RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 IRX5P78411 483 aaPredicted RBP17.7■□□□□ 0.42
HMGXB3-202ENST00000503427 EAPPQ56P03 285 aaPredicted RBP17.7■□□□□ 0.42
HMGXB3-202ENST00000503427 CCDC89Q8N998 374 aa17.7■□□□□ 0.42
HMGXB3-202ENST00000503427 DEPTORQ8TB45 409 aa17.7■□□□□ 0.42
HMGXB3-202ENST00000503427 PRPF3O43395 683 aaKnown RBP17.7■□□□□ 0.42
HMGXB3-202ENST00000503427 MMP1P03956 469 aa17.7■□□□□ 0.42
HMGXB3-202ENST00000503427 RBL2Q08999 1139 aa17.7■□□□□ 0.42
HMGXB3-202ENST00000503427 ANKRD20A3Q5VUR7 823 aa17.7■□□□□ 0.42
HMGXB3-202ENST00000503427 PLEKHG2Q9H7P9 1386 aa17.7■□□□□ 0.42
HMGXB3-202ENST00000503427 MYL1P05976 194 aa17.7■□□□□ 0.42
HMGXB3-202ENST00000503427 CA8P35219 290 aa17.7■□□□□ 0.42
HMGXB3-202ENST00000503427 USP14P54578 494 aa17.7■□□□□ 0.42
HMGXB3-202ENST00000503427 YWHAEP62258 255 aaKnown RBP17.7■□□□□ 0.42
HMGXB3-202ENST00000503427 MLXIPQ9HAP2 919 aa17.7■□□□□ 0.42
HMGXB3-202ENST00000503427 DAPK3O43293 454 aa17.7■□□□□ 0.42
HMGXB3-202ENST00000503427 MAN1B1Q9UKM7 699 aa17.7■□□□□ 0.42
HMGXB3-202ENST00000503427 GINS2Q9Y248 185 aa17.7■□□□□ 0.42
HMGXB3-202ENST00000503427 PPARDQ03181 441 aa17.69■□□□□ 0.42
HMGXB3-202ENST00000503427 FAM178BQ8IXR5 827 aa17.69■□□□□ 0.42
HMGXB3-202ENST00000503427 CFAP57Q96MR6 1250 aa17.69■□□□□ 0.42
HMGXB3-202ENST00000503427 PAGR1Q9BTK6 254 aa17.69■□□□□ 0.42
HMGXB3-202ENST00000503427 FTOQ9C0B1 505 aaKnown RBP eCLIP17.69■□□□□ 0.42
HMGXB3-202ENST00000503427 VCX3BQ9H321 246 aa17.69■□□□□ 0.42
HMGXB3-202ENST00000503427 TPD52P55327 224 aaPredicted RBP17.69■□□□□ 0.42
HMGXB3-202ENST00000503427 RTKN2Q8IZC4 609 aa17.69■□□□□ 0.42
HMGXB3-202ENST00000503427 SOS2Q07890 1332 aaPredicted RBP17.69■□□□□ 0.42
HMGXB3-202ENST00000503427 NEXMIFQ5QGS0 1516 aa17.69■□□□□ 0.42
HMGXB3-202ENST00000503427 CLRN2A0PK11 232 aa17.69■□□□□ 0.42
HMGXB3-202ENST00000503427 GMNNO75496 209 aa17.69■□□□□ 0.42
HMGXB3-202ENST00000503427 SDCCAG8Q86SQ7 713 aaPredicted RBP17.69■□□□□ 0.42
HMGXB3-202ENST00000503427 ANKRD35Q8N283 1001 aa17.69■□□□□ 0.42
HMGXB3-202ENST00000503427 ATF5Q9Y2D1 282 aaPredicted RBP17.69■□□□□ 0.42
HMGXB3-202ENST00000503427 ABCC12Q96J65 1359 aa17.69■□□□□ 0.42
HMGXB3-202ENST00000503427 MMP10P09238 476 aa17.69■□□□□ 0.42
HMGXB3-202ENST00000503427 ATP1A2P50993 1020 aa17.69■□□□□ 0.42
HMGXB3-202ENST00000503427 ZNF658Q5TYW1 1059 aaPredicted RBP17.69■□□□□ 0.42
HMGXB3-202ENST00000503427 VSTM4Q8IW00 320 aa17.69■□□□□ 0.42
HMGXB3-202ENST00000503427 BAIAP2L1Q9UHR4 511 aa17.69■□□□□ 0.42
HMGXB3-202ENST00000503427 CAPN7Q9Y6W3 813 aa17.69■□□□□ 0.42
HMGXB3-202ENST00000503427 USP17L3A6NCW0 530 aa17.68■□□□□ 0.42
HMGXB3-202ENST00000503427 USP17L4A6NCW7 530 aa17.68■□□□□ 0.42
HMGXB3-202ENST00000503427 USP17L1Q7RTZ2 530 aa17.68■□□□□ 0.42
HMGXB3-202ENST00000503427 DGKHQ86XP1 1220 aa17.68■□□□□ 0.42
HMGXB3-202ENST00000503427 ANKRD42Q8N9B4 389 aa17.68■□□□□ 0.42
HMGXB3-202ENST00000503427 DDX23Q9BUQ8 820 aaKnown RBP17.68■□□□□ 0.42
HMGXB3-202ENST00000503427 USP17L8P0C7I0 530 aa17.68■□□□□ 0.42
HMGXB3-202ENST00000503427 P2RX5Q93086 422 aa17.68■□□□□ 0.42
HMGXB3-202ENST00000503427 KLHL14Q9P2G3 628 aa17.68■□□□□ 0.42
HMGXB3-202ENST00000503427 DIXDC1Q155Q3 683 aa17.68■□□□□ 0.42
HMGXB3-202ENST00000503427 EXOC3L4Q17RC7 722 aa17.68■□□□□ 0.42
HMGXB3-202ENST00000503427 XKR9Q5GH70 373 aa17.68■□□□□ 0.42
HMGXB3-202ENST00000503427 FOXP4Q8IVH2 680 aaPredicted RBP17.68■□□□□ 0.42
HMGXB3-202ENST00000503427 LARP4BQ92615 738 aaKnown RBP17.68■□□□□ 0.42
HMGXB3-202ENST00000503427 TROVE2P10155 538 aaKnown RBP eCLIP17.67■□□□□ 0.42
HMGXB3-202ENST00000503427 TAF12Q16514 161 aa17.67■□□□□ 0.42
HMGXB3-202ENST00000503427 AFAP1L2Q8N4X5 818 aa17.67■□□□□ 0.42
HMGXB3-202ENST00000503427 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.67■□□□□ 0.426e-7■■■■■ 42.5
HMGXB3-202ENST00000503427 DPH5Q9H2P9 285 aa17.67■□□□□ 0.42
HMGXB3-202ENST00000503427 RIC8AQ9NPQ8 531 aa17.67■□□□□ 0.42
HMGXB3-202ENST00000503427 SPTLC3Q9NUV7 552 aa17.67■□□□□ 0.42
HMGXB3-202ENST00000503427 ZC3H13Q5T200 1668 aaKnown RBP17.67■□□□□ 0.42
HMGXB3-202ENST00000503427 SUPT20HL1Q3ZLR7 823 aa17.67■□□□□ 0.42
HMGXB3-202ENST00000503427 MGARPQ8TDB4 240 aa17.67■□□□□ 0.42
HMGXB3-202ENST00000503427 TYW1Q9NV66 732 aaKnown RBP17.67■□□□□ 0.42
HMGXB3-202ENST00000503427 MINPP1Q9UNW1 487 aa17.67■□□□□ 0.42
HMGXB3-202ENST00000503427 M0QZ92 97 aa17.67■□□□□ 0.42
HMGXB3-202ENST00000503427 BMP3P12645 472 aa17.67■□□□□ 0.42
HMGXB3-202ENST00000503427 GUCY2DQ02846 1103 aa17.67■□□□□ 0.42
HMGXB3-202ENST00000503427 FAM102BQ5T8I3 360 aa17.67■□□□□ 0.42
HMGXB3-202ENST00000503427 ZBTB8OSQ8IWT0 167 aa17.67■□□□□ 0.42
HMGXB3-202ENST00000503427 RNF34Q969K3 372 aa17.67■□□□□ 0.42
HMGXB3-202ENST00000503427 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.67■□□□□ 0.42
HMGXB3-202ENST00000503427 RASSF7Q02833 373 aa17.67■□□□□ 0.42
HMGXB3-202ENST00000503427 ANKRD13CQ8N6S4 541 aa17.67■□□□□ 0.42
HMGXB3-202ENST00000503427 PPP1R12CQ9BZL4 782 aa17.67■□□□□ 0.42
HMGXB3-202ENST00000503427 RAB20Q9NX57 234 aa17.67■□□□□ 0.42
HMGXB3-202ENST00000503427 RABGAP1Q9Y3P9 1069 aa17.67■□□□□ 0.42
HMGXB3-202ENST00000503427 CCDC151A5D8V7 595 aa17.66■□□□□ 0.42
HMGXB3-202ENST00000503427 ADCY8P40145 1251 aa17.66■□□□□ 0.42
HMGXB3-202ENST00000503427 EHHADHQ08426 723 aa17.66■□□□□ 0.42
HMGXB3-202ENST00000503427 GEN1Q17RS7 908 aa17.66■□□□□ 0.42
HMGXB3-202ENST00000503427 STAG1Q8WVM7 1258 aa17.66■□□□□ 0.42
HMGXB3-202ENST00000503427 SRPRBQ9Y5M8 271 aaKnown RBP17.66■□□□□ 0.42
HMGXB3-202ENST00000503427 KRT19P08727 400 aa17.66■□□□□ 0.42
HMGXB3-202ENST00000503427 RWDD2AQ9UIY3 292 aa17.66■□□□□ 0.42
HMGXB3-202ENST00000503427 K7ENM7 598 aa17.66■□□□□ 0.42
HMGXB3-202ENST00000503427 GOLGA8FQ08AF8 430 aa17.66■□□□□ 0.42
HMGXB3-202ENST00000503427 GOLGA8DPQ0D2H9 430 aa17.66■□□□□ 0.42
HMGXB3-202ENST00000503427 SLC27A3Q5K4L6 730 aa17.66■□□□□ 0.42
HMGXB3-202ENST00000503427 GADL1Q6ZQY3 521 aa17.66■□□□□ 0.42
HMGXB3-202ENST00000503427 CCT6BQ92526 530 aa17.66■□□□□ 0.42
HMGXB3-202ENST00000503427 SETD1BQ9UPS6 1966 aaKnown RBP17.66■□□□□ 0.42
HMGXB3-202ENST00000503427 P4HA1P13674 534 aa17.66■□□□□ 0.42
HMGXB3-202ENST00000503427 PHBP35232 272 aa17.66■□□□□ 0.42
HMGXB3-202ENST00000503427 PPM1FP49593 454 aaPredicted RBP17.66■□□□□ 0.42
HMGXB3-202ENST00000503427 PDE6CP51160 858 aa17.66■□□□□ 0.42
HMGXB3-202ENST00000503427 CCDC38Q502W7 563 aa17.66■□□□□ 0.42
HMGXB3-202ENST00000503427 HACE1Q8IYU2 909 aa17.66■□□□□ 0.42
HMGXB3-202ENST00000503427 TTLL6Q8N841 843 aa17.66■□□□□ 0.42
HMGXB3-202ENST00000503427 MTA3Q9BTC8 594 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms