RNA–Protein interactions for RNA: ENST00000498347.1

FAM3D-205, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 2

Gene FAM3D, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-205ENST00000498347 TRMT2AQ8IZ69 625 aaKnown RBP10.79□□□□□ -0.68
FAM3D-205ENST00000498347 KIFC2Q96AC6 838 aa10.79□□□□□ -0.68
FAM3D-205ENST00000498347 RMDN1Q96DB5 314 aa10.79□□□□□ -0.68
FAM3D-205ENST00000498347 NUP88Q99567 741 aaPredicted RBP10.79□□□□□ -0.68
FAM3D-205ENST00000498347 WDR11Q9BZH6 1224 aa10.79□□□□□ -0.68
FAM3D-205ENST00000498347 DCP1AQ9NPI6 582 aaPredicted RBP10.79□□□□□ -0.68
FAM3D-205ENST00000498347 ACACBO00763 2458 aa10.79□□□□□ -0.68
FAM3D-205ENST00000498347 COL4A6Q14031 1691 aa10.79□□□□□ -0.68
FAM3D-205ENST00000498347 GNAI3P08754 354 aa10.78□□□□□ -0.68
FAM3D-205ENST00000498347 MKRN4PQ13434 485 aaPredicted RBP10.78□□□□□ -0.68
FAM3D-205ENST00000498347 AAMPQ13685 434 aa10.78□□□□□ -0.68
FAM3D-205ENST00000498347 NBR1Q14596 966 aa10.78□□□□□ -0.68
FAM3D-205ENST00000498347 TCTN1Q2MV58 587 aa10.78□□□□□ -0.68
FAM3D-205ENST00000498347 TNNI3KQ59H18 835 aa10.78□□□□□ -0.68
FAM3D-205ENST00000498347 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.78□□□□□ -0.68
FAM3D-205ENST00000498347 FRMD5Q7Z6J6 570 aa10.78□□□□□ -0.68
FAM3D-205ENST00000498347 FBXO16Q8IX29 292 aaPredicted RBP10.78□□□□□ -0.68
FAM3D-205ENST00000498347 MEIS3Q99687 375 aa10.78□□□□□ -0.68
FAM3D-205ENST00000498347 LMAN2LQ9H0V9 348 aa10.78□□□□□ -0.68
FAM3D-205ENST00000498347 IGFLR1Q9H665 355 aa10.78□□□□□ -0.68
FAM3D-205ENST00000498347 ACAD9Q9H845 621 aa10.78□□□□□ -0.68
FAM3D-205ENST00000498347 HOMER2Q9NSB8 354 aa10.78□□□□□ -0.68
FAM3D-205ENST00000498347 FEM1BQ9UK73 627 aa10.78□□□□□ -0.68
FAM3D-205ENST00000498347 FPGT-TNNI3KV9GXZ4 949 aa10.78□□□□□ -0.68
FAM3D-205ENST00000498347 PARP14Q460N5 1801 aa10.78□□□□□ -0.68
FAM3D-205ENST00000498347 DCHS1Q96JQ0 3298 aa10.78□□□□□ -0.68
FAM3D-205ENST00000498347 SIP14410 1827 aa10.77□□□□□ -0.68
FAM3D-205ENST00000498347 A6NJR5 290 aa10.77□□□□□ -0.69
FAM3D-205ENST00000498347 RB1P06400 928 aa10.77□□□□□ -0.69
FAM3D-205ENST00000498347 TKFCQ3LXA3 575 aa10.77□□□□□ -0.69
FAM3D-205ENST00000498347 FBXO11Q86XK2 927 aa10.77□□□□□ -0.69
FAM3D-205ENST00000498347 OR6J1Q8NGC5 347 aa10.77□□□□□ -0.69
FAM3D-205ENST00000498347 MORC4Q8TE76 937 aa10.77□□□□□ -0.69
FAM3D-205ENST00000498347 PPP1R13LQ8WUF5 828 aa10.77□□□□□ -0.69
FAM3D-205ENST00000498347 A1CFQ9NQ94 594 aaKnown RBP10.77□□□□□ -0.69
FAM3D-205ENST00000498347 KMT2EQ8IZD2 1858 aa10.76□□□□□ -0.69
FAM3D-205ENST00000498347 PTPRSQ13332 1948 aa10.76□□□□□ -0.69
FAM3D-205ENST00000498347 RBM47A0AV96 593 aaKnown RBP10.76□□□□□ -0.69
FAM3D-205ENST00000498347 NKRFO15226 690 aaKnown RBP eCLIP10.76□□□□□ -0.69
FAM3D-205ENST00000498347 CKBP12277 381 aa10.76□□□□□ -0.69
FAM3D-205ENST00000498347 ICAM3P32942 547 aa10.76□□□□□ -0.69
FAM3D-205ENST00000498347 RBL2Q08999 1139 aa10.76□□□□□ -0.69
FAM3D-205ENST00000498347 SLFN5Q08AF3 891 aa10.76□□□□□ -0.69
FAM3D-205ENST00000498347 ALDH1L2Q3SY69 923 aa10.76□□□□□ -0.69
FAM3D-205ENST00000498347 MYOCDQ8IZQ8 938 aa10.76□□□□□ -0.69
FAM3D-205ENST00000498347 SDR42E1Q8WUS8 393 aa10.76□□□□□ -0.69
FAM3D-205ENST00000498347 TOP1MTQ969P6 601 aa10.76□□□□□ -0.69
FAM3D-205ENST00000498347 MSLNLQ96KJ4 702 aa10.76□□□□□ -0.69
FAM3D-205ENST00000498347 YME1L1Q96TA2 773 aa10.76□□□□□ -0.69
FAM3D-205ENST00000498347 PHF7Q9BWX1 381 aaPredicted RBP10.76□□□□□ -0.69
FAM3D-205ENST00000498347 NYAP2Q9P242 653 aa10.76□□□□□ -0.69
FAM3D-205ENST00000498347 DDX49Q9Y6V7 483 aaKnown RBP10.76□□□□□ -0.69
FAM3D-205ENST00000498347 RAD50Q92878 1312 aa10.76□□□□□ -0.69
FAM3D-205ENST00000498347 ATRXP46100 2492 aa10.76□□□□□ -0.69
FAM3D-205ENST00000498347 TBX10O75333 385 aa10.75□□□□□ -0.69
FAM3D-205ENST00000498347 LGR5O75473 907 aa10.75□□□□□ -0.69
FAM3D-205ENST00000498347 NDUFB10O96000 172 aa10.75□□□□□ -0.69
FAM3D-205ENST00000498347 BMPR1AP36894 532 aa10.75□□□□□ -0.69
FAM3D-205ENST00000498347 CHMP4BP1P59074 171 aa10.75□□□□□ -0.69
FAM3D-205ENST00000498347 C12orf60Q5U649 245 aa10.75□□□□□ -0.69
FAM3D-205ENST00000498347 GDF6Q6KF10 455 aaPredicted RBP10.75□□□□□ -0.69
FAM3D-205ENST00000498347 C16orf86Q6ZW13 317 aa10.75□□□□□ -0.69
FAM3D-205ENST00000498347 SESTD1Q86VW0 696 aa10.75□□□□□ -0.69
FAM3D-205ENST00000498347 AMOTL1Q8IY63 956 aa10.75□□□□□ -0.69
FAM3D-205ENST00000498347 RPGRIP1Q96KN7 1286 aa10.75□□□□□ -0.69
FAM3D-205ENST00000498347 TRERF1Q96PN7 1200 aa10.75□□□□□ -0.69
FAM3D-205ENST00000498347 CTAGE1Q96RT6 745 aa10.75□□□□□ -0.69
FAM3D-205ENST00000498347 ANTXR1Q9H6X2 564 aa10.75□□□□□ -0.69
FAM3D-205ENST00000498347 ATP8A2Q9NTI2 1148 aa10.75□□□□□ -0.69
FAM3D-205ENST00000498347 RNF146Q9NTX7 359 aa10.75□□□□□ -0.69
FAM3D-205ENST00000498347 PKD1L2Q7Z442 2459 aa10.75□□□□□ -0.69
FAM3D-205ENST00000498347 MYO5AQ9Y4I1 1855 aaKnown RBP10.74□□□□□ -0.69
FAM3D-205ENST00000498347 E9PSI1 815 aa10.74□□□□□ -0.69
FAM3D-205ENST00000498347 GRM6O15303 877 aa10.74□□□□□ -0.69
FAM3D-205ENST00000498347 LINC01565O15544 149 aa10.74□□□□□ -0.69
FAM3D-205ENST00000498347 PDGFBP01127 241 aaPredicted RBP10.74□□□□□ -0.69
FAM3D-205ENST00000498347 GTF2F1P35269 517 aaKnown RBP eCLIP10.74□□□□□ -0.69
FAM3D-205ENST00000498347 NDUFV1P49821 464 aa10.74□□□□□ -0.69
FAM3D-205ENST00000498347 COASYQ13057 564 aa10.74□□□□□ -0.69
FAM3D-205ENST00000498347 PTPN21Q16825 1174 aa10.74□□□□□ -0.69
FAM3D-205ENST00000498347 SLC9C2Q5TAH2 1124 aa10.74□□□□□ -0.69
FAM3D-205ENST00000498347 LRRC47Q8N1G4 583 aaKnown RBP10.74□□□□□ -0.69
FAM3D-205ENST00000498347 DBF4BQ8NFT6 615 aa10.74□□□□□ -0.69
FAM3D-205ENST00000498347 DHX38Q92620 1227 aaKnown RBP10.74□□□□□ -0.69
FAM3D-205ENST00000498347 PPP2R3CQ969Q6 453 aa10.74□□□□□ -0.69
FAM3D-205ENST00000498347 C11orf84Q9BUA3 381 aaPredicted RBP10.74□□□□□ -0.69
FAM3D-205ENST00000498347 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.74□□□□□ -0.69
FAM3D-205ENST00000498347 API5Q9BZZ5 524 aaKnown RBP10.74□□□□□ -0.69
FAM3D-205ENST00000498347 SEMA4AQ9H3S1 761 aa10.74□□□□□ -0.69
FAM3D-205ENST00000498347 SMC4Q9NTJ3 1288 aa10.74□□□□□ -0.69
FAM3D-205ENST00000498347 CYP39A1Q9NYL5 469 aa10.74□□□□□ -0.69
FAM3D-205ENST00000498347 ADD3Q9UEY8 706 aaKnown RBP10.74□□□□□ -0.69
FAM3D-205ENST00000498347 SCN10AQ9Y5Y9 1956 aa10.74□□□□□ -0.69
FAM3D-205ENST00000498347 ZNF292O60281 2723 aa10.73□□□□□ -0.69
FAM3D-205ENST00000498347 LOC102724159A0A0B4J2E5 919 aa10.73□□□□□ -0.69
FAM3D-205ENST00000498347 C5orf67F2Z3F1 127 aa10.73□□□□□ -0.69
FAM3D-205ENST00000498347 ALAS1P13196 640 aa10.73□□□□□ -0.69
FAM3D-205ENST00000498347 PWP2Q15269 919 aaKnown RBP10.73□□□□□ -0.69
FAM3D-205ENST00000498347 TTF1Q15361 905 aaPredicted RBP10.73□□□□□ -0.69
FAM3D-205ENST00000498347 RPAP2Q8IXW5 612 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms