RNA–Protein interactions for RNA: ENST00000502991.5

RFC1-205, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-205ENST00000502991 GORABQ5T7V8 394 aa6.33□□□□□ -1.4
RFC1-205ENST00000502991 RPTNQ6XPR3 784 aa6.33□□□□□ -1.4
RFC1-205ENST00000502991 ZNF227Q86WZ6 799 aa6.33□□□□□ -1.4
RFC1-205ENST00000502991 TRIM59Q8IWR1 403 aa6.33□□□□□ -1.4
RFC1-205ENST00000502991 LRRC56Q8IYG6 542 aaPredicted RBP6.33□□□□□ -1.4
RFC1-205ENST00000502991 CNTD2Q9H8S5 307 aa6.33□□□□□ -1.4
RFC1-205ENST00000502991 SPC25Q9HBM1 224 aa6.33□□□□□ -1.4
RFC1-205ENST00000502991 PDLIM7Q9NR12 457 aa6.33□□□□□ -1.4
RFC1-205ENST00000502991 LRP2BPQ9P2M1 347 aa6.33□□□□□ -1.4
RFC1-205ENST00000502991 NPHP3-ACAD11A0A0J9YXS1 232 aa6.32□□□□□ -1.4
RFC1-205ENST00000502991 SEMA7AO75326 666 aa6.32□□□□□ -1.4
RFC1-205ENST00000502991 THBDP07204 575 aa6.32□□□□□ -1.4
RFC1-205ENST00000502991 LINC00310P59036 64 aa6.32□□□□□ -1.4
RFC1-205ENST00000502991 SF1Q15637 639 aaKnown RBP6.32□□□□□ -1.4
RFC1-205ENST00000502991 PLEKHG6Q3KR16 790 aa6.32□□□□□ -1.4
RFC1-205ENST00000502991 PLEKHG4Q58EX7 1191 aa6.32□□□□□ -1.4
RFC1-205ENST00000502991 PANK1Q8TE04 598 aa6.32□□□□□ -1.4
RFC1-205ENST00000502991 IRF2BPLQ9H1B7 796 aa6.32□□□□□ -1.4
RFC1-205ENST00000502991 BCAS3Q9H6U6 928 aa6.32□□□□□ -1.4
RFC1-205ENST00000502991 CHPF2Q9P2E5 772 aa6.32□□□□□ -1.4
RFC1-205ENST00000502991 FAN1Q9Y2M0 1017 aa6.32□□□□□ -1.4
RFC1-205ENST00000502991 PRKAB1Q9Y478 270 aa6.32□□□□□ -1.4
RFC1-205ENST00000502991 KLF4O43474 513 aa6.31□□□□□ -1.4
RFC1-205ENST00000502991 DBHP09172 617 aa6.31□□□□□ -1.4
RFC1-205ENST00000502991 NAT2P11245 290 aa6.31□□□□□ -1.4
RFC1-205ENST00000502991 PAMP19021 973 aa6.31□□□□□ -1.4
RFC1-205ENST00000502991 CDR1P51861 262 aa6.31□□□□□ -1.4
RFC1-205ENST00000502991 ZNF143P52747 638 aaPredicted RBP6.31□□□□□ -1.4
RFC1-205ENST00000502991 INF2Q27J81 1249 aa6.31□□□□□ -1.4
RFC1-205ENST00000502991 PRSS53Q2L4Q9 553 aa6.31□□□□□ -1.4
RFC1-205ENST00000502991 PLEKHN1Q494U1 663 aaPredicted RBP6.31□□□□□ -1.4
RFC1-205ENST00000502991 LCE1DQ5T752 114 aa6.31□□□□□ -1.4
RFC1-205ENST00000502991 POMZP3Q6PJE2 187 aa6.31□□□□□ -1.4
RFC1-205ENST00000502991 LCNL1Q6ZST4 164 aa6.31□□□□□ -1.4
RFC1-205ENST00000502991 EXOC8Q8IYI6 725 aa6.31□□□□□ -1.4
RFC1-205ENST00000502991 RPUSD2Q8IZ73 545 aaKnown RBP6.31□□□□□ -1.4
RFC1-205ENST00000502991 ZNF526Q8TF50 670 aaPredicted RBP6.31□□□□□ -1.4
RFC1-205ENST00000502991 COPS5Q92905 334 aa6.31□□□□□ -1.4
RFC1-205ENST00000502991 RNPC3Q96LT9 517 aaKnown RBP6.31□□□□□ -1.4
RFC1-205ENST00000502991 TMX1Q9H3N1 280 aa6.31□□□□□ -1.4
RFC1-205ENST00000502991 SIRPGQ9P1W8 387 aa6.31□□□□□ -1.4
RFC1-205ENST00000502991 MAGEC2Q9UBF1 373 aaPredicted RBP6.31□□□□□ -1.4
RFC1-205ENST00000502991 TMEFF2Q9UIK5 374 aaPredicted RBP6.31□□□□□ -1.4
RFC1-205ENST00000502991 R3HCC1Q9Y3T6 440 aaKnown RBP6.31□□□□□ -1.4
RFC1-205ENST00000502991 CCDC194A0A1B0GVG4 234 aa6.3□□□□□ -1.4
RFC1-205ENST00000502991 ZC3H12DA2A288 527 aaKnown RBP6.3□□□□□ -1.4
RFC1-205ENST00000502991 C7orf72A4D263 438 aa6.3□□□□□ -1.4
RFC1-205ENST00000502991 F8W031 263 aaPredicted RBP6.3□□□□□ -1.4
RFC1-205ENST00000502991 ARNTLO00327 626 aa6.3□□□□□ -1.4
RFC1-205ENST00000502991 ECI1P42126 302 aa6.3□□□□□ -1.4
RFC1-205ENST00000502991 GRIA2P42262 883 aa6.3□□□□□ -1.4
RFC1-205ENST00000502991 ZNF200P98182 395 aaPredicted RBP6.3□□□□□ -1.4
RFC1-205ENST00000502991 SLC10A6Q3KNW5 377 aa6.3□□□□□ -1.4
RFC1-205ENST00000502991 FRS2Q8WU20 508 aa6.3□□□□□ -1.4
RFC1-205ENST00000502991 TOX2Q96NM4 488 aa6.3□□□□□ -1.4
RFC1-205ENST00000502991 NKX2-4Q9H2Z4 354 aa6.3□□□□□ -1.4
RFC1-205ENST00000502991 BTG4Q9NY30 223 aa6.3□□□□□ -1.4
RFC1-205ENST00000502991 PPP1R12AO14974 1030 aaPredicted RBP6.29□□□□□ -1.4
RFC1-205ENST00000502991 U2SURPO15042 1029 aaKnown RBP6.29□□□□□ -1.4
RFC1-205ENST00000502991 NUAK1O60285 661 aa6.29□□□□□ -1.4
RFC1-205ENST00000502991 SNRPB2P08579 225 aaKnown RBP6.29□□□□□ -1.4
RFC1-205ENST00000502991 PI3P19957 117 aa6.29□□□□□ -1.4
RFC1-205ENST00000502991 DDR2Q16832 855 aa6.29□□□□□ -1.4
RFC1-205ENST00000502991 SPOCD1Q6ZMY3 1216 aa6.29□□□□□ -1.4
RFC1-205ENST00000502991 LDHDQ86WU2 507 aa6.29□□□□□ -1.4
RFC1-205ENST00000502991 IGDCC3Q8IVU1 814 aa6.29□□□□□ -1.4
RFC1-205ENST00000502991 CCDC103Q8IW40 242 aa6.29□□□□□ -1.4
RFC1-205ENST00000502991 CRACR2BQ8N4Y2 399 aaPredicted RBP6.29□□□□□ -1.4
RFC1-205ENST00000502991 LZTR1Q8N653 840 aa6.29□□□□□ -1.4
RFC1-205ENST00000502991 DPF3Q92784 378 aa6.29□□□□□ -1.4
RFC1-205ENST00000502991 SRPK1Q96SB4 655 aaKnown RBP6.29□□□□□ -1.4
RFC1-205ENST00000502991 CYP26B1Q9NR63 512 aa6.29□□□□□ -1.4
RFC1-205ENST00000502991 DDX56Q9NY93 547 aaKnown RBP6.29□□□□□ -1.4
RFC1-205ENST00000502991 CNOT6Q9ULM6 557 aaKnown RBP6.29□□□□□ -1.4
RFC1-205ENST00000502991 HRKO00198 91 aa6.28□□□□□ -1.4
RFC1-205ENST00000502991 ABLIM1O14639 778 aa6.28□□□□□ -1.4
RFC1-205ENST00000502991 N4BP3O15049 544 aa6.28□□□□□ -1.4
RFC1-205ENST00000502991 MAP4K4O95819 1239 aaPredicted RBP6.28□□□□□ -1.4
RFC1-205ENST00000502991 FUCA1P04066 466 aa6.28□□□□□ -1.4
RFC1-205ENST00000502991 CYBBP04839 570 aa6.28□□□□□ -1.4
RFC1-205ENST00000502991 ZSCAN22P10073 491 aaPredicted RBP6.28□□□□□ -1.4
RFC1-205ENST00000502991 GLI4P10075 376 aa6.28□□□□□ -1.4
RFC1-205ENST00000502991 PRR5P85299 388 aa6.28□□□□□ -1.4
RFC1-205ENST00000502991 CBX2Q14781 532 aaPredicted RBP6.28□□□□□ -1.4
RFC1-205ENST00000502991 PAQR3Q6TCH7 311 aa6.28□□□□□ -1.4
RFC1-205ENST00000502991 EEPD1Q7L9B9 569 aa6.28□□□□□ -1.4
RFC1-205ENST00000502991 NLGN2Q8NFZ4 835 aa6.28□□□□□ -1.4
RFC1-205ENST00000502991 NPLOC4Q8TAT6 608 aa6.28□□□□□ -1.4
RFC1-205ENST00000502991 MZB1Q8WU39 189 aa6.28□□□□□ -1.4
RFC1-205ENST00000502991 MTA3Q9BTC8 594 aa6.28□□□□□ -1.4
RFC1-205ENST00000502991 KCTD3Q9Y597 815 aa6.28□□□□□ -1.4
RFC1-205ENST00000502991 S100BP04271 92 aaPredicted RBP6.27□□□□□ -1.41
RFC1-205ENST00000502991 KCNJ6P48051 423 aa6.27□□□□□ -1.41
RFC1-205ENST00000502991 MAPKAPK2P49137 400 aa6.27□□□□□ -1.41
RFC1-205ENST00000502991 CORO7P57737 925 aa6.27□□□□□ -1.41
RFC1-205ENST00000502991 NR1I3Q14994 352 aa6.27□□□□□ -1.41
RFC1-205ENST00000502991 DENND5AQ6IQ26 1287 aa6.27□□□□□ -1.41
RFC1-205ENST00000502991 ZC3H14Q6PJT7 736 aaKnown RBP6.27□□□□□ -1.41
RFC1-205ENST00000502991 LRP10Q7Z4F1 713 aa6.27□□□□□ -1.41
RFC1-205ENST00000502991 TEX2Q8IWB9 1127 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms