RNA–Protein interactions for RNA: ENST00000497440.5

SHROOM3-210, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 611 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-210ENST00000497440 ARIH2O95376 493 aa12.65□□□□□ -0.38
SHROOM3-210ENST00000497440 CD4P01730 458 aa12.65□□□□□ -0.38
SHROOM3-210ENST00000497440 C6orf222P0C671 652 aaPredicted RBP12.65□□□□□ -0.38
SHROOM3-210ENST00000497440 CALM1P0DP23 149 aa12.65□□□□□ -0.38
SHROOM3-210ENST00000497440 CALM2P0DP24 149 aa12.65□□□□□ -0.38
SHROOM3-210ENST00000497440 CALM3P0DP25 149 aa12.65□□□□□ -0.38
SHROOM3-210ENST00000497440 PTGS1P23219 599 aa12.65□□□□□ -0.38
SHROOM3-210ENST00000497440 ITGB8P26012 769 aa12.65□□□□□ -0.38
SHROOM3-210ENST00000497440 KIF5BP33176 963 aa12.65□□□□□ -0.38
SHROOM3-210ENST00000497440 GNAQP50148 359 aa12.65□□□□□ -0.38
SHROOM3-210ENST00000497440 CACNB1Q02641 598 aaPredicted RBP12.65□□□□□ -0.38
SHROOM3-210ENST00000497440 KRT32Q14532 448 aa12.65□□□□□ -0.38
SHROOM3-210ENST00000497440 FSCN1Q16658 493 aaKnown RBP12.65□□□□□ -0.38
SHROOM3-210ENST00000497440 LRIT3Q3SXY7 679 aa12.65□□□□□ -0.38
SHROOM3-210ENST00000497440 GNASQ5JWF2 1037 aa12.65□□□□□ -0.38
SHROOM3-210ENST00000497440 TLK2Q86UE8 772 aa12.65□□□□□ -0.38
SHROOM3-210ENST00000497440 TEX2Q8IWB9 1127 aa12.65□□□□□ -0.38
SHROOM3-210ENST00000497440 FANCBQ8NB91 859 aa12.65□□□□□ -0.38
SHROOM3-210ENST00000497440 SCFD2Q8WU76 684 aa12.65□□□□□ -0.38
SHROOM3-210ENST00000497440 TRIM43Q96BQ3 446 aaPredicted RBP12.65□□□□□ -0.38
SHROOM3-210ENST00000497440 RMDN3Q96TC7 470 aa12.65□□□□□ -0.38
SHROOM3-210ENST00000497440 WDR11Q9BZH6 1224 aa12.65□□□□□ -0.38
SHROOM3-210ENST00000497440 SPC25Q9HBM1 224 aa12.65□□□□□ -0.38
SHROOM3-210ENST00000497440 PXMP2Q9NR77 195 aa12.65□□□□□ -0.38
SHROOM3-210ENST00000497440 FAM217BQ9NTX9 383 aaPredicted RBP12.65□□□□□ -0.38
SHROOM3-210ENST00000497440 TBX21Q9UL17 535 aa12.65□□□□□ -0.38
SHROOM3-210ENST00000497440 SCN10AQ9Y5Y9 1956 aa12.65□□□□□ -0.38
SHROOM3-210ENST00000497440 LTBP2Q14767 1821 aa12.65□□□□□ -0.39
SHROOM3-210ENST00000497440 B4DLN1 442 aa12.64□□□□□ -0.39
SHROOM3-210ENST00000497440 ARVCFO00192 962 aa12.64□□□□□ -0.39
SHROOM3-210ENST00000497440 MEIS2O14770 477 aa12.64□□□□□ -0.39
SHROOM3-210ENST00000497440 DYNC1LI2O43237 492 aaPredicted RBP12.64□□□□□ -0.39
SHROOM3-210ENST00000497440 NR3C2P08235 984 aa12.64□□□□□ -0.39
SHROOM3-210ENST00000497440 HMGB1P09429 215 aaKnown RBP12.64□□□□□ -0.39
SHROOM3-210ENST00000497440 SYN1P17600 705 aa12.64□□□□□ -0.39
SHROOM3-210ENST00000497440 MRPL12P52815 198 aaKnown RBP12.64□□□□□ -0.39
SHROOM3-210ENST00000497440 APOA5Q6Q788 366 aa12.64□□□□□ -0.39
SHROOM3-210ENST00000497440 TMTC3Q6ZXV5 915 aa12.64□□□□□ -0.39
SHROOM3-210ENST00000497440 EEPD1Q7L9B9 569 aa12.64□□□□□ -0.39
SHROOM3-210ENST00000497440 SH3RF1Q7Z6J0 888 aa12.64□□□□□ -0.39
SHROOM3-210ENST00000497440 EMID1Q96A84 441 aaPredicted RBP12.64□□□□□ -0.39
SHROOM3-210ENST00000497440 GLT1D1Q96MS3 346 aa12.64□□□□□ -0.39
SHROOM3-210ENST00000497440 PDCD2LQ9BRP1 358 aa12.64□□□□□ -0.39
SHROOM3-210ENST00000497440 STARD7Q9NQZ5 370 aa12.64□□□□□ -0.39
SHROOM3-210ENST00000497440 DDX41Q9UJV9 622 aaKnown RBP12.64□□□□□ -0.39
SHROOM3-210ENST00000497440 BRPF3Q9ULD4 1205 aa12.64□□□□□ -0.39
SHROOM3-210ENST00000497440 SNX14Q9Y5W7 946 aa12.64□□□□□ -0.39
SHROOM3-210ENST00000497440 KIAA1217Q5T5P2 1943 aa12.64□□□□□ -0.39
SHROOM3-210ENST00000497440 PLEKHA8P1O95397 391 aa12.63□□□□□ -0.39
SHROOM3-210ENST00000497440 HOXD8P13378 290 aaPredicted RBP12.63□□□□□ -0.39
SHROOM3-210ENST00000497440 BEX3Q00994 111 aa12.63□□□□□ -0.39
SHROOM3-210ENST00000497440 PDE4DQ08499 809 aa12.63□□□□□ -0.39
SHROOM3-210ENST00000497440 STXBP2Q15833 593 aa12.63□□□□□ -0.39
SHROOM3-210ENST00000497440 GPR153Q6NV75 609 aa12.63□□□□□ -0.39
SHROOM3-210ENST00000497440 FAM126BQ8IXS8 530 aa12.63□□□□□ -0.39
SHROOM3-210ENST00000497440 CTCFLQ8NI51 663 aaPredicted RBP12.63□□□□□ -0.39
SHROOM3-210ENST00000497440 IL17RAQ96F46 866 aa12.63□□□□□ -0.39
SHROOM3-210ENST00000497440 MPHOSPH6Q99547 160 aaKnown RBP12.63□□□□□ -0.39
SHROOM3-210ENST00000497440 MYL10Q9BUA6 226 aa12.63□□□□□ -0.39
SHROOM3-210ENST00000497440 USP26Q9BXU7 913 aa12.63□□□□□ -0.39
SHROOM3-210ENST00000497440 ATP11BQ9Y2G3 1177 aa12.63□□□□□ -0.39
SHROOM3-210ENST00000497440 SLC12A7Q9Y666 1083 aa12.63□□□□□ -0.39
SHROOM3-210ENST00000497440 NID2Q14112 1375 aa12.63□□□□□ -0.39
SHROOM3-210ENST00000497440 CHD9Q3L8U1 2897 aa12.63□□□□□ -0.39
SHROOM3-210ENST00000497440 CCDC69A6NI79 296 aa12.62□□□□□ -0.39
SHROOM3-210ENST00000497440 DHX16O60231 1041 aaKnown RBP12.62□□□□□ -0.39
SHROOM3-210ENST00000497440 CFBP00751 764 aa12.62□□□□□ -0.39
SHROOM3-210ENST00000497440 NEFLP07196 543 aa12.62□□□□□ -0.39
SHROOM3-210ENST00000497440 CLTBP09497 229 aa12.62□□□□□ -0.39
SHROOM3-210ENST00000497440 TGFB3P10600 412 aa12.62□□□□□ -0.39
SHROOM3-210ENST00000497440 PURAQ00577 322 aaKnown RBP12.62□□□□□ -0.39
SHROOM3-210ENST00000497440 ARHGAP1Q07960 439 aa12.62□□□□□ -0.39
SHROOM3-210ENST00000497440 PPP2R5BQ15173 497 aa12.62□□□□□ -0.39
SHROOM3-210ENST00000497440 CXCL17Q6UXB2 119 aa12.62□□□□□ -0.39
SHROOM3-210ENST00000497440 TDHQ8IZJ6 230 aa12.62□□□□□ -0.39
SHROOM3-210ENST00000497440 LRRC2Q9BYS8 371 aa12.62□□□□□ -0.39
SHROOM3-210ENST00000497440 AP5M1Q9H0R1 490 aa12.62□□□□□ -0.39
SHROOM3-210ENST00000497440 MROH7Q68CQ1 1323 aa12.62□□□□□ -0.39
SHROOM3-210ENST00000497440 A0A0U1RQG5 324 aaPredicted RBP12.61□□□□□ -0.39
SHROOM3-210ENST00000497440 GCOM1H8Y6P7 765 aaPredicted RBP12.61□□□□□ -0.39
SHROOM3-210ENST00000497440 KPNA6O60684 536 aa12.61□□□□□ -0.39
SHROOM3-210ENST00000497440 REC8O95072 547 aa12.61□□□□□ -0.39
SHROOM3-210ENST00000497440 POLR2MP0CAP2 368 aa12.61□□□□□ -0.39
SHROOM3-210ENST00000497440 ICAM3P32942 547 aa12.61□□□□□ -0.39
SHROOM3-210ENST00000497440 MRPS9P82933 396 aaKnown RBP12.61□□□□□ -0.39
SHROOM3-210ENST00000497440 TTLL4Q14679 1199 aa12.61□□□□□ -0.39
SHROOM3-210ENST00000497440 PGM5Q15124 567 aa12.61□□□□□ -0.39
SHROOM3-210ENST00000497440 HOMER1Q86YM7 354 aa12.61□□□□□ -0.39
SHROOM3-210ENST00000497440 RRP36Q96EU6 259 aaKnown RBP12.61□□□□□ -0.39
SHROOM3-210ENST00000497440 TM6SF1Q9BZW5 370 aa12.61□□□□□ -0.39
SHROOM3-210ENST00000497440 ZSWIM6Q9HCJ5 1215 aa12.61□□□□□ -0.39
SHROOM3-210ENST00000497440 SOX1O00570 391 aaPredicted RBP12.6□□□□□ -0.39
SHROOM3-210ENST00000497440 ZEB2O60315 1214 aa12.6□□□□□ -0.39
SHROOM3-210ENST00000497440 STAM2O75886 525 aa12.6□□□□□ -0.39
SHROOM3-210ENST00000497440 TIMP1P01033 207 aa12.6□□□□□ -0.39
SHROOM3-210ENST00000497440 TXNP10599 105 aaKnown RBP12.6□□□□□ -0.39
SHROOM3-210ENST00000497440 RXRAP19793 462 aa12.6□□□□□ -0.39
SHROOM3-210ENST00000497440 CDC27P30260 824 aa12.6□□□□□ -0.39
SHROOM3-210ENST00000497440 HOXA13P31271 388 aaPredicted RBP12.6□□□□□ -0.39
SHROOM3-210ENST00000497440 CPT1AP50416 773 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms