RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 SPRED2Q7Z698 418 aa6.81□□□□□ -1.32
SPTA1-209ENST00000498708 DZIP1Q86YF9 867 aaKnown RBP6.81□□□□□ -1.32
SPTA1-209ENST00000498708 HOMEZQ8IX15 550 aa6.81□□□□□ -1.32
SPTA1-209ENST00000498708 BEND7Q8N7W2 519 aaPredicted RBP6.81□□□□□ -1.32
SPTA1-209ENST00000498708 XAGE2Q96GT9 111 aa6.81□□□□□ -1.32
SPTA1-209ENST00000498708 ZSCAN10Q96SZ4 725 aaPredicted RBP6.81□□□□□ -1.32
SPTA1-209ENST00000498708 WDR18Q9BV38 432 aa6.81□□□□□ -1.32
SPTA1-209ENST00000498708 IL23AQ9NPF7 189 aa6.81□□□□□ -1.32
SPTA1-209ENST00000498708 XPNPEP3Q9NQH7 507 aa6.81□□□□□ -1.32
SPTA1-209ENST00000498708 GNL3LQ9NVN8 582 aaKnown RBP6.81□□□□□ -1.32
SPTA1-209ENST00000498708 BTBD7Q9P203 1132 aa6.81□□□□□ -1.32
SPTA1-209ENST00000498708 NOB1Q9ULX3 412 aaKnown RBP6.81□□□□□ -1.32
SPTA1-209ENST00000498708 DOLKQ9UPQ8 538 aa6.81□□□□□ -1.32
SPTA1-209ENST00000498708 PLXNA3P51805 1871 aa6.81□□□□□ -1.32
SPTA1-209ENST00000498708 ZNFX1Q9P2E3 1918 aaKnown RBP6.8□□□□□ -1.32
SPTA1-209ENST00000498708 E9PSI1 815 aa6.8□□□□□ -1.32
SPTA1-209ENST00000498708 LPXNO60711 386 aa6.8□□□□□ -1.32
SPTA1-209ENST00000498708 COBLO75128 1261 aa6.8□□□□□ -1.32
SPTA1-209ENST00000498708 TECTAO75443 2155 aa6.8□□□□□ -1.32
SPTA1-209ENST00000498708 IL2RAP01589 272 aa6.8□□□□□ -1.32
SPTA1-209ENST00000498708 CA3P07451 260 aa6.8□□□□□ -1.32
SPTA1-209ENST00000498708 BTDP43251 543 aa6.8□□□□□ -1.32
SPTA1-209ENST00000498708 CDK7P50613 346 aa6.8□□□□□ -1.32
SPTA1-209ENST00000498708 SLFN5Q08AF3 891 aa6.8□□□□□ -1.32
SPTA1-209ENST00000498708 GRB10Q13322 594 aa6.8□□□□□ -1.32
SPTA1-209ENST00000498708 RIF1Q5UIP0 2472 aaKnown RBP6.8□□□□□ -1.32
SPTA1-209ENST00000498708 CCDC102BQ68D86 513 aa6.8□□□□□ -1.32
SPTA1-209ENST00000498708 TMEM214Q6NUQ4 689 aaKnown RBP6.8□□□□□ -1.32
SPTA1-209ENST00000498708 ERMP1Q7Z2K6 904 aa6.8□□□□□ -1.32
SPTA1-209ENST00000498708 DPP9Q86TI2 863 aa6.8□□□□□ -1.32
SPTA1-209ENST00000498708 TMEM199Q8N511 208 aa6.8□□□□□ -1.32
SPTA1-209ENST00000498708 ARNTL2Q8WYA1 636 aa6.8□□□□□ -1.32
SPTA1-209ENST00000498708 LENG1Q96BZ8 264 aaPredicted RBP6.8□□□□□ -1.32
SPTA1-209ENST00000498708 MFSD14AQ96MC6 490 aa6.8□□□□□ -1.32
SPTA1-209ENST00000498708 NEUROD6Q96NK8 337 aa6.8□□□□□ -1.32
SPTA1-209ENST00000498708 AS3MTQ9HBK9 375 aa6.8□□□□□ -1.32
SPTA1-209ENST00000498708 DENND2AQ9ULE3 1009 aa6.8□□□□□ -1.32
SPTA1-209ENST00000498708 RABGAP1Q9Y3P9 1069 aa6.8□□□□□ -1.32
SPTA1-209ENST00000498708 PCDHA11Q9Y5I1 949 aa6.8□□□□□ -1.32
SPTA1-209ENST00000498708 GAKO14976 1311 aa6.79□□□□□ -1.32
SPTA1-209ENST00000498708 KIF16BQ96L93 1317 aa6.79□□□□□ -1.32
SPTA1-209ENST00000498708 DMXL1Q9Y485 3027 aa6.79□□□□□ -1.32
SPTA1-209ENST00000498708 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.79□□□□□ -1.32
SPTA1-209ENST00000498708 RARBP10826 455 aa6.79□□□□□ -1.32
SPTA1-209ENST00000498708 TAL1P17542 331 aaPredicted RBP6.79□□□□□ -1.32
SPTA1-209ENST00000498708 ADORA2AP29274 412 aa6.79□□□□□ -1.32
SPTA1-209ENST00000498708 IL15P40933 162 aaPredicted RBP6.79□□□□□ -1.32
SPTA1-209ENST00000498708 MAP2K3P46734 347 aa6.79□□□□□ -1.32
SPTA1-209ENST00000498708 ACLYP53396 1101 aa6.79□□□□□ -1.32
SPTA1-209ENST00000498708 TFCP2Q12800 502 aa6.79□□□□□ -1.32
SPTA1-209ENST00000498708 RASGRF1Q13972 1273 aa6.79□□□□□ -1.32
SPTA1-209ENST00000498708 LBRQ14739 615 aaKnown RBP6.79□□□□□ -1.32
SPTA1-209ENST00000498708 PI16Q6UXB8 463 aa6.79□□□□□ -1.32
SPTA1-209ENST00000498708 TBC1D9Q6ZT07 1266 aa6.79□□□□□ -1.32
SPTA1-209ENST00000498708 RNF180Q86T96 592 aa6.79□□□□□ -1.32
SPTA1-209ENST00000498708 RNF135Q8IUD6 432 aa6.79□□□□□ -1.32
SPTA1-209ENST00000498708 PGBD3Q8N328 593 aa6.79□□□□□ -1.32
SPTA1-209ENST00000498708 NEDD1Q8NHV4 660 aa6.79□□□□□ -1.32
SPTA1-209ENST00000498708 VWCEQ96DN2 955 aa6.79□□□□□ -1.32
SPTA1-209ENST00000498708 MEIS3Q99687 375 aa6.79□□□□□ -1.32
SPTA1-209ENST00000498708 UBE2ZQ9H832 354 aaPredicted RBP6.79□□□□□ -1.32
SPTA1-209ENST00000498708 ALG13Q9NP73 1137 aaKnown RBP6.79□□□□□ -1.32
SPTA1-209ENST00000498708 STARD7Q9NQZ5 370 aa6.79□□□□□ -1.32
SPTA1-209ENST00000498708 HRH3Q9Y5N1 445 aa6.79□□□□□ -1.32
SPTA1-209ENST00000498708 IVNS1ABPQ9Y6Y0 642 aa6.79□□□□□ -1.32
SPTA1-209ENST00000498708 COL4A4P53420 1690 aaPredicted RBP6.79□□□□□ -1.32
SPTA1-209ENST00000498708 CACNA1HO95180 2353 aa6.79□□□□□ -1.32
SPTA1-209ENST00000498708 UMODL1Q5DID0 1318 aa6.78□□□□□ -1.32
SPTA1-209ENST00000498708 SIPA1L1O43166 1804 aa6.78□□□□□ -1.32
SPTA1-209ENST00000498708 COL4A6Q14031 1691 aa6.78□□□□□ -1.32
SPTA1-209ENST00000498708 A0A1B0GUL7 405 aa6.78□□□□□ -1.32
SPTA1-209ENST00000498708 C19orf81C9J6K1 198 aa6.78□□□□□ -1.32
SPTA1-209ENST00000498708 USP17L10C9JJH3 530 aa6.78□□□□□ -1.32
SPTA1-209ENST00000498708 ADAMTS4O75173 837 aa6.78□□□□□ -1.32
SPTA1-209ENST00000498708 CIAO1O76071 339 aa6.78□□□□□ -1.32
SPTA1-209ENST00000498708 ATP2A2P16615 1042 aaKnown RBP6.78□□□□□ -1.32
SPTA1-209ENST00000498708 KCNA5P22460 613 aa6.78□□□□□ -1.32
SPTA1-209ENST00000498708 CCNA1P78396 465 aa6.78□□□□□ -1.32
SPTA1-209ENST00000498708 MECOMQ03112 1051 aa6.78□□□□□ -1.32
SPTA1-209ENST00000498708 TAP1Q03518 808 aa6.78□□□□□ -1.32
SPTA1-209ENST00000498708 KCNA10Q16322 511 aa6.78□□□□□ -1.32
SPTA1-209ENST00000498708 ALDH1L2Q3SY69 923 aa6.78□□□□□ -1.32
SPTA1-209ENST00000498708 LEXMQ3ZCV2 418 aa6.78□□□□□ -1.32
SPTA1-209ENST00000498708 TMEM67Q5HYA8 995 aa6.78□□□□□ -1.32
SPTA1-209ENST00000498708 GORABQ5T7V8 394 aa6.78□□□□□ -1.32
SPTA1-209ENST00000498708 PHTF2Q8N3S3 785 aa6.78□□□□□ -1.32
SPTA1-209ENST00000498708 GTF3C2Q8WUA4 911 aaPredicted RBP6.78□□□□□ -1.32
SPTA1-209ENST00000498708 ACDQ96AP0 544 aa6.78□□□□□ -1.32
SPTA1-209ENST00000498708 GPAMQ9HCL2 828 aa6.78□□□□□ -1.32
SPTA1-209ENST00000498708 RAI14Q9P0K7 980 aa6.78□□□□□ -1.32
SPTA1-209ENST00000498708 TNNQ9UQP3 1299 aa6.78□□□□□ -1.32
SPTA1-209ENST00000498708 SLC4A7Q9Y6M7 1214 aa6.78□□□□□ -1.32
SPTA1-209ENST00000498708 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.78□□□□□ -1.32
SPTA1-209ENST00000498708 CHD6Q8TD26 2715 aa6.78□□□□□ -1.32
SPTA1-209ENST00000498708 FAM186AA6NE01 2351 aa6.77□□□□□ -1.32
SPTA1-209ENST00000498708 MROH7-TTC4A0A0A0MT08 1334 aa6.77□□□□□ -1.32
SPTA1-209ENST00000498708 SALL1Q9NSC2 1324 aa6.77□□□□□ -1.32
SPTA1-209ENST00000498708 KMT2EQ8IZD2 1858 aa6.77□□□□□ -1.33
SPTA1-209ENST00000498708 CDK5RAP2Q96SN8 1893 aa6.77□□□□□ -1.33
SPTA1-209ENST00000498708 MED19A0JLT2 244 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms