RNA–Protein interactions for RNA: ENST00000502443.1

USP46-203, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-203ENST00000502443 EDNRBP24530 442 aa8.41□□□□□ -1.06
USP46-203ENST00000502443 ADCYAP1R1P41586 468 aa8.41□□□□□ -1.06
USP46-203ENST00000502443 MNX1P50219 401 aaPredicted RBP8.41□□□□□ -1.06
USP46-203ENST00000502443 AK2P54819 239 aa8.41□□□□□ -1.06
USP46-203ENST00000502443 NAPAP54920 295 aa8.41□□□□□ -1.06
USP46-203ENST00000502443 TNFAIP2Q03169 654 aa8.41□□□□□ -1.06
USP46-203ENST00000502443 STXBP2Q15833 593 aa8.41□□□□□ -1.06
USP46-203ENST00000502443 GJC2Q5T442 439 aaPredicted RBP8.41□□□□□ -1.06
USP46-203ENST00000502443 WWC2Q6AWC2 1192 aa8.41□□□□□ -1.06
USP46-203ENST00000502443 TAPT1Q6NXT6 567 aa8.41□□□□□ -1.06
USP46-203ENST00000502443 USP17L6PQ6QN14 398 aa8.41□□□□□ -1.06
USP46-203ENST00000502443 UBE2Q1Q7Z7E8 422 aa8.41□□□□□ -1.06
USP46-203ENST00000502443 SMARCC2Q8TAQ2 1214 aa8.41□□□□□ -1.06
USP46-203ENST00000502443 PHKBQ93100 1093 aa8.41□□□□□ -1.06
USP46-203ENST00000502443 IWS1Q96ST2 819 aa8.41□□□□□ -1.06
USP46-203ENST00000502443 SLC26A6Q9BXS9 759 aa8.41□□□□□ -1.06
USP46-203ENST00000502443 ALDH8A1Q9H2A2 487 aaPredicted RBP8.41□□□□□ -1.06
USP46-203ENST00000502443 SLKQ9H2G2 1235 aaPredicted RBP8.41□□□□□ -1.06
USP46-203ENST00000502443 C11orf49Q9H6J7 331 aa8.41□□□□□ -1.06
USP46-203ENST00000502443 PSTPIP2Q9H939 334 aa8.41□□□□□ -1.06
USP46-203ENST00000502443 PXMP2Q9NR77 195 aa8.41□□□□□ -1.06
USP46-203ENST00000502443 PDGFCQ9NRA1 345 aa8.41□□□□□ -1.06
USP46-203ENST00000502443 RBM27Q9P2N5 1060 aaKnown RBP8.41□□□□□ -1.06
USP46-203ENST00000502443 LRRC37A2A6NM11 1700 aa8.4□□□□□ -1.06
USP46-203ENST00000502443 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.4□□□□□ -1.06
USP46-203ENST00000502443 hCG_1984214I3L0E3 225 aa8.4□□□□□ -1.06
USP46-203ENST00000502443 STXBP3O00186 592 aa8.4□□□□□ -1.06
USP46-203ENST00000502443 PIK3CDO00329 1044 aa8.4□□□□□ -1.06
USP46-203ENST00000502443 DNM1LO00429 736 aa8.4□□□□□ -1.06
USP46-203ENST00000502443 MEIS2O14770 477 aa8.4□□□□□ -1.06
USP46-203ENST00000502443 ADCY6O43306 1168 aa8.4□□□□□ -1.06
USP46-203ENST00000502443 PRPF3O43395 683 aaKnown RBP8.4□□□□□ -1.06
USP46-203ENST00000502443 NR3C2P08235 984 aa8.4□□□□□ -1.06
USP46-203ENST00000502443 MYCLP12524 364 aaPredicted RBP8.4□□□□□ -1.06
USP46-203ENST00000502443 SCG2P13521 617 aa8.4□□□□□ -1.06
USP46-203ENST00000502443 IFNAR1P17181 557 aa8.4□□□□□ -1.06
USP46-203ENST00000502443 SMPD1P17405 629 aa8.4□□□□□ -1.06
USP46-203ENST00000502443 RBM25P49756 843 aaKnown RBP8.4□□□□□ -1.06
USP46-203ENST00000502443 LRRC41Q15345 812 aa8.4□□□□□ -1.06
USP46-203ENST00000502443 NTRK3Q16288 839 aa8.4□□□□□ -1.06
USP46-203ENST00000502443 PFKFB3Q16875 520 aaPredicted RBP8.4□□□□□ -1.06
USP46-203ENST00000502443 IQSEC1Q6DN90 963 aa8.4□□□□□ -1.06
USP46-203ENST00000502443 CPLX2Q6PUV4 134 aaKnown RBP8.4□□□□□ -1.06
USP46-203ENST00000502443 SEPT14Q6ZU15 432 aa8.4□□□□□ -1.06
USP46-203ENST00000502443 RNF180Q86T96 592 aa8.4□□□□□ -1.06
USP46-203ENST00000502443 TRIM22Q8IYM9 498 aa8.4□□□□□ -1.06
USP46-203ENST00000502443 ZNF713Q8N859 430 aaPredicted RBP8.4□□□□□ -1.06
USP46-203ENST00000502443 HTATIP2Q9BUP3 242 aa8.4□□□□□ -1.06
USP46-203ENST00000502443 RNF26Q9BY78 433 aaPredicted RBP8.4□□□□□ -1.06
USP46-203ENST00000502443 WDR11Q9BZH6 1224 aa8.4□□□□□ -1.06
USP46-203ENST00000502443 SENP6Q9GZR1 1112 aaPredicted RBP8.4□□□□□ -1.06
USP46-203ENST00000502443 SPC25Q9HBM1 224 aa8.4□□□□□ -1.06
USP46-203ENST00000502443 BARHL2Q9NY43 387 aa8.4□□□□□ -1.06
USP46-203ENST00000502443 TPCN1Q9ULQ1 816 aa8.4□□□□□ -1.06
USP46-203ENST00000502443 KIAA1217Q5T5P2 1943 aa8.39□□□□□ -1.07
USP46-203ENST00000502443 SYNRGQ9UMZ2 1314 aa8.39□□□□□ -1.07
USP46-203ENST00000502443 SMCO2A6NFE2 343 aa8.39□□□□□ -1.07
USP46-203ENST00000502443 PFKFB2O60825 505 aa8.39□□□□□ -1.07
USP46-203ENST00000502443 EIF3JO75822 258 aaKnown RBP8.39□□□□□ -1.07
USP46-203ENST00000502443 C6orf222P0C671 652 aaPredicted RBP8.39□□□□□ -1.07
USP46-203ENST00000502443 TXNP10599 105 aaKnown RBP8.39□□□□□ -1.07
USP46-203ENST00000502443 CCND2P30279 289 aa8.39□□□□□ -1.07
USP46-203ENST00000502443 SSRP1Q08945 709 aaKnown RBP8.39□□□□□ -1.07
USP46-203ENST00000502443 SCRN1Q12765 414 aa8.39□□□□□ -1.07
USP46-203ENST00000502443 PGM5Q15124 567 aa8.39□□□□□ -1.07
USP46-203ENST00000502443 PKN1Q16512 942 aa8.39□□□□□ -1.07
USP46-203ENST00000502443 UBE2SQ16763 222 aa8.39□□□□□ -1.07
USP46-203ENST00000502443 ME3Q16798 604 aa8.39□□□□□ -1.07
USP46-203ENST00000502443 DUSP28Q4G0W2 176 aa8.39□□□□□ -1.07
USP46-203ENST00000502443 GNASQ5JWF2 1037 aa8.39□□□□□ -1.07
USP46-203ENST00000502443 TMEM63BQ5T3F8 832 aa8.39□□□□□ -1.07
USP46-203ENST00000502443 TYW1BQ6NUM6 668 aa8.39□□□□□ -1.07
USP46-203ENST00000502443 PPP1R18Q6NYC8 613 aa8.39□□□□□ -1.07
USP46-203ENST00000502443 TLK2Q86UE8 772 aa8.39□□□□□ -1.07
USP46-203ENST00000502443 SCFD2Q8WU76 684 aa8.39□□□□□ -1.07
USP46-203ENST00000502443 DPF3Q92784 378 aa8.39□□□□□ -1.07
USP46-203ENST00000502443 FERMT2Q96AC1 680 aa8.39□□□□□ -1.07
USP46-203ENST00000502443 ZFP91Q96JP5 570 aaPredicted RBP8.39□□□□□ -1.07
USP46-203ENST00000502443 KIF2CQ99661 725 aa8.39□□□□□ -1.07
USP46-203ENST00000502443 PDCD2LQ9BRP1 358 aa8.39□□□□□ -1.07
USP46-203ENST00000502443 AP5M1Q9H0R1 490 aa8.39□□□□□ -1.07
USP46-203ENST00000502443 RIC8AQ9NPQ8 531 aa8.39□□□□□ -1.07
USP46-203ENST00000502443 GNEQ9Y223 722 aaKnown RBP8.39□□□□□ -1.07
USP46-203ENST00000502443 TNRC18O15417 2968 aaPredicted RBP8.39□□□□□ -1.07
USP46-203ENST00000502443 RBM47A0AV96 593 aaKnown RBP8.38□□□□□ -1.07
USP46-203ENST00000502443 MYADML2A6NDP7 307 aa8.38□□□□□ -1.07
USP46-203ENST00000502443 SPDYE3A6NKU9 549 aa8.38□□□□□ -1.07
USP46-203ENST00000502443 DYNC1LI2O43237 492 aaPredicted RBP8.38□□□□□ -1.07
USP46-203ENST00000502443 ADAMTS4O75173 837 aa8.38□□□□□ -1.07
USP46-203ENST00000502443 CDKL5O76039 1030 aa8.38□□□□□ -1.07
USP46-203ENST00000502443 COL6A1P12109 1028 aa8.38□□□□□ -1.07
USP46-203ENST00000502443 PTGS1P23219 599 aa8.38□□□□□ -1.07
USP46-203ENST00000502443 ADCY7P51828 1080 aa8.38□□□□□ -1.07
USP46-203ENST00000502443 GJA9P57773 515 aa8.38□□□□□ -1.07
USP46-203ENST00000502443 IRX5P78411 483 aaPredicted RBP8.38□□□□□ -1.07
USP46-203ENST00000502443 TTLL4Q14679 1199 aa8.38□□□□□ -1.07
USP46-203ENST00000502443 KCNA10Q16322 511 aa8.38□□□□□ -1.07
USP46-203ENST00000502443 VSIG10LQ86VR7 867 aa8.38□□□□□ -1.07
USP46-203ENST00000502443 NECAB1Q8N987 351 aa8.38□□□□□ -1.07
USP46-203ENST00000502443 IL31RAQ8NI17 732 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms