■□□□□ 0.59
PDLIM7-210ENST00000503827 EPB41L4AQ9HCS5 686 aaPredicted RBP18.75■□□□□ 0.59
PDLIM7-210ENST00000503827 PRKAG3Q9UGI9 489 aa18.75■□□□□ 0.59
PDLIM7-210ENST00000503827 ZNF318Q5VUA4 2279 aa18.74■□□□□ 0.59
PDLIM7-210ENST00000503827 PTPDC1A2A3K4 754 aa18.74■□□□□ 0.59
PDLIM7-210ENST00000503827 H3BQ06 376 aaPredicted RBP18.74■□□□□ 0.59
PDLIM7-210ENST00000503827 CXCL10P02778 98 aa18.74■□□□□ 0.59
PDLIM7-210ENST00000503827 PDE4DQ08499 809 aa18.74■□□□□ 0.59
PDLIM7-210ENST00000503827 FAM117BQ6P1L5 589 aa18.74■□□□□ 0.59
PDLIM7-210ENST00000503827 APPBP2Q92624 585 aa18.74■□□□□ 0.59
PDLIM7-210ENST00000503827 COPS5Q92905 334 aa18.74■□□□□ 0.59
PDLIM7-210ENST00000503827 OSBP2Q969R2 916 aa18.74■□□□□ 0.59
PDLIM7-210ENST00000503827 MRPL38Q96DV4 380 aaKnown RBP18.74■□□□□ 0.59
PDLIM7-210ENST00000503827 UPF3BQ9BZI7 483 aaKnown RBP18.74■□□□□ 0.59
PDLIM7-210ENST00000503827 INSL6Q9Y581 213 aa18.74■□□□□ 0.59
PDLIM7-210ENST00000503827 GPAA1O43292 621 aa18.73■□□□□ 0.59
PDLIM7-210ENST00000503827 SLC3A2P08195 630 aaKnown RBP18.73■□□□□ 0.59
PDLIM7-210ENST00000503827 TXNP10599 105 aaKnown RBP18.73■□□□□ 0.59
PDLIM7-210ENST00000503827 GDF6Q6KF10 455 aaPredicted RBP18.73■□□□□ 0.59
PDLIM7-210ENST00000503827 SESTD1Q86VW0 696 aa18.73■□□□□ 0.59
PDLIM7-210ENST00000503827 C17orf80Q9BSJ5 609 aa18.73■□□□□ 0.59
PDLIM7-210ENST00000503827 STX8Q9UNK0 236 aa18.73■□□□□ 0.59
PDLIM7-210ENST00000503827 NFIBO00712 420 aa18.72■□□□□ 0.59
PDLIM7-210ENST00000503827 NBNO60934 754 aa18.72■□□□□ 0.59
PDLIM7-210ENST00000503827 CALML3P27482 149 aa18.72■□□□□ 0.59
PDLIM7-210ENST00000503827 ZP2Q05996 745 aa18.72■□□□□ 0.59
PDLIM7-210ENST00000503827 RBL2Q08999 1139 aa18.72■□□□□ 0.59
PDLIM7-210ENST00000503827 TIGD5Q53EQ6 642 aa18.72■□□□□ 0.59
PDLIM7-210ENST00000503827 EP400NLQ6ZTU2 488 aa18.72■□□□□ 0.59
PDLIM7-210ENST00000503827 HFE2Q6ZVN8 426 aa18.72■□□□□ 0.59
PDLIM7-210ENST00000503827 IFNL3Q8IZI9 196 aa18.72■□□□□ 0.59
PDLIM7-210ENST00000503827 CTAGE1Q96RT6 745 aa18.72■□□□□ 0.59
PDLIM7-210ENST00000503827 RANBP17Q9H2T7 1088 aaKnown RBP18.72■□□□□ 0.59
PDLIM7-210ENST00000503827 MICAL3Q7RTP6 2002 aa18.72■□□□□ 0.59
PDLIM7-210ENST00000503827 NLRC5Q86WI3 1866 aa18.71■□□□□ 0.59
PDLIM7-210ENST00000503827 B4DLN1 442 aa18.71■□□□□ 0.59
PDLIM7-210ENST00000503827 PATL2C9JE40 543 aaKnown RBP18.71■□□□□ 0.59
PDLIM7-210ENST00000503827 CKBP12277 381 aa18.71■□□□□ 0.59
PDLIM7-210ENST00000503827 MRPL12P52815 198 aaKnown RBP18.71■□□□□ 0.59
PDLIM7-210ENST00000503827 SLC30A10Q6XR72 485 aa18.71■□□□□ 0.59
PDLIM7-210ENST00000503827 KBTBD3Q8NAB2 608 aa18.71■□□□□ 0.59
PDLIM7-210ENST00000503827 BANK1Q8NDB2 785 aa18.71■□□□□ 0.59
PDLIM7-210ENST00000503827 DHX38Q92620 1227 aaKnown RBP18.71■□□□□ 0.59
PDLIM7-210ENST00000503827 PABPC5Q96DU9 382 aaKnown RBP18.71■□□□□ 0.59
PDLIM7-210ENST00000503827 NACAP1Q9BZK3 213 aa18.71■□□□□ 0.59
PDLIM7-210ENST00000503827 MTMR7Q9Y216 660 aa18.71■□□□□ 0.59
PDLIM7-210ENST00000503827 C19orf67A6NJJ6 358 aa18.7■□□□□ 0.58
PDLIM7-210ENST00000503827 RNF113AO15541 343 aaKnown RBP18.7■□□□□ 0.58
PDLIM7-210ENST00000503827 CCDC96Q2M329 555 aa18.7■□□□□ 0.58
PDLIM7-210ENST00000503827 TCTN1Q2MV58 587 aa18.7■□□□□ 0.58
PDLIM7-210ENST00000503827 RNF207Q6ZRF8 634 aa18.7■□□□□ 0.58
PDLIM7-210ENST00000503827 ADHFE1Q8IWW8 467 aa18.7■□□□□ 0.58
PDLIM7-210ENST00000503827 PANK1Q8TE04 598 aa18.7■□□□□ 0.58
PDLIM7-210ENST00000503827 SAMD11Q96NU1 681 aa18.7■□□□□ 0.58
PDLIM7-210ENST00000503827 TSPY2A6NKD2 308 aa18.69■□□□□ 0.58
PDLIM7-210ENST00000503827 ZFYP08048 801 aaPredicted RBP18.69■□□□□ 0.58
PDLIM7-210ENST00000503827 EDNRBP24530 442 aa18.69■□□□□ 0.58
PDLIM7-210ENST00000503827 SIRT2Q8IXJ6 389 aa18.69■□□□□ 0.58
PDLIM7-210ENST00000503827 DNERQ8NFT8 737 aa18.69■□□□□ 0.58
PDLIM7-210ENST00000503827 WDFY4Q6ZS81 3184 aa18.69■□□□□ 0.58
PDLIM7-210ENST00000503827 ST18O60284 1047 aa18.68■□□□□ 0.58
PDLIM7-210ENST00000503827 AMHP03971 560 aa18.68■□□□□ 0.58
PDLIM7-210ENST00000503827 MMP3P08254 477 aa18.68■□□□□ 0.58
PDLIM7-210ENST00000503827 CASTP20810 708 aaKnown RBP18.68■□□□□ 0.58
PDLIM7-210ENST00000503827 IRS1P35568 1242 aa18.68■□□□□ 0.58
PDLIM7-210ENST00000503827 EPC2Q52LR7 807 aa18.68■□□□□ 0.58
PDLIM7-210ENST00000503827 TCEAL5Q5H9L2 206 aa18.68■□□□□ 0.58
PDLIM7-210ENST00000503827 RASGRP2Q7LDG7 609 aa18.68■□□□□ 0.58
PDLIM7-210ENST00000503827 DCAF4Q8WV16 495 aa18.68■□□□□ 0.58
PDLIM7-210ENST00000503827 AFG1LQ8WV93 481 aa18.68■□□□□ 0.58
PDLIM7-210ENST00000503827 ANKS1AQ92625 1134 aa18.68■□□□□ 0.58
PDLIM7-210ENST00000503827 GTF2IRD1Q9UHL9 959 aa18.68■□□□□ 0.58
PDLIM7-210ENST00000503827 PNMA2Q9UL42 364 aa18.68■□□□□ 0.58
PDLIM7-210ENST00000503827 KIAA1217Q5T5P2 1943 aa18.68■□□□□ 0.58
PDLIM7-210ENST00000503827 RALGAPA2Q2PPJ7 1873 aa18.67■□□□□ 0.58
PDLIM7-210ENST00000503827 M0R2C6 588 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms