RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-208ENST00000497368 TRIB2Q92519 343 aa6.72□□□□□ -1.33
UBE3C-208ENST00000497368 USP6NLQ92738 828 aa6.72□□□□□ -1.33
UBE3C-208ENST00000497368 CCDC97Q96F63 343 aaPredicted RBP6.72□□□□□ -1.33
UBE3C-208ENST00000497368 C12orf42Q96LP6 360 aa6.72□□□□□ -1.33
UBE3C-208ENST00000497368 EHD4Q9H223 541 aa6.72□□□□□ -1.33
UBE3C-208ENST00000497368 PORCNQ9H237 461 aa6.72□□□□□ -1.33
UBE3C-208ENST00000497368 LRP2BPQ9P2M1 347 aa6.72□□□□□ -1.33
UBE3C-208ENST00000497368 HERC5Q9UII4 1024 aaKnown RBP6.72□□□□□ -1.33
UBE3C-208ENST00000497368 A0A1W2PRG0 241 aa6.71□□□□□ -1.34
UBE3C-208ENST00000497368 SHISA8B8ZZ34 492 aa6.71□□□□□ -1.34
UBE3C-208ENST00000497368 H0YGN5 161 aa6.71□□□□□ -1.34
UBE3C-208ENST00000497368 EFSO43281 561 aa6.71□□□□□ -1.34
UBE3C-208ENST00000497368 OIP5O43482 229 aa6.71□□□□□ -1.34
UBE3C-208ENST00000497368 ADCY3O60266 1144 aa6.71□□□□□ -1.34
UBE3C-208ENST00000497368 LDHCP07864 332 aa6.71□□□□□ -1.34
UBE3C-208ENST00000497368 GJB1P08034 283 aa6.71□□□□□ -1.34
UBE3C-208ENST00000497368 IGFBP4P22692 258 aa6.71□□□□□ -1.34
UBE3C-208ENST00000497368 HOXA7P31268 230 aaPredicted RBP6.71□□□□□ -1.34
UBE3C-208ENST00000497368 FCGRTP55899 365 aa6.71□□□□□ -1.34
UBE3C-208ENST00000497368 MARSP56192 900 aaKnown RBP6.71□□□□□ -1.34
UBE3C-208ENST00000497368 BACE1P56817 501 aa6.71□□□□□ -1.34
UBE3C-208ENST00000497368 GRIN2CQ14957 1233 aa6.71□□□□□ -1.34
UBE3C-208ENST00000497368 GORABQ5T7V8 394 aa6.71□□□□□ -1.34
UBE3C-208ENST00000497368 MAP3K21Q5TCX8 1036 aa6.71□□□□□ -1.34
UBE3C-208ENST00000497368 FASTKD5Q7L8L6 764 aaKnown RBP6.71□□□□□ -1.34
UBE3C-208ENST00000497368 SIAH1Q8IUQ4 282 aa6.71□□□□□ -1.34
UBE3C-208ENST00000497368 GALNT6Q8NCL4 622 aa6.71□□□□□ -1.34
UBE3C-208ENST00000497368 NEDD1Q8NHV4 660 aa6.71□□□□□ -1.34
UBE3C-208ENST00000497368 STK32AQ8WU08 396 aa6.71□□□□□ -1.34
UBE3C-208ENST00000497368 SUSD3Q96L08 255 aa6.71□□□□□ -1.34
UBE3C-208ENST00000497368 ENAMQ9NRM1 1142 aa6.71□□□□□ -1.34
UBE3C-208ENST00000497368 PI4KBQ9UBF8 816 aa6.71□□□□□ -1.34
UBE3C-208ENST00000497368 RBPJLQ9UBG7 517 aa6.71□□□□□ -1.34
UBE3C-208ENST00000497368 GPC6Q9Y625 555 aaPredicted RBP6.71□□□□□ -1.34
UBE3C-208ENST00000497368 ZNF532Q9HCE3 1301 aa6.71□□□□□ -1.34
UBE3C-208ENST00000497368 SMCHD1A6NHR9 2005 aa6.71□□□□□ -1.34
UBE3C-208ENST00000497368 CYP2D7A0A087X1C5 515 aa6.7□□□□□ -1.34
UBE3C-208ENST00000497368 TNPO2O14787 897 aaKnown RBP6.7□□□□□ -1.34
UBE3C-208ENST00000497368 PRKAB2O43741 272 aa6.7□□□□□ -1.34
UBE3C-208ENST00000497368 IDH1O75874 414 aaKnown RBP6.7□□□□□ -1.34
UBE3C-208ENST00000497368 GH2P01242 217 aa6.7□□□□□ -1.34
UBE3C-208ENST00000497368 HERVK_113P62684 666 aa6.7□□□□□ -1.34
UBE3C-208ENST00000497368 OS9Q13438 667 aaPredicted RBP6.7□□□□□ -1.34
UBE3C-208ENST00000497368 CCL14Q16627 93 aa6.7□□□□□ -1.34
UBE3C-208ENST00000497368 CCDC158Q5M9N0 1113 aa6.7□□□□□ -1.34
UBE3C-208ENST00000497368 U2AF1L4Q8WU68 220 aaKnown RBP6.7□□□□□ -1.34
UBE3C-208ENST00000497368 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.7□□□□□ -1.34
UBE3C-208ENST00000497368 SDR42E1Q8WUS8 393 aa6.7□□□□□ -1.34
UBE3C-208ENST00000497368 P2RX7Q99572 595 aaKnown RBP6.7□□□□□ -1.34
UBE3C-208ENST00000497368 DHX36Q9H2U1 1008 aaKnown RBP6.7□□□□□ -1.34
UBE3C-208ENST00000497368 FLRT1Q9NZU1 646 aa6.7□□□□□ -1.34
UBE3C-208ENST00000497368 MARK1Q9P0L2 795 aa6.7□□□□□ -1.34
UBE3C-208ENST00000497368 BTBD7Q9P203 1132 aa6.7□□□□□ -1.34
UBE3C-208ENST00000497368 GDF2Q9UK05 429 aaPredicted RBP6.7□□□□□ -1.34
UBE3C-208ENST00000497368 DNMT3AQ9Y6K1 912 aaPredicted RBP6.7□□□□□ -1.34
UBE3C-208ENST00000497368 PFASO15067 1338 aa6.7□□□□□ -1.34
UBE3C-208ENST00000497368 SALL3Q9BXA9 1300 aa6.7□□□□□ -1.34
UBE3C-208ENST00000497368 UNC80Q8N2C7 3258 aa6.7□□□□□ -1.34
UBE3C-208ENST00000497368 ROBO3Q96MS0 1386 aa6.69□□□□□ -1.34
UBE3C-208ENST00000497368 PRUNE2Q8WUY3 3088 aa6.69□□□□□ -1.34
UBE3C-208ENST00000497368 GOLIM4O00461 696 aa6.69□□□□□ -1.34
UBE3C-208ENST00000497368 FOXP2O15409 715 aa6.69□□□□□ -1.34
UBE3C-208ENST00000497368 SMARCA5O60264 1052 aaPredicted RBP6.69□□□□□ -1.34
UBE3C-208ENST00000497368 IGSF3O75054 1194 aa6.69□□□□□ -1.34
UBE3C-208ENST00000497368 ASNSP08243 561 aa6.69□□□□□ -1.34
UBE3C-208ENST00000497368 ARAFP10398 606 aa6.69□□□□□ -1.34
UBE3C-208ENST00000497368 VCAM1P19320 739 aa6.69□□□□□ -1.34
UBE3C-208ENST00000497368 WEE1P30291 646 aa6.69□□□□□ -1.34
UBE3C-208ENST00000497368 ADD2P35612 726 aa6.69□□□□□ -1.34
UBE3C-208ENST00000497368 GSK3AP49840 483 aa6.69□□□□□ -1.34
UBE3C-208ENST00000497368 ERVK-24P63145 666 aa6.69□□□□□ -1.34
UBE3C-208ENST00000497368 SFSWAPQ12872 951 aaKnown RBP6.69□□□□□ -1.34
UBE3C-208ENST00000497368 KIF22Q14807 665 aa6.69□□□□□ -1.34
UBE3C-208ENST00000497368 TSHZ3Q63HK5 1081 aa6.69□□□□□ -1.34
UBE3C-208ENST00000497368 GOLGA6L1Q8N7Z2 621 aa6.69□□□□□ -1.34
UBE3C-208ENST00000497368 RAET1EQ8TD07 263 aa6.69□□□□□ -1.34
UBE3C-208ENST00000497368 SMCR8Q8TEV9 937 aaPredicted RBP6.69□□□□□ -1.34
UBE3C-208ENST00000497368 EDARADDQ8WWZ3 215 aa6.69□□□□□ -1.34
UBE3C-208ENST00000497368 PRIMPOLQ96LW4 560 aa6.69□□□□□ -1.34
UBE3C-208ENST00000497368 CEP63Q96MT8 703 aa6.69□□□□□ -1.34
UBE3C-208ENST00000497368 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.69□□□□□ -1.34
UBE3C-208ENST00000497368 ARMT1Q9H993 441 aa6.69□□□□□ -1.34
UBE3C-208ENST00000497368 EPB41L4AQ9HCS5 686 aaPredicted RBP6.69□□□□□ -1.34
UBE3C-208ENST00000497368 DCP1AQ9NPI6 582 aaPredicted RBP6.69□□□□□ -1.34
UBE3C-208ENST00000497368 SOX1O00570 391 aaPredicted RBP6.68□□□□□ -1.34
UBE3C-208ENST00000497368 FARP2O94887 1054 aaPredicted RBP6.68□□□□□ -1.34
UBE3C-208ENST00000497368 SGPL1O95470 568 aa6.68□□□□□ -1.34
UBE3C-208ENST00000497368 BAG3O95817 575 aa6.68□□□□□ -1.34
UBE3C-208ENST00000497368 AKR1B1P15121 316 aa6.68□□□□□ -1.34
UBE3C-208ENST00000497368 IRS1P35568 1242 aa6.68□□□□□ -1.34
UBE3C-208ENST00000497368 GCLCP48506 637 aaPredicted RBP6.68□□□□□ -1.34
UBE3C-208ENST00000497368 PCBP4P57723 403 aaKnown RBP6.68□□□□□ -1.34
UBE3C-208ENST00000497368 TYRO3Q06418 890 aa6.68□□□□□ -1.34
UBE3C-208ENST00000497368 KCNMA1Q12791 1236 aa6.68□□□□□ -1.34
UBE3C-208ENST00000497368 SEPT2Q15019 361 aa6.68□□□□□ -1.34
UBE3C-208ENST00000497368 ZYXQ15942 572 aaKnown RBP6.68□□□□□ -1.34
UBE3C-208ENST00000497368 LBX2Q6XYB7 198 aa6.68□□□□□ -1.34
UBE3C-208ENST00000497368 SLCO4C1Q6ZQN7 724 aa6.68□□□□□ -1.34
UBE3C-208ENST00000497368 NBPF11Q86T75 865 aa6.68□□□□□ -1.34
UBE3C-208ENST00000497368 ERC1Q8IUD2 1116 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms