RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 ANKRD33Q7Z3H0 272 aa17.76■□□□□ 0.43
NUP50-219ENST00000497960 TDHQ8IZJ6 230 aa17.76■□□□□ 0.43
NUP50-219ENST00000497960 SAMD3Q8N6K7 520 aa17.76■□□□□ 0.43
NUP50-219ENST00000497960 NEK1Q96PY6 1258 aa17.76■□□□□ 0.43
NUP50-219ENST00000497960 IWS1Q96ST2 819 aa17.76■□□□□ 0.43
NUP50-219ENST00000497960 MYL10Q9BUA6 226 aa17.76■□□□□ 0.43
NUP50-219ENST00000497960 MAP3K20Q9NYL2 800 aaKnown RBP17.76■□□□□ 0.43
NUP50-219ENST00000497960 PCDH10Q9P2E7 1040 aa17.76■□□□□ 0.43
NUP50-219ENST00000497960 SLC12A7Q9Y666 1083 aa17.76■□□□□ 0.43
NUP50-219ENST00000497960 ARVCFO00192 962 aa17.75■□□□□ 0.43
NUP50-219ENST00000497960 PTGS1P23219 599 aa17.75■□□□□ 0.43
NUP50-219ENST00000497960 KRT32Q14532 448 aa17.75■□□□□ 0.43
NUP50-219ENST00000497960 TTLL4Q14679 1199 aa17.75■□□□□ 0.43
NUP50-219ENST00000497960 BRDTQ58F21 947 aaPredicted RBP17.75■□□□□ 0.43
NUP50-219ENST00000497960 CXCL17Q6UXB2 119 aa17.75■□□□□ 0.43
NUP50-219ENST00000497960 SH3RF1Q7Z6J0 888 aa17.75■□□□□ 0.43
NUP50-219ENST00000497960 PIBF1Q8WXW3 757 aa17.75■□□□□ 0.43
NUP50-219ENST00000497960 TMEM39AQ9NV64 488 aa17.75■□□□□ 0.43
NUP50-219ENST00000497960 COL20A1Q9P218 1284 aa17.75■□□□□ 0.43
NUP50-219ENST00000497960 RANBP2P49792 3224 aaKnown RBP17.74■□□□□ 0.43
NUP50-219ENST00000497960 TRIM43BA6NCK2 446 aa17.74■□□□□ 0.43
NUP50-219ENST00000497960 GCOM1H8Y6P7 765 aaPredicted RBP17.74■□□□□ 0.43
NUP50-219ENST00000497960 POLR2MP0CAP2 368 aa17.74■□□□□ 0.43
NUP50-219ENST00000497960 EIF2AK2P19525 551 aaKnown RBP17.74■□□□□ 0.43
NUP50-219ENST00000497960 SMARCA1P28370 1054 aa17.74■□□□□ 0.43
NUP50-219ENST00000497960 HSD17B4P51659 736 aa17.74■□□□□ 0.43
NUP50-219ENST00000497960 GHRHRQ02643 423 aa17.74■□□□□ 0.43
NUP50-219ENST00000497960 STXBP2Q15833 593 aa17.74■□□□□ 0.43
NUP50-219ENST00000497960 TSGA10IPQ3SY00 556 aa17.74■□□□□ 0.43
NUP50-219ENST00000497960 TMEM63BQ5T3F8 832 aa17.74■□□□□ 0.43
NUP50-219ENST00000497960 SYNE3Q6ZMZ3 975 aa17.74■□□□□ 0.43
NUP50-219ENST00000497960 OR6J1Q8NGC5 347 aa17.74■□□□□ 0.43
NUP50-219ENST00000497960 TRIM43Q96BQ3 446 aaPredicted RBP17.74■□□□□ 0.43
NUP50-219ENST00000497960 RRP36Q96EU6 259 aaKnown RBP17.74■□□□□ 0.43
NUP50-219ENST00000497960 SPZ1Q9BXG8 430 aa17.74■□□□□ 0.43
NUP50-219ENST00000497960 LRRC2Q9BYS8 371 aa17.74■□□□□ 0.43
NUP50-219ENST00000497960 SEC63Q9UGP8 760 aaKnown RBP17.74■□□□□ 0.43
NUP50-219ENST00000497960 LRRC37A2A6NM11 1700 aa17.74■□□□□ 0.43
NUP50-219ENST00000497960 OPLAHO14841 1288 aa17.73■□□□□ 0.43
NUP50-219ENST00000497960 KIAA0355O15063 1070 aa17.73■□□□□ 0.43
NUP50-219ENST00000497960 TXNP10599 105 aaKnown RBP17.73■□□□□ 0.43
NUP50-219ENST00000497960 RAG1P15918 1043 aa17.73■□□□□ 0.43
NUP50-219ENST00000497960 CPT1AP50416 773 aa17.73■□□□□ 0.43
NUP50-219ENST00000497960 CDK7P50613 346 aa17.73■□□□□ 0.43
NUP50-219ENST00000497960 SEPT14Q6ZU15 432 aa17.73■□□□□ 0.43
NUP50-219ENST00000497960 DHX32Q7L7V1 743 aaKnown RBP17.73■□□□□ 0.43
NUP50-219ENST00000497960 BADQ92934 168 aa17.73■□□□□ 0.43
NUP50-219ENST00000497960 SEZ6LQ9BYH1 1024 aa17.73■□□□□ 0.43
NUP50-219ENST00000497960 PXMP2Q9NR77 195 aa17.73■□□□□ 0.43
NUP50-219ENST00000497960 POLR3EQ9NVU0 708 aa17.73■□□□□ 0.43
NUP50-219ENST00000497960 TLR3O15455 904 aaKnown RBP17.72■□□□□ 0.43
NUP50-219ENST00000497960 EPB41L2O43491 1005 aaKnown RBP17.72■□□□□ 0.43
NUP50-219ENST00000497960 EIF3JO75822 258 aaKnown RBP17.72■□□□□ 0.43
NUP50-219ENST00000497960 NR3C2P08235 984 aa17.72■□□□□ 0.43
NUP50-219ENST00000497960 HMGB1P09429 215 aaKnown RBP17.72■□□□□ 0.43
NUP50-219ENST00000497960 HOXA13P31271 388 aaPredicted RBP17.72■□□□□ 0.43
NUP50-219ENST00000497960 FAAP100Q0VG06 881 aa17.72■□□□□ 0.43
NUP50-219ENST00000497960 COL9A3Q14050 684 aaPredicted RBP17.72■□□□□ 0.43
NUP50-219ENST00000497960 SGMS1Q86VZ5 419 aa17.72■□□□□ 0.43
NUP50-219ENST00000497960 RASEFQ8IZ41 740 aa17.72■□□□□ 0.43
NUP50-219ENST00000497960 RXRAP19793 462 aa17.71■□□□□ 0.43
NUP50-219ENST00000497960 ITGA7Q13683 1181 aa17.71■□□□□ 0.43
NUP50-219ENST00000497960 FCHSD1Q86WN1 690 aa17.71■□□□□ 0.43
NUP50-219ENST00000497960 MICU3Q86XE3 530 aa17.71■□□□□ 0.43
NUP50-219ENST00000497960 RAB11FIP4Q86YS3 637 aa17.71■□□□□ 0.43
NUP50-219ENST00000497960 FANCBQ8NB91 859 aa17.71■□□□□ 0.43
NUP50-219ENST00000497960 DNAH12Q6ZR08 3092 aa17.71■□□□□ 0.43
NUP50-219ENST00000497960 KPNA6O60684 536 aa17.7■□□□□ 0.42
NUP50-219ENST00000497960 PLEKHA8P1O95397 391 aa17.7■□□□□ 0.42
NUP50-219ENST00000497960 MYL3P08590 195 aa17.7■□□□□ 0.42
NUP50-219ENST00000497960 MYCLP12524 364 aaPredicted RBP17.7■□□□□ 0.42
NUP50-219ENST00000497960 FGD1P98174 961 aa17.7■□□□□ 0.42
NUP50-219ENST00000497960 EXOSC10Q01780 885 aaKnown RBP17.7■□□□□ 0.42
NUP50-219ENST00000497960 ADCK5Q3MIX3 580 aa17.7■□□□□ 0.42
NUP50-219ENST00000497960 LRIT3Q3SXY7 679 aa17.7■□□□□ 0.42
NUP50-219ENST00000497960 CCDC62Q6P9F0 684 aa17.7■□□□□ 0.42
NUP50-219ENST00000497960 SRBD1Q8N5C6 995 aaKnown RBP17.7■□□□□ 0.42
NUP50-219ENST00000497960 COPS5Q92905 334 aa17.7■□□□□ 0.42
NUP50-219ENST00000497960 PDCD2LQ9BRP1 358 aa17.7■□□□□ 0.42
NUP50-219ENST00000497960 SOX1O00570 391 aaPredicted RBP17.69■□□□□ 0.42
NUP50-219ENST00000497960 ARIH2O95376 493 aa17.69■□□□□ 0.42
NUP50-219ENST00000497960 GH1P01241 217 aa17.69■□□□□ 0.42
NUP50-219ENST00000497960 HSPA4P34932 840 aa17.69■□□□□ 0.42
NUP50-219ENST00000497960 FAM126BQ8IXS8 530 aa17.69■□□□□ 0.42
NUP50-219ENST00000497960 SLC43A3Q8NBI5 491 aa17.69■□□□□ 0.42
NUP50-219ENST00000497960 CUL5Q93034 780 aa17.69■□□□□ 0.42
NUP50-219ENST00000497960 TCEANC2Q96MN5 208 aa17.69■□□□□ 0.42
NUP50-219ENST00000497960 MTG1Q9BT17 334 aaPredicted RBP17.69■□□□□ 0.42
NUP50-219ENST00000497960 USP26Q9BXU7 913 aa17.69■□□□□ 0.42
NUP50-219ENST00000497960 TBX21Q9UL17 535 aa17.69■□□□□ 0.42
NUP50-219ENST00000497960 A6NJR5 290 aa17.68■□□□□ 0.42
NUP50-219ENST00000497960 TIMP1P01033 207 aa17.68■□□□□ 0.42
NUP50-219ENST00000497960 ITGB8P26012 769 aa17.68■□□□□ 0.42
NUP50-219ENST00000497960 PSMC6P62333 389 aa17.68■□□□□ 0.42
NUP50-219ENST00000497960 PURAQ00577 322 aaKnown RBP17.68■□□□□ 0.42
NUP50-219ENST00000497960 PGM5Q15124 567 aa17.68■□□□□ 0.42
NUP50-219ENST00000497960 LY6KQ17RY6 165 aa17.68■□□□□ 0.42
NUP50-219ENST00000497960 APOA5Q6Q788 366 aa17.68■□□□□ 0.42
NUP50-219ENST00000497960 TMTC3Q6ZXV5 915 aa17.68■□□□□ 0.42
NUP50-219ENST00000497960 VSIG10LQ86VR7 867 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms