RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 FAM47CQ5HY64 1035 aa14.1□□□□□ -0.15
CNOT4-211ENST00000498534 TJAP1Q5JTD0 557 aa14.1□□□□□ -0.15
CNOT4-211ENST00000498534 B4GALNT3Q6L9W6 998 aa14.1□□□□□ -0.15
CNOT4-211ENST00000498534 SLC30A10Q6XR72 485 aa14.1□□□□□ -0.15
CNOT4-211ENST00000498534 IQCA1Q86XH1 822 aa14.1□□□□□ -0.15
CNOT4-211ENST00000498534 RETREG2Q8NC44 543 aa14.1□□□□□ -0.15
CNOT4-211ENST00000498534 RGS22Q8NE09 1264 aa14.1□□□□□ -0.15
CNOT4-211ENST00000498534 MAF1Q9H063 256 aa14.1□□□□□ -0.15
CNOT4-211ENST00000498534 WNT8AQ9H1J5 351 aa14.1□□□□□ -0.15
CNOT4-211ENST00000498534 TRMT13Q9NUP7 481 aaKnown RBP14.1□□□□□ -0.15
CNOT4-211ENST00000498534 TNKSO95271 1327 aa14.1□□□□□ -0.15
CNOT4-211ENST00000498534 TXNP10599 105 aaKnown RBP14.09□□□□□ -0.15
CNOT4-211ENST00000498534 CYP2C9P11712 490 aa14.09□□□□□ -0.15
CNOT4-211ENST00000498534 ACTN1P12814 892 aa14.09□□□□□ -0.15
CNOT4-211ENST00000498534 TTLL4Q14679 1199 aa14.09□□□□□ -0.15
CNOT4-211ENST00000498534 NBPF20Q3BBV1 942 aa14.09□□□□□ -0.15
CNOT4-211ENST00000498534 USH1GQ495M9 461 aa14.09□□□□□ -0.15
CNOT4-211ENST00000498534 PLCD3Q8N3E9 789 aa14.09□□□□□ -0.15
CNOT4-211ENST00000498534 USP38Q8NB14 1042 aa14.09□□□□□ -0.15
CNOT4-211ENST00000498534 ATXN2LQ8WWM7 1075 aaKnown RBP14.09□□□□□ -0.15
CNOT4-211ENST00000498534 SCLYQ96I15 445 aa14.09□□□□□ -0.15
CNOT4-211ENST00000498534 ZKSCAN3Q9BRR0 538 aa14.09□□□□□ -0.15
CNOT4-211ENST00000498534 NKX2-4Q9H2Z4 354 aa14.09□□□□□ -0.15
CNOT4-211ENST00000498534 TTC28Q96AY4 2481 aa14.09□□□□□ -0.15
CNOT4-211ENST00000498534 A6NJR5 290 aa14.08□□□□□ -0.16
CNOT4-211ENST00000498534 GABBR2O75899 941 aa14.08□□□□□ -0.16
CNOT4-211ENST00000498534 GOLGA8HP0CJ92 632 aa14.08□□□□□ -0.16
CNOT4-211ENST00000498534 ATP2A2P16615 1042 aaKnown RBP14.08□□□□□ -0.16
CNOT4-211ENST00000498534 EDNRBP24530 442 aa14.08□□□□□ -0.16
CNOT4-211ENST00000498534 PTPN11Q06124 597 aaPredicted RBP14.08□□□□□ -0.16
CNOT4-211ENST00000498534 NFRKBQ6P4R8 1299 aa14.08□□□□□ -0.16
CNOT4-211ENST00000498534 DEFB128Q7Z7B8 93 aa14.08□□□□□ -0.16
CNOT4-211ENST00000498534 MCF2L2Q86YR7 1114 aa14.08□□□□□ -0.16
CNOT4-211ENST00000498534 TBC1D10CQ8IV04 446 aa14.08□□□□□ -0.16
CNOT4-211ENST00000498534 UBA5Q9GZZ9 404 aa14.08□□□□□ -0.16
CNOT4-211ENST00000498534 TSPYL2Q9H2G4 693 aaPredicted RBP14.08□□□□□ -0.16
CNOT4-211ENST00000498534 KAT14Q9H8E8 782 aa14.08□□□□□ -0.16
CNOT4-211ENST00000498534 DIAPH3Q9NSV4 1193 aa14.08□□□□□ -0.16
CNOT4-211ENST00000498534 NOD1Q9Y239 953 aa14.08□□□□□ -0.16
CNOT4-211ENST00000498534 PCDHA11Q9Y5I1 949 aa14.08□□□□□ -0.16
CNOT4-211ENST00000498534 HIP1O00291 1037 aa14.07□□□□□ -0.16
CNOT4-211ENST00000498534 KDM4AO75164 1064 aa14.07□□□□□ -0.16
CNOT4-211ENST00000498534 RFC2P35250 354 aa14.07□□□□□ -0.16
CNOT4-211ENST00000498534 RABGGTBP53611 331 aa14.07□□□□□ -0.16
CNOT4-211ENST00000498534 CHMP4BP1P59074 171 aa14.07□□□□□ -0.16
CNOT4-211ENST00000498534 CCDC85BQ15834 202 aaPredicted RBP14.07□□□□□ -0.16
CNOT4-211ENST00000498534 PPP2R2DQ66LE6 453 aa14.07□□□□□ -0.16
CNOT4-211ENST00000498534 CWC27Q6UX04 472 aaKnown RBP14.07□□□□□ -0.16
CNOT4-211ENST00000498534 CHD1LQ86WJ1 897 aa14.07□□□□□ -0.16
CNOT4-211ENST00000498534 SMC5Q8IY18 1101 aa14.07□□□□□ -0.16
CNOT4-211ENST00000498534 PNMA1Q8ND90 353 aa14.07□□□□□ -0.16
CNOT4-211ENST00000498534 NSUN6Q8TEA1 469 aaKnown RBP14.07□□□□□ -0.16
CNOT4-211ENST00000498534 CTNNA3Q9UI47 895 aa14.07□□□□□ -0.16
CNOT4-211ENST00000498534 YBX2Q9Y2T7 364 aaKnown RBP14.07□□□□□ -0.16
CNOT4-211ENST00000498534 CHD9Q3L8U1 2897 aa14.06□□□□□ -0.16
CNOT4-211ENST00000498534 DHX16O60231 1041 aaKnown RBP14.06□□□□□ -0.16
CNOT4-211ENST00000498534 MRPS5P82675 430 aaKnown RBP14.06□□□□□ -0.16
CNOT4-211ENST00000498534 BFSP2Q13515 415 aa14.06□□□□□ -0.16
CNOT4-211ENST00000498534 ADGRE1Q14246 886 aa14.06□□□□□ -0.16
CNOT4-211ENST00000498534 STXBP2Q15833 593 aa14.06□□□□□ -0.16
CNOT4-211ENST00000498534 ASPRV1Q53RT3 343 aa14.06□□□□□ -0.16
CNOT4-211ENST00000498534 TMEM67Q5HYA8 995 aa14.06□□□□□ -0.16
CNOT4-211ENST00000498534 PLEKHM2Q8IWE5 1019 aa14.06□□□□□ -0.16
CNOT4-211ENST00000498534 ADGRF4Q8IZF3 695 aa14.06□□□□□ -0.16
CNOT4-211ENST00000498534 IL27Q8NEV9 243 aa14.06□□□□□ -0.16
CNOT4-211ENST00000498534 ANKS1AQ92625 1134 aa14.06□□□□□ -0.16
CNOT4-211ENST00000498534 COPS5Q92905 334 aa14.06□□□□□ -0.16
CNOT4-211ENST00000498534 IWS1Q96ST2 819 aa14.06□□□□□ -0.16
CNOT4-211ENST00000498534 ZSCAN10Q96SZ4 725 aaPredicted RBP14.06□□□□□ -0.16
CNOT4-211ENST00000498534 FTOQ9C0B1 505 aaKnown RBP eCLIP14.06□□□□□ -0.16
CNOT4-211ENST00000498534 OSBPL3Q9H4L5 887 aa14.06□□□□□ -0.16
CNOT4-211ENST00000498534 VAT1LQ9HCJ6 419 aa14.06□□□□□ -0.16
CNOT4-211ENST00000498534 PRDM6Q9NQX0 595 aa14.06□□□□□ -0.16
CNOT4-211ENST00000498534 THEGQ9P2T0 379 aa14.06□□□□□ -0.16
CNOT4-211ENST00000498534 MRPL11Q9Y3B7 192 aaKnown RBP14.06□□□□□ -0.16
CNOT4-211ENST00000498534 ABCB11O95342 1321 aa14.06□□□□□ -0.16
CNOT4-211ENST00000498534 LRRC37A2A6NM11 1700 aa14.06□□□□□ -0.16
CNOT4-211ENST00000498534 LCTP09848 1927 aa14.05□□□□□ -0.16
CNOT4-211ENST00000498534 GH1P01241 217 aa14.05□□□□□ -0.16
CNOT4-211ENST00000498534 PARP1P09874 1014 aaKnown RBP14.05□□□□□ -0.16
CNOT4-211ENST00000498534 IQCF3P0C7M6 154 aa14.05□□□□□ -0.16
CNOT4-211ENST00000498534 CDC37Q16543 378 aaPredicted RBP14.05□□□□□ -0.16
CNOT4-211ENST00000498534 IMMTQ16891 758 aaKnown RBP14.05□□□□□ -0.16
CNOT4-211ENST00000498534 SEPT14Q6ZU15 432 aa14.05□□□□□ -0.16
CNOT4-211ENST00000498534 CCDC155Q8N6L0 562 aa14.05□□□□□ -0.16
CNOT4-211ENST00000498534 PHOSPHO2Q8TCD6 241 aa14.05□□□□□ -0.16
CNOT4-211ENST00000498534 ASB2Q96Q27 587 aa14.05□□□□□ -0.16
CNOT4-211ENST00000498534 RMDN3Q96TC7 470 aa14.05□□□□□ -0.16
CNOT4-211ENST00000498534 KRT23Q9C075 422 aa14.05□□□□□ -0.16
CNOT4-211ENST00000498534 CPVLQ9H3G5 476 aa14.05□□□□□ -0.16
CNOT4-211ENST00000498534 ZSWIM5Q9P217 1185 aa14.05□□□□□ -0.16
CNOT4-211ENST00000498534 NEDD4P46934 1319 aa14.05□□□□□ -0.16
CNOT4-211ENST00000498534 SPTBN5Q9NRC6 3674 aaKnown RBP14.05□□□□□ -0.16
CNOT4-211ENST00000498534 B4E1Z4 1266 aa14.04□□□□□ -0.16
CNOT4-211ENST00000498534 KIF28PB7ZC32 967 aa14.04□□□□□ -0.16
CNOT4-211ENST00000498534 TNFRSF10AO00220 468 aa14.04□□□□□ -0.16
CNOT4-211ENST00000498534 MYOGP15173 224 aa14.04□□□□□ -0.16
CNOT4-211ENST00000498534 CASTP20810 708 aaKnown RBP14.04□□□□□ -0.16
CNOT4-211ENST00000498534 NUCB1Q02818 461 aa14.04□□□□□ -0.16
CNOT4-211ENST00000498534 PTGISQ16647 500 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms