RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 TDRD3Q9H7E2 651 aaKnown RBP12.96□□□□□ -0.33
SNRNP200-208ENST00000497539 RMND1Q9NWS8 449 aa12.96□□□□□ -0.33
SNRNP200-208ENST00000497539 ZNRF3Q9ULT6 936 aa12.96□□□□□ -0.33
SNRNP200-208ENST00000497539 NRDCO43847 1150 aa12.96□□□□□ -0.34
SNRNP200-208ENST00000497539 HOXA7P31268 230 aaPredicted RBP12.96□□□□□ -0.34
SNRNP200-208ENST00000497539 MAP3K10Q02779 954 aa12.96□□□□□ -0.34
SNRNP200-208ENST00000497539 KCNB1Q14721 858 aa12.96□□□□□ -0.34
SNRNP200-208ENST00000497539 RINLQ6ZS11 566 aa12.96□□□□□ -0.34
SNRNP200-208ENST00000497539 GRAMD1CQ8IYS0 662 aa12.96□□□□□ -0.34
SNRNP200-208ENST00000497539 PDILTQ8N807 584 aa12.96□□□□□ -0.34
SNRNP200-208ENST00000497539 IGSF22Q8N9C0 903 aa12.96□□□□□ -0.34
SNRNP200-208ENST00000497539 TMOD2Q9NZR1 351 aa12.96□□□□□ -0.34
SNRNP200-208ENST00000497539 ZNF219Q9P2Y4 722 aaPredicted RBP12.96□□□□□ -0.34
SNRNP200-208ENST00000497539 PSMD14O00487 310 aa12.95□□□□□ -0.34
SNRNP200-208ENST00000497539 EDIL3O43854 480 aa12.95□□□□□ -0.34
SNRNP200-208ENST00000497539 COQ9O75208 318 aa12.95□□□□□ -0.34
SNRNP200-208ENST00000497539 CACNB3P54284 484 aa12.95□□□□□ -0.34
SNRNP200-208ENST00000497539 GYS2P54840 703 aa12.95□□□□□ -0.34
SNRNP200-208ENST00000497539 ICA1Q05084 483 aa12.95□□□□□ -0.34
SNRNP200-208ENST00000497539 NAALADL2Q58DX5 795 aa12.95□□□□□ -0.34
SNRNP200-208ENST00000497539 FAM83AQ86UY5 434 aa12.95□□□□□ -0.34
SNRNP200-208ENST00000497539 REXO1L1PQ8IX06 675 aa12.95□□□□□ -0.34
SNRNP200-208ENST00000497539 TBCKQ8TEA7 893 aa12.95□□□□□ -0.34
SNRNP200-208ENST00000497539 MTRQ99707 1265 aa12.95□□□□□ -0.34
SNRNP200-208ENST00000497539 GPCPD1Q9NPB8 672 aa12.95□□□□□ -0.34
SNRNP200-208ENST00000497539 FANCLQ9NW38 375 aa12.95□□□□□ -0.34
SNRNP200-208ENST00000497539 ZNF70Q9UC06 446 aaPredicted RBP12.95□□□□□ -0.34
SNRNP200-208ENST00000497539 ANKRD33BA6NCL7 494 aa12.95□□□□□ -0.34
SNRNP200-208ENST00000497539 SASH3O75995 380 aa12.95□□□□□ -0.34
SNRNP200-208ENST00000497539 ZRANB2O95218 330 aaKnown RBP eCLIP12.95□□□□□ -0.34
SNRNP200-208ENST00000497539 GCFC2P16383 781 aaKnown RBP12.95□□□□□ -0.34
SNRNP200-208ENST00000497539 TCP10Q12799 353 aa12.95□□□□□ -0.34
SNRNP200-208ENST00000497539 BIRC2Q13490 618 aa12.95□□□□□ -0.34
SNRNP200-208ENST00000497539 SETDB1Q15047 1291 aa12.95□□□□□ -0.34
SNRNP200-208ENST00000497539 SLFN13Q68D06 897 aa12.95□□□□□ -0.34
SNRNP200-208ENST00000497539 DEFB132Q7Z7B7 95 aa12.95□□□□□ -0.34
SNRNP200-208ENST00000497539 RPAINQ86UA6 219 aa12.95□□□□□ -0.34
SNRNP200-208ENST00000497539 CUL5Q93034 780 aa12.95□□□□□ -0.34
SNRNP200-208ENST00000497539 MED15Q96RN5 788 aa12.95□□□□□ -0.34
SNRNP200-208ENST00000497539 KBTBD4Q9NVX7 518 aa12.95□□□□□ -0.34
SNRNP200-208ENST00000497539 PGAP2Q9UHJ9 254 aa12.95□□□□□ -0.34
SNRNP200-208ENST00000497539 LTBP3Q9NS15 1303 aa12.94□□□□□ -0.34
SNRNP200-208ENST00000497539 PPP1R3GB7ZBB8 358 aa12.94□□□□□ -0.34
SNRNP200-208ENST00000497539 MRPL12P52815 198 aaKnown RBP12.94□□□□□ -0.34
SNRNP200-208ENST00000497539 EIF6P56537 245 aaKnown RBP12.94□□□□□ -0.34
SNRNP200-208ENST00000497539 FMR1Q06787 632 aaKnown RBP eCLIP12.94□□□□□ -0.344e-7■■□□□ 14.2
SNRNP200-208ENST00000497539 TTBK2Q6IQ55 1244 aa12.94□□□□□ -0.34
SNRNP200-208ENST00000497539 MOXD1Q6UVY6 613 aa12.94□□□□□ -0.34
SNRNP200-208ENST00000497539 LARGE2Q8N3Y3 721 aa12.94□□□□□ -0.34
SNRNP200-208ENST00000497539 MBOAT7Q96N66 472 aa12.94□□□□□ -0.34
SNRNP200-208ENST00000497539 WDR24Q96S15 920 aa12.94□□□□□ -0.34
SNRNP200-208ENST00000497539 ZSWIM4Q9H7M6 989 aa12.94□□□□□ -0.34
SNRNP200-208ENST00000497539 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.94□□□□□ -0.34
SNRNP200-208ENST00000497539 MTMR7Q9Y216 660 aa12.94□□□□□ -0.34
SNRNP200-208ENST00000497539 RPS6KL1Q9Y6S9 549 aa12.94□□□□□ -0.34
SNRNP200-208ENST00000497539 TADA3O75528 432 aa12.94□□□□□ -0.34
SNRNP200-208ENST00000497539 SEPT2Q15019 361 aa12.94□□□□□ -0.34
SNRNP200-208ENST00000497539 RBM26Q5T8P6 1007 aaKnown RBP12.94□□□□□ -0.34
SNRNP200-208ENST00000497539 SPATA1Q5VX52 437 aa12.94□□□□□ -0.34
SNRNP200-208ENST00000497539 VAT1LQ9HCJ6 419 aa12.94□□□□□ -0.34
SNRNP200-208ENST00000497539 USP17L10C9JJH3 530 aa12.93□□□□□ -0.34
SNRNP200-208ENST00000497539 CCNT1O60563 726 aaKnown RBP12.93□□□□□ -0.34
SNRNP200-208ENST00000497539 PLA2G6O60733 806 aa12.93□□□□□ -0.34
SNRNP200-208ENST00000497539 STAT6P42226 847 aa12.93□□□□□ -0.34
SNRNP200-208ENST00000497539 GNG11P61952 73 aa12.93□□□□□ -0.34
SNRNP200-208ENST00000497539 PDIA5Q14554 519 aa12.93□□□□□ -0.34
SNRNP200-208ENST00000497539 DLGAP5Q15398 846 aa12.93□□□□□ -0.34
SNRNP200-208ENST00000497539 COBLL1Q53SF7 1204 aa12.93□□□□□ -0.34
SNRNP200-208ENST00000497539 TEX35Q5T0J7 233 aa12.93□□□□□ -0.34
SNRNP200-208ENST00000497539 ZNF658Q5TYW1 1059 aaPredicted RBP12.93□□□□□ -0.34
SNRNP200-208ENST00000497539 CDKAL1Q5VV42 579 aa12.93□□□□□ -0.34
SNRNP200-208ENST00000497539 CNNM4Q6P4Q7 775 aa12.93□□□□□ -0.34
SNRNP200-208ENST00000497539 DNAJC14Q6Y2X3 702 aaPredicted RBP12.93□□□□□ -0.34
SNRNP200-208ENST00000497539 VSTM4Q8IW00 320 aa12.93□□□□□ -0.34
SNRNP200-208ENST00000497539 NIM1KQ8IY84 436 aa12.93□□□□□ -0.34
SNRNP200-208ENST00000497539 PAIP2Q9BPZ3 127 aaKnown RBP12.93□□□□□ -0.34
SNRNP200-208ENST00000497539 PIM2Q9P1W9 311 aa12.93□□□□□ -0.34
SNRNP200-208ENST00000497539 MYH7BA7E2Y1 1941 aa12.93□□□□□ -0.34
SNRNP200-208ENST00000497539 ATAD5Q96QE3 1844 aa12.93□□□□□ -0.34
SNRNP200-208ENST00000497539 CYP3A7-CYP3A51PA0A087WV96 503 aa12.93□□□□□ -0.34
SNRNP200-208ENST00000497539 CYP3A7P24462 503 aa12.93□□□□□ -0.34
SNRNP200-208ENST00000497539 ADKP55263 362 aaKnown RBP12.93□□□□□ -0.34
SNRNP200-208ENST00000497539 AP3B2Q13367 1082 aa12.93□□□□□ -0.34
SNRNP200-208ENST00000497539 ZSCAN29Q8IWY8 852 aaPredicted RBP12.93□□□□□ -0.34
SNRNP200-208ENST00000497539 COA7Q96BR5 231 aa12.93□□□□□ -0.34
SNRNP200-208ENST00000497539 ARGLU1Q9NWB6 273 aaPredicted RBP12.93□□□□□ -0.34
SNRNP200-208ENST00000497539 TMEM260Q9NX78 707 aa12.93□□□□□ -0.34
SNRNP200-208ENST00000497539 BIN2Q9UBW5 565 aaPredicted RBP12.93□□□□□ -0.34
SNRNP200-208ENST00000497539 SLC1A4P43007 532 aa12.92□□□□□ -0.34
SNRNP200-208ENST00000497539 AFMP43652 599 aa12.92□□□□□ -0.34
SNRNP200-208ENST00000497539 QRICH1Q2TAL8 776 aa12.92□□□□□ -0.34
SNRNP200-208ENST00000497539 LETM2Q2VYF4 491 aa12.92□□□□□ -0.34
SNRNP200-208ENST00000497539 RRAGBQ5VZM2 374 aa12.92□□□□□ -0.34
SNRNP200-208ENST00000497539 CRYGNQ8WXF5 182 aa12.92□□□□□ -0.34
SNRNP200-208ENST00000497539 CSRNP1Q96S65 589 aa12.92□□□□□ -0.34
SNRNP200-208ENST00000497539 DESI2Q9BSY9 194 aa12.92□□□□□ -0.34
SNRNP200-208ENST00000497539 ZNF277Q9NRM2 450 aaPredicted RBP12.92□□□□□ -0.34
SNRNP200-208ENST00000497539 RWDD2AQ9UIY3 292 aa12.92□□□□□ -0.34
SNRNP200-208ENST00000497539 PPP2R2CQ9Y2T4 447 aa12.92□□□□□ -0.34
SNRNP200-208ENST00000497539 SYNRGQ9UMZ2 1314 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms