RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 ME3Q16798 604 aa19.3■□□□□ 0.68
PRKCB-210ENST00000498739 PPP1R18Q6NYC8 613 aa19.3■□□□□ 0.68
PRKCB-210ENST00000498739 USP17L6PQ6QN14 398 aa19.3■□□□□ 0.68
PRKCB-210ENST00000498739 TRIM22Q8IYM9 498 aa19.3■□□□□ 0.68
PRKCB-210ENST00000498739 TBC1D32Q96NH3 1257 aa19.3■□□□□ 0.68
PRKCB-210ENST00000498739 PSTPIP2Q9H939 334 aa19.3■□□□□ 0.68
PRKCB-210ENST00000498739 PXMP2Q9NR77 195 aa19.3■□□□□ 0.68
PRKCB-210ENST00000498739 BARHL2Q9NY43 387 aa19.3■□□□□ 0.68
PRKCB-210ENST00000498739 OGDHLQ9ULD0 1010 aa19.3■□□□□ 0.68
PRKCB-210ENST00000498739 LRRC37A2A6NM11 1700 aa19.3■□□□□ 0.68
PRKCB-210ENST00000498739 STXBP3O00186 592 aa19.29■□□□□ 0.68
PRKCB-210ENST00000498739 RARBP10826 455 aa19.29■□□□□ 0.68
PRKCB-210ENST00000498739 SSRP1Q08945 709 aaKnown RBP19.29■□□□□ 0.68
PRKCB-210ENST00000498739 RABEP1Q15276 862 aa19.29■□□□□ 0.68
PRKCB-210ENST00000498739 PKN1Q16512 942 aa19.29■□□□□ 0.68
PRKCB-210ENST00000498739 CCDC144BQ3MJ40 725 aa19.29■□□□□ 0.68
PRKCB-210ENST00000498739 TYW1BQ6NUM6 668 aa19.29■□□□□ 0.68
PRKCB-210ENST00000498739 VTA1Q9NP79 307 aa19.29■□□□□ 0.68
PRKCB-210ENST00000498739 PIK3CDO00329 1044 aa19.28■□□□□ 0.68
PRKCB-210ENST00000498739 MEIS2O14770 477 aa19.28■□□□□ 0.68
PRKCB-210ENST00000498739 CDKL5O76039 1030 aa19.28■□□□□ 0.68
PRKCB-210ENST00000498739 CAPN2P17655 700 aa19.28■□□□□ 0.68
PRKCB-210ENST00000498739 ADCYAP1R1P41586 468 aa19.28■□□□□ 0.68
PRKCB-210ENST00000498739 UBE2SQ16763 222 aa19.28■□□□□ 0.68
PRKCB-210ENST00000498739 NECAB1Q8N987 351 aa19.28■□□□□ 0.68
PRKCB-210ENST00000498739 LENG1Q96BZ8 264 aaPredicted RBP19.28■□□□□ 0.68
PRKCB-210ENST00000498739 IWS1Q96ST2 819 aa19.28■□□□□ 0.68
PRKCB-210ENST00000498739 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.27■□□□□ 0.68
PRKCB-210ENST00000498739 MYCNP04198 464 aaPredicted RBP19.27■□□□□ 0.68
PRKCB-210ENST00000498739 RGS19P49795 217 aa19.27■□□□□ 0.68
PRKCB-210ENST00000498739 STXBP2Q15833 593 aa19.27■□□□□ 0.68
PRKCB-210ENST00000498739 TAPT1Q6NXT6 567 aa19.27■□□□□ 0.68
PRKCB-210ENST00000498739 GTF3C6Q969F1 213 aa19.27■□□□□ 0.68
PRKCB-210ENST00000498739 PDCD2LQ9BRP1 358 aa19.27■□□□□ 0.68
PRKCB-210ENST00000498739 XPNPEP3Q9NQH7 507 aa19.27■□□□□ 0.68
PRKCB-210ENST00000498739 PDGFCQ9NRA1 345 aa19.27■□□□□ 0.68
PRKCB-210ENST00000498739 LIMCH1Q9UPQ0 1083 aa19.27■□□□□ 0.68
PRKCB-210ENST00000498739 FRMPD3Q5JV73 1810 aa19.26■□□□□ 0.67
PRKCB-210ENST00000498739 SMCO2A6NFE2 343 aa19.26■□□□□ 0.67
PRKCB-210ENST00000498739 ADCY6O43306 1168 aa19.26■□□□□ 0.67
PRKCB-210ENST00000498739 FARP2O94887 1054 aaPredicted RBP19.26■□□□□ 0.67
PRKCB-210ENST00000498739 DEXIO95424 95 aa19.26■□□□□ 0.67
PRKCB-210ENST00000498739 NR3C2P08235 984 aa19.26■□□□□ 0.67
PRKCB-210ENST00000498739 MYCLP12524 364 aaPredicted RBP19.26■□□□□ 0.67
PRKCB-210ENST00000498739 ADCY7P51828 1080 aa19.26■□□□□ 0.67
PRKCB-210ENST00000498739 TNFAIP2Q03169 654 aa19.26■□□□□ 0.67
PRKCB-210ENST00000498739 PGM5Q15124 567 aa19.26■□□□□ 0.67
PRKCB-210ENST00000498739 ANKLE1Q8NAG6 615 aa19.26■□□□□ 0.67
PRKCB-210ENST00000498739 CCDC12Q8WUD4 166 aaPredicted RBP19.26■□□□□ 0.67
PRKCB-210ENST00000498739 RIC8AQ9NPQ8 531 aa19.26■□□□□ 0.67
PRKCB-210ENST00000498739 MCM3APO60318 1980 aa19.26■□□□□ 0.67
PRKCB-210ENST00000498739 ST18O60284 1047 aa19.25■□□□□ 0.67
PRKCB-210ENST00000498739 DTNBO60941 627 aa19.25■□□□□ 0.67
PRKCB-210ENST00000498739 IL31RAQ8NI17 732 aa19.25■□□□□ 0.67
PRKCB-210ENST00000498739 DIS3LQ8TF46 1054 aaKnown RBP19.25■□□□□ 0.67
PRKCB-210ENST00000498739 VPS54Q9P1Q0 977 aa19.25■□□□□ 0.67
PRKCB-210ENST00000498739 SPDYE3A6NKU9 549 aa19.24■□□□□ 0.67
PRKCB-210ENST00000498739 DUSP11O75319 330 aaKnown RBP19.24■□□□□ 0.67
PRKCB-210ENST00000498739 CTDNEP1O95476 244 aa19.24■□□□□ 0.67
PRKCB-210ENST00000498739 PGK1P00558 417 aa19.24■□□□□ 0.67
PRKCB-210ENST00000498739 CCND2P30279 289 aa19.24■□□□□ 0.67
PRKCB-210ENST00000498739 GJC2Q5T442 439 aaPredicted RBP19.24■□□□□ 0.67
PRKCB-210ENST00000498739 IQSEC1Q6DN90 963 aa19.24■□□□□ 0.67
PRKCB-210ENST00000498739 ARRDC4Q8NCT1 418 aa19.24■□□□□ 0.67
PRKCB-210ENST00000498739 CCDC148Q8NFR7 591 aa19.24■□□□□ 0.67
PRKCB-210ENST00000498739 PAWRQ96IZ0 340 aaKnown RBP19.24■□□□□ 0.67
PRKCB-210ENST00000498739 FRMPD4Q14CM0 1322 aa19.24■□□□□ 0.67
PRKCB-210ENST00000498739 SYNRGQ9UMZ2 1314 aa19.24■□□□□ 0.67
PRKCB-210ENST00000498739 ESYT2A0FGR8 921 aa19.23■□□□□ 0.67
PRKCB-210ENST00000498739 EIF3JO75822 258 aaKnown RBP19.23■□□□□ 0.67
PRKCB-210ENST00000498739 SMPD1P17405 629 aa19.23■□□□□ 0.67
PRKCB-210ENST00000498739 MNX1P50219 401 aaPredicted RBP19.23■□□□□ 0.67
PRKCB-210ENST00000498739 TMEM63BQ5T3F8 832 aa19.23■□□□□ 0.67
PRKCB-210ENST00000498739 SEPT14Q6ZU15 432 aa19.23■□□□□ 0.67
PRKCB-210ENST00000498739 ZFP91Q96JP5 570 aaPredicted RBP19.23■□□□□ 0.67
PRKCB-210ENST00000498739 ZSCAN31Q96LW9 406 aaPredicted RBP19.23■□□□□ 0.67
PRKCB-210ENST00000498739 WDR11Q9BZH6 1224 aa19.23■□□□□ 0.67
PRKCB-210ENST00000498739 ZMYND12Q9H0C1 365 aa19.23■□□□□ 0.67
PRKCB-210ENST00000498739 GLT8D2Q9H1C3 349 aa19.23■□□□□ 0.67
PRKCB-210ENST00000498739 C6orf50Q9HD87 102 aa19.23■□□□□ 0.67
PRKCB-210ENST00000498739 PCDHA6Q9UN73 950 aa19.23■□□□□ 0.67
PRKCB-210ENST00000498739 PCDHA8Q9Y5H6 950 aa19.23■□□□□ 0.67
PRKCB-210ENST00000498739 STK36Q9NRP7 1315 aa19.23■□□□□ 0.67
PRKCB-210ENST00000498739 RBM47A0AV96 593 aaKnown RBP19.22■□□□□ 0.67
PRKCB-210ENST00000498739 KBTBD13C9JR72 458 aa19.22■□□□□ 0.67
PRKCB-210ENST00000498739 DNM1LO00429 736 aa19.22■□□□□ 0.67
PRKCB-210ENST00000498739 MLLT1Q03111 559 aaPredicted RBP19.22■□□□□ 0.67
PRKCB-210ENST00000498739 ST3GAL1Q11201 340 aa19.22■□□□□ 0.67
PRKCB-210ENST00000498739 LRRC41Q15345 812 aa19.22■□□□□ 0.67
PRKCB-210ENST00000498739 NECAB2Q7Z6G3 386 aa19.22■□□□□ 0.67
PRKCB-210ENST00000498739 UBE2Q1Q7Z7E8 422 aa19.22■□□□□ 0.67
PRKCB-210ENST00000498739 RNF180Q86T96 592 aa19.22■□□□□ 0.67
PRKCB-210ENST00000498739 VSIG10LQ86VR7 867 aa19.22■□□□□ 0.67
PRKCB-210ENST00000498739 TEX2Q8IWB9 1127 aa19.22■□□□□ 0.67
PRKCB-210ENST00000498739 CCDC83Q8IWF9 413 aa19.22■□□□□ 0.67
PRKCB-210ENST00000498739 SCFD2Q8WU76 684 aa19.22■□□□□ 0.67
PRKCB-210ENST00000498739 PGBD1Q96JS3 809 aa19.22■□□□□ 0.67
PRKCB-210ENST00000498739 AIFM3Q96NN9 605 aa19.22■□□□□ 0.67
PRKCB-210ENST00000498739 EHMT1Q9H9B1 1298 aa19.22■□□□□ 0.67
PRKCB-210ENST00000498739 SPC25Q9HBM1 224 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms