RNA–Protein interactions for RNA: ENST00000503341.1

ARHGEF28-205, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 2

Gene ARHGEF28, Length 1,926 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-205ENST00000503341 PCDHA12Q9UN75 941 aa21.45■■□□□ 1.02
ARHGEF28-205ENST00000503341 SYNRGQ9UMZ2 1314 aa21.44■■□□□ 1.02
ARHGEF28-205ENST00000503341 HOXA13P31271 388 aaPredicted RBP21.44■■□□□ 1.02
ARHGEF28-205ENST00000503341 INPP5BP32019 993 aa21.44■■□□□ 1.02
ARHGEF28-205ENST00000503341 LRMPQ12912 555 aa21.44■■□□□ 1.02
ARHGEF28-205ENST00000503341 KMT5BQ4FZB7 885 aa21.44■■□□□ 1.02
ARHGEF28-205ENST00000503341 ANGEL2Q5VTE6 544 aaKnown RBP21.44■■□□□ 1.02
ARHGEF28-205ENST00000503341 KRT79Q5XKE5 535 aa21.44■■□□□ 1.02
ARHGEF28-205ENST00000503341 GPC2Q8N158 579 aa21.44■■□□□ 1.02
ARHGEF28-205ENST00000503341 GJA10Q969M2 543 aa21.44■■□□□ 1.02
ARHGEF28-205ENST00000503341 C7orf25Q9BPX7 421 aa21.44■■□□□ 1.02
ARHGEF28-205ENST00000503341 NUDT12Q9BQG2 462 aa21.44■■□□□ 1.02
ARHGEF28-205ENST00000503341 SAMSN1Q9NSI8 373 aaKnown RBP21.44■■□□□ 1.02
ARHGEF28-205ENST00000503341 STX17P56962 302 aa21.43■■□□□ 1.02
ARHGEF28-205ENST00000503341 DCAF15Q66K64 600 aa21.43■■□□□ 1.02
ARHGEF28-205ENST00000503341 APOBEC3FQ8IUX4 373 aaKnown RBP21.43■■□□□ 1.02
ARHGEF28-205ENST00000503341 LRRC8AQ8IWT6 810 aa21.43■■□□□ 1.02
ARHGEF28-205ENST00000503341 TRPM4Q8TD43 1214 aa21.43■■□□□ 1.02
ARHGEF28-205ENST00000503341 SNX29Q8TEQ0 813 aa21.43■■□□□ 1.02
ARHGEF28-205ENST00000503341 LPAR1Q92633 364 aa21.43■■□□□ 1.02
ARHGEF28-205ENST00000503341 NAP1L5Q96NT1 182 aaPredicted RBP21.43■■□□□ 1.02
ARHGEF28-205ENST00000503341 TRIM9Q9C026 710 aa21.43■■□□□ 1.02
ARHGEF28-205ENST00000503341 BLOC1S4Q9NUP1 217 aa21.43■■□□□ 1.02
ARHGEF28-205ENST00000503341 STK17AQ9UEE5 414 aa21.43■■□□□ 1.02
ARHGEF28-205ENST00000503341 WDR46O15213 610 aaKnown RBP21.43■■□□□ 1.02
ARHGEF28-205ENST00000503341 RHOBTB3O94955 611 aa21.43■■□□□ 1.02
ARHGEF28-205ENST00000503341 AMPD3Q01432 767 aa21.43■■□□□ 1.02
ARHGEF28-205ENST00000503341 Q4G0T1 1027 aa21.43■■□□□ 1.02
ARHGEF28-205ENST00000503341 HSP90AA4PQ58FG1 418 aa21.43■■□□□ 1.02
ARHGEF28-205ENST00000503341 CDK5RAP3Q96JB5 506 aa21.43■■□□□ 1.02
ARHGEF28-205ENST00000503341 GDAQ9Y2T3 454 aa21.43■■□□□ 1.02
ARHGEF28-205ENST00000503341 SMCHD1A6NHR9 2005 aa21.42■■□□□ 1.02
ARHGEF28-205ENST00000503341 CDK11BP21127 795 aaKnown RBP21.42■■□□□ 1.02
ARHGEF28-205ENST00000503341 CIITAP33076 1130 aa21.42■■□□□ 1.02
ARHGEF28-205ENST00000503341 ARID5BQ14865 1188 aa21.42■■□□□ 1.02
ARHGEF28-205ENST00000503341 TMC6Q7Z403 805 aa21.42■■□□□ 1.02
ARHGEF28-205ENST00000503341 RWDD2AQ9UIY3 292 aa21.42■■□□□ 1.02
ARHGEF28-205ENST00000503341 ZNF112Q9UJU3 913 aa21.42■■□□□ 1.02
ARHGEF28-205ENST00000503341 CTNND2Q9UQB3 1225 aa21.42■■□□□ 1.02
ARHGEF28-205ENST00000503341 MRPL11Q9Y3B7 192 aaKnown RBP21.42■■□□□ 1.02
ARHGEF28-205ENST00000503341 DICER1Q9UPY3 1922 aaKnown RBP21.42■■□□□ 1.02
ARHGEF28-205ENST00000503341 CYP3A4P08684 503 aa21.41■■□□□ 1.02
ARHGEF28-205ENST00000503341 GSDMDP57764 484 aa21.41■■□□□ 1.02
ARHGEF28-205ENST00000503341 NOLC1Q14978 699 aaKnown RBP eCLIP21.41■■□□□ 1.02
ARHGEF28-205ENST00000503341 TMEM119Q4V9L6 283 aa21.41■■□□□ 1.02
ARHGEF28-205ENST00000503341 SLFN12Q8IYM2 578 aa21.41■■□□□ 1.02
ARHGEF28-205ENST00000503341 TBC1D5Q92609 795 aa21.41■■□□□ 1.02
ARHGEF28-205ENST00000503341 GCOM1H8Y6P7 765 aaPredicted RBP21.41■■□□□ 1.02
ARHGEF28-205ENST00000503341 TBX3O15119 743 aa21.41■■□□□ 1.02
ARHGEF28-205ENST00000503341 CFBP00751 764 aa21.41■■□□□ 1.02
ARHGEF28-205ENST00000503341 POLR2MP0CAP2 368 aa21.41■■□□□ 1.02
ARHGEF28-205ENST00000503341 PRCPP42785 496 aa21.41■■□□□ 1.02
ARHGEF28-205ENST00000503341 PRR16Q569H4 304 aa21.41■■□□□ 1.02
ARHGEF28-205ENST00000503341 SAMD1Q6SPF0 538 aaPredicted RBP21.41■■□□□ 1.02
ARHGEF28-205ENST00000503341 SV2BQ7L1I2 683 aa21.41■■□□□ 1.02
ARHGEF28-205ENST00000503341 LDHDQ86WU2 507 aa21.41■■□□□ 1.02
ARHGEF28-205ENST00000503341 C17orf53Q8N3J3 647 aaPredicted RBP21.41■■□□□ 1.02
ARHGEF28-205ENST00000503341 ETNPPLQ8TBG4 499 aa21.41■■□□□ 1.02
ARHGEF28-205ENST00000503341 LENG9Q96B70 501 aa21.41■■□□□ 1.02
ARHGEF28-205ENST00000503341 HOOK2Q96ED9 719 aa21.41■■□□□ 1.02
ARHGEF28-205ENST00000503341 FHDC1Q9C0D6 1143 aaPredicted RBP21.41■■□□□ 1.02
ARHGEF28-205ENST00000503341 ABCB11O95342 1321 aa21.4■■□□□ 1.02
ARHGEF28-205ENST00000503341 FAM86B1E9PN63 330 aa21.4■■□□□ 1.02
ARHGEF28-205ENST00000503341 FAM86B2P0C5J1 330 aa21.4■■□□□ 1.02
ARHGEF28-205ENST00000503341 PAK1Q13153 545 aa21.4■■□□□ 1.02
ARHGEF28-205ENST00000503341 CDKAL1Q5VV42 579 aa21.4■■□□□ 1.02
ARHGEF28-205ENST00000503341 FCHSD1Q86WN1 690 aa21.4■■□□□ 1.02
ARHGEF28-205ENST00000503341 ADSSL1Q8N142 457 aa21.4■■□□□ 1.02
ARHGEF28-205ENST00000503341 PRPF38AQ8NAV1 312 aaKnown RBP21.4■■□□□ 1.02
ARHGEF28-205ENST00000503341 GIMAP8Q8ND71 665 aaPredicted RBP21.4■■□□□ 1.02
ARHGEF28-205ENST00000503341 LARP4BQ92615 738 aaKnown RBP21.4■■□□□ 1.02
ARHGEF28-205ENST00000503341 RAD54LQ92698 747 aa21.4■■□□□ 1.02
ARHGEF28-205ENST00000503341 INTS13Q9NVM9 706 aa21.4■■□□□ 1.02
ARHGEF28-205ENST00000503341 OFD1O75665 1012 aa21.39■■□□□ 1.02
ARHGEF28-205ENST00000503341 EPS15P42566 896 aa21.39■■□□□ 1.02
ARHGEF28-205ENST00000503341 HIRAP54198 1017 aaPredicted RBP21.39■■□□□ 1.02
ARHGEF28-205ENST00000503341 MCM6Q14566 821 aa21.39■■□□□ 1.02
ARHGEF28-205ENST00000503341 ECM1Q16610 540 aa21.39■■□□□ 1.02
ARHGEF28-205ENST00000503341 HYIQ5T013 277 aa21.39■■□□□ 1.02
ARHGEF28-205ENST00000503341 PRAMEF18Q5VWM3 479 aa21.39■■□□□ 1.02
ARHGEF28-205ENST00000503341 NELFBQ8WX92 580 aa21.39■■□□□ 1.02
ARHGEF28-205ENST00000503341 SLF1Q9BQI6 1058 aa21.39■■□□□ 1.02
ARHGEF28-205ENST00000503341 SPTLC3Q9NUV7 552 aa21.39■■□□□ 1.02
ARHGEF28-205ENST00000503341 ZNF536O15090 1300 aa21.39■■□□□ 1.01
ARHGEF28-205ENST00000503341 DHX8Q14562 1220 aaKnown RBP21.39■■□□□ 1.01
ARHGEF28-205ENST00000503341 VSTM4Q8IW00 320 aa21.39■■□□□ 1.01
ARHGEF28-205ENST00000503341 SCYL3Q8IZE3 742 aa21.39■■□□□ 1.01
ARHGEF28-205ENST00000503341 UIMC1Q96RL1 719 aa21.39■■□□□ 1.01
ARHGEF28-205ENST00000503341 SLC26A4O43511 780 aa21.38■■□□□ 1.01
ARHGEF28-205ENST00000503341 ICAM1P05362 532 aa21.38■■□□□ 1.01
ARHGEF28-205ENST00000503341 ASIC1P78348 528 aa21.38■■□□□ 1.01
ARHGEF28-205ENST00000503341 DGKZQ13574 1117 aa21.38■■□□□ 1.01
ARHGEF28-205ENST00000503341 KCNK18Q7Z418 384 aa21.38■■□□□ 1.01
ARHGEF28-205ENST00000503341 CCDC47Q96A33 483 aaKnown RBP21.38■■□□□ 1.01
ARHGEF28-205ENST00000503341 FAM20AQ96MK3 541 aa21.38■■□□□ 1.01
ARHGEF28-205ENST00000503341 WDR18Q9BV38 432 aa21.38■■□□□ 1.01
ARHGEF28-205ENST00000503341 EMILIN3Q9NT22 766 aa21.38■■□□□ 1.01
ARHGEF28-205ENST00000503341 GGA3Q9NZ52 723 aa21.38■■□□□ 1.01
ARHGEF28-205ENST00000503341 MAPK8IP1Q9UQF2 711 aa21.38■■□□□ 1.01
ARHGEF28-205ENST00000503341 DOCK1Q14185 1865 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms