RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 KCNA5P22460 613 aa10.81□□□□□ -0.68
CCDC171-209ENST00000498725 WDR5P61964 334 aaKnown RBP10.81□□□□□ -0.68
CCDC171-209ENST00000498725 CTDSPL2Q05D32 466 aa10.81□□□□□ -0.68
CCDC171-209ENST00000498725 PDE4DQ08499 809 aa10.81□□□□□ -0.68
CCDC171-209ENST00000498725 BFSP2Q13515 415 aa10.81□□□□□ -0.68
CCDC171-209ENST00000498725 TTBK2Q6IQ55 1244 aa10.81□□□□□ -0.68
CCDC171-209ENST00000498725 RCSD1Q6JBY9 416 aa10.81□□□□□ -0.68
CCDC171-209ENST00000498725 SLC30A10Q6XR72 485 aa10.81□□□□□ -0.68
CCDC171-209ENST00000498725 KBTBD3Q8NAB2 608 aa10.81□□□□□ -0.68
CCDC171-209ENST00000498725 GMCL1Q96IK5 515 aa10.81□□□□□ -0.68
CCDC171-209ENST00000498725 LRRCC1Q9C099 1032 aa10.81□□□□□ -0.68
CCDC171-209ENST00000498725 UBE2ZQ9H832 354 aaPredicted RBP10.81□□□□□ -0.68
CCDC171-209ENST00000498725 GPCPD1Q9NPB8 672 aa10.81□□□□□ -0.68
CCDC171-209ENST00000498725 ADD3Q9UEY8 706 aaKnown RBP10.81□□□□□ -0.68
CCDC171-209ENST00000498725 TSPY2A6NKD2 308 aa10.8□□□□□ -0.68
CCDC171-209ENST00000498725 PATL2C9JE40 543 aaKnown RBP10.8□□□□□ -0.68
CCDC171-209ENST00000498725 IL9P15248 144 aa10.8□□□□□ -0.68
CCDC171-209ENST00000498725 PPP2R5BQ15173 497 aa10.8□□□□□ -0.68
CCDC171-209ENST00000498725 PTGISQ16647 500 aa10.8□□□□□ -0.68
CCDC171-209ENST00000498725 CSPP1Q1MSJ5 1256 aa10.8□□□□□ -0.68
CCDC171-209ENST00000498725 BRDTQ58F21 947 aaPredicted RBP10.8□□□□□ -0.68
CCDC171-209ENST00000498725 EP400NLQ6ZTU2 488 aa10.8□□□□□ -0.68
CCDC171-209ENST00000498725 NAPBQ9H115 298 aa10.8□□□□□ -0.68
CCDC171-209ENST00000498725 NLRC5Q86WI3 1866 aa10.8□□□□□ -0.68
CCDC171-209ENST00000498725 FRMPD2Q68DX3 1309 aaPredicted RBP10.8□□□□□ -0.68
CCDC171-209ENST00000498725 RAD50Q92878 1312 aa10.8□□□□□ -0.68
CCDC171-209ENST00000498725 KIAA1217Q5T5P2 1943 aa10.8□□□□□ -0.68
CCDC171-209ENST00000498725 PLIN4Q96Q06 1357 aa10.79□□□□□ -0.68
CCDC171-209ENST00000498725 BAIAP3O94812 1187 aa10.79□□□□□ -0.68
CCDC171-209ENST00000498725 ICAM1P05362 532 aa10.79□□□□□ -0.68
CCDC171-209ENST00000498725 SLC3A2P08195 630 aaKnown RBP10.79□□□□□ -0.68
CCDC171-209ENST00000498725 TXNP10599 105 aaKnown RBP10.79□□□□□ -0.68
CCDC171-209ENST00000498725 GNAT2P19087 354 aa10.79□□□□□ -0.68
CCDC171-209ENST00000498725 MRE11P49959 708 aa10.79□□□□□ -0.68
CCDC171-209ENST00000498725 PPARAQ07869 468 aa10.79□□□□□ -0.68
CCDC171-209ENST00000498725 TCTN1Q2MV58 587 aa10.79□□□□□ -0.68
CCDC171-209ENST00000498725 GDF6Q6KF10 455 aaPredicted RBP10.79□□□□□ -0.68
CCDC171-209ENST00000498725 NFRKBQ6P4R8 1299 aa10.79□□□□□ -0.68
CCDC171-209ENST00000498725 CHST3Q7LGC8 479 aa10.79□□□□□ -0.68
CCDC171-209ENST00000498725 FAM178BQ8IXR5 827 aa10.79□□□□□ -0.68
CCDC171-209ENST00000498725 GJD3Q8N144 294 aa10.79□□□□□ -0.68
CCDC171-209ENST00000498725 MORC4Q8TE76 937 aa10.79□□□□□ -0.68
CCDC171-209ENST00000498725 NACAP1Q9BZK3 213 aa10.79□□□□□ -0.68
CCDC171-209ENST00000498725 SUGCTQ9HAC7 445 aa10.79□□□□□ -0.68
CCDC171-209ENST00000498725 ECHDC1Q9NTX5 307 aa10.79□□□□□ -0.68
CCDC171-209ENST00000498725 ZBTB40Q9NUA8 1239 aa10.79□□□□□ -0.68
CCDC171-209ENST00000498725 SYNPO2Q9UMS6 1093 aa10.79□□□□□ -0.68
CCDC171-209ENST00000498725 MYH6P13533 1939 aa10.78□□□□□ -0.68
CCDC171-209ENST00000498725 RBM47A0AV96 593 aaKnown RBP10.78□□□□□ -0.68
CCDC171-209ENST00000498725 PRR33A8MZF0 331 aa10.78□□□□□ -0.68
CCDC171-209ENST00000498725 RANBP6O60518 1105 aaKnown RBP10.78□□□□□ -0.68
CCDC171-209ENST00000498725 PTCRAQ6ISU1 281 aaPredicted RBP10.78□□□□□ -0.68
CCDC171-209ENST00000498725 CCDC155Q8N6L0 562 aa10.78□□□□□ -0.68
CCDC171-209ENST00000498725 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.78□□□□□ -0.68
CCDC171-209ENST00000498725 TGS1Q96RS0 853 aaKnown RBP10.78□□□□□ -0.68
CCDC171-209ENST00000498725 IL17RBQ9NRM6 502 aa10.78□□□□□ -0.68
CCDC171-209ENST00000498725 TOMM22Q9NS69 142 aa10.78□□□□□ -0.68
CCDC171-209ENST00000498725 DDX19BQ9UMR2 479 aa10.78□□□□□ -0.68
CCDC171-209ENST00000498725 LINC01553A4QN01 128 aa10.77□□□□□ -0.69
CCDC171-209ENST00000498725 H3BQ06 376 aaPredicted RBP10.77□□□□□ -0.69
CCDC171-209ENST00000498725 KPNA6O60684 536 aa10.77□□□□□ -0.69
CCDC171-209ENST00000498725 PLA2G6O60733 806 aa10.77□□□□□ -0.69
CCDC171-209ENST00000498725 ARIH2O95376 493 aa10.77□□□□□ -0.69
CCDC171-209ENST00000498725 ZFYP08048 801 aaPredicted RBP10.77□□□□□ -0.69
CCDC171-209ENST00000498725 MS4A1P11836 297 aa10.77□□□□□ -0.69
CCDC171-209ENST00000498725 SYDE2Q5VT97 1194 aa10.77□□□□□ -0.69
CCDC171-209ENST00000498725 CNKSR3Q6P9H4 555 aa10.77□□□□□ -0.69
CCDC171-209ENST00000498725 RNF207Q6ZRF8 634 aa10.77□□□□□ -0.69
CCDC171-209ENST00000498725 LRRC8DQ7L1W4 858 aa10.77□□□□□ -0.69
CCDC171-209ENST00000498725 FBXO22Q8NEZ5 403 aa10.77□□□□□ -0.69
CCDC171-209ENST00000498725 AFAP1L1Q8TED9 768 aa10.77□□□□□ -0.69
CCDC171-209ENST00000498725 SCFD2Q8WU76 684 aa10.77□□□□□ -0.69
CCDC171-209ENST00000498725 AFG1LQ8WV93 481 aa10.77□□□□□ -0.69
CCDC171-209ENST00000498725 GPATCH3Q96I76 525 aa10.77□□□□□ -0.69
CCDC171-209ENST00000498725 C17orf80Q9BSJ5 609 aa10.77□□□□□ -0.69
CCDC171-209ENST00000498725 ALG1Q9BT22 464 aa10.77□□□□□ -0.69
CCDC171-209ENST00000498725 RANBP17Q9H2T7 1088 aaKnown RBP10.77□□□□□ -0.69
CCDC171-209ENST00000498725 MICAL3Q7RTP6 2002 aa10.77□□□□□ -0.69
CCDC171-209ENST00000498725 ATG2AQ2TAZ0 1938 aa10.76□□□□□ -0.69
CCDC171-209ENST00000498725 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.76□□□□□ -0.69
CCDC171-209ENST00000498725 A6NJR5 290 aa10.76□□□□□ -0.69
CCDC171-209ENST00000498725 NKRFO15226 690 aaKnown RBP eCLIP10.76□□□□□ -0.69
CCDC171-209ENST00000498725 NBNO60934 754 aa10.76□□□□□ -0.69
CCDC171-209ENST00000498725 SELPP16109 830 aa10.76□□□□□ -0.69
CCDC171-209ENST00000498725 ERVK-21P61565 698 aa10.76□□□□□ -0.69
CCDC171-209ENST00000498725 PTPN11Q06124 597 aaPredicted RBP10.76□□□□□ -0.69
CCDC171-209ENST00000498725 GPNMBQ14956 572 aa10.76□□□□□ -0.69
CCDC171-209ENST00000498725 LY6KQ17RY6 165 aa10.76□□□□□ -0.69
CCDC171-209ENST00000498725 LRRFIP1Q32MZ4 808 aaKnown RBP10.76□□□□□ -0.69
CCDC171-209ENST00000498725 LEXMQ3ZCV2 418 aa10.76□□□□□ -0.69
CCDC171-209ENST00000498725 USH1GQ495M9 461 aa10.76□□□□□ -0.69
CCDC171-209ENST00000498725 RRP12Q5JTH9 1297 aaKnown RBP10.76□□□□□ -0.69
CCDC171-209ENST00000498725 SEPT14Q6ZU15 432 aa10.76□□□□□ -0.69
CCDC171-209ENST00000498725 CAGE1Q8TC20 777 aa10.76□□□□□ -0.69
CCDC171-209ENST00000498725 DCAF4Q8WV16 495 aa10.76□□□□□ -0.69
CCDC171-209ENST00000498725 CLEC4DQ8WXI8 215 aa10.76□□□□□ -0.69
CCDC171-209ENST00000498725 DHX38Q92620 1227 aaKnown RBP10.76□□□□□ -0.69
CCDC171-209ENST00000498725 ANKS1AQ92625 1134 aa10.76□□□□□ -0.69
CCDC171-209ENST00000498725 MPHOSPH6Q99547 160 aaKnown RBP10.76□□□□□ -0.69
CCDC171-209ENST00000498725 RAD9AQ99638 391 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms