RNA–Protein interactions for RNA: ENST00000497282.1

EFNA1-205, Transcript of ephrin A1, human

TSL 2

Gene EFNA1, Length 719 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFNA1-205	ENST00000497282	POLR2M	P0CAP2	368 aa		9.26	□□□□□ -0.93
EFNA1-205	ENST00000497282	EIF2AK2	P19525	551 aa	Known RBP	9.26	□□□□□ -0.93
EFNA1-205	ENST00000497282	CNGA1	P29973	690 aa		9.26	□□□□□ -0.93
EFNA1-205	ENST00000497282	ACVR2B	Q13705	512 aa		9.26	□□□□□ -0.93
EFNA1-205	ENST00000497282	PGM5	Q15124	567 aa		9.26	□□□□□ -0.93
EFNA1-205	ENST00000497282	TMEM63B	Q5T3F8	832 aa		9.26	□□□□□ -0.93
EFNA1-205	ENST00000497282	TAPT1	Q6NXT6	567 aa		9.26	□□□□□ -0.93
EFNA1-205	ENST00000497282	FCHSD1	Q86WN1	690 aa		9.26	□□□□□ -0.93
EFNA1-205	ENST00000497282	SAMD3	Q8N6K7	520 aa		9.26	□□□□□ -0.93
EFNA1-205	ENST00000497282	ZNF713	Q8N859	430 aa	Predicted RBP	9.26	□□□□□ -0.93
EFNA1-205	ENST00000497282	NSUN7	Q8NE18	718 aa	Known RBP	9.26	□□□□□ -0.93
EFNA1-205	ENST00000497282	RMDN3	Q96TC7	470 aa		9.26	□□□□□ -0.93
EFNA1-205	ENST00000497282	PDCD2L	Q9BRP1	358 aa		9.26	□□□□□ -0.93
EFNA1-205	ENST00000497282	ABHD16B	Q9H3Z7	469 aa		9.26	□□□□□ -0.93
EFNA1-205	ENST00000497282	PDGFC	Q9NRA1	345 aa		9.26	□□□□□ -0.93
EFNA1-205	ENST00000497282	MAP3K20	Q9NYL2	800 aa	Known RBP	9.26	□□□□□ -0.93
EFNA1-205	ENST00000497282	VPS54	Q9P1Q0	977 aa		9.26	□□□□□ -0.93
EFNA1-205	ENST00000497282	RBM27	Q9P2N5	1060 aa	Known RBP	9.26	□□□□□ -0.93
EFNA1-205	ENST00000497282	NRBP1	Q9UHY1	535 aa		9.26	□□□□□ -0.93
EFNA1-205	ENST00000497282	LIMCH1	Q9UPQ0	1083 aa		9.26	□□□□□ -0.93
EFNA1-205	ENST00000497282	CNPY2	Q9Y2B0	182 aa		9.26	□□□□□ -0.93
EFNA1-205	ENST00000497282	STK36	Q9NRP7	1315 aa		9.26	□□□□□ -0.93
EFNA1-205	ENST00000497282	ALPK3	Q96L96	1907 aa		9.25	□□□□□ -0.93
EFNA1-205	ENST00000497282	LOC102724159	A0A0B4J2E5	919 aa		9.25	□□□□□ -0.93
EFNA1-205	ENST00000497282	ESYT2	A0FGR8	921 aa		9.25	□□□□□ -0.93
EFNA1-205	ENST00000497282	SMCO2	A6NFE2	343 aa		9.25	□□□□□ -0.93
EFNA1-205	ENST00000497282	JAK2	O60674	1132 aa		9.25	□□□□□ -0.93
EFNA1-205	ENST00000497282	DEXI	O95424	95 aa		9.25	□□□□□ -0.93
EFNA1-205	ENST00000497282	FDPS	P14324	419 aa	Known RBP	9.25	□□□□□ -0.93
EFNA1-205	ENST00000497282	AKR1A1	P14550	325 aa		9.25	□□□□□ -0.93
EFNA1-205	ENST00000497282	ADCYAP1R1	P41586	468 aa		9.25	□□□□□ -0.93
EFNA1-205	ENST00000497282	CLK2	P49760	499 aa	Known RBP	9.25	□□□□□ -0.93
EFNA1-205	ENST00000497282	MNX1	P50219	401 aa	Predicted RBP	9.25	□□□□□ -0.93
EFNA1-205	ENST00000497282	IRX5	P78411	483 aa	Predicted RBP	9.25	□□□□□ -0.93
EFNA1-205	ENST00000497282	PDE4D	Q08499	809 aa		9.25	□□□□□ -0.93
EFNA1-205	ENST00000497282	SSRP1	Q08945	709 aa	Known RBP	9.25	□□□□□ -0.93
EFNA1-205	ENST00000497282	PWP2	Q15269	919 aa	Known RBP	9.25	□□□□□ -0.93
EFNA1-205	ENST00000497282	CCDC144B	Q3MJ40	725 aa		9.25	□□□□□ -0.93
EFNA1-205	ENST00000497282	GJC2	Q5T442	439 aa	Predicted RBP	9.25	□□□□□ -0.93
EFNA1-205	ENST00000497282	ARHGEF16	Q5VV41	709 aa		9.25	□□□□□ -0.93
EFNA1-205	ENST00000497282	CCDC83	Q8IWF9	413 aa		9.25	□□□□□ -0.93
EFNA1-205	ENST00000497282	TRIM22	Q8IYM9	498 aa		9.25	□□□□□ -0.93
EFNA1-205	ENST00000497282	SMARCC2	Q8TAQ2	1214 aa		9.25	□□□□□ -0.93
EFNA1-205	ENST00000497282	NSUN6	Q8TEA1	469 aa	Known RBP	9.25	□□□□□ -0.93
EFNA1-205	ENST00000497282	ZFP91	Q96JP5	570 aa	Predicted RBP	9.25	□□□□□ -0.93
EFNA1-205	ENST00000497282	PGBD1	Q96JS3	809 aa		9.25	□□□□□ -0.93
EFNA1-205	ENST00000497282	ZMYND12	Q9H0C1	365 aa		9.25	□□□□□ -0.93
EFNA1-205	ENST00000497282	PSTPIP2	Q9H939	334 aa		9.25	□□□□□ -0.93
EFNA1-205	ENST00000497282	RIC8A	Q9NPQ8	531 aa		9.25	□□□□□ -0.93
EFNA1-205	ENST00000497282	GJB4	Q9NTQ9	266 aa		9.25	□□□□□ -0.93
EFNA1-205	ENST00000497282	OGDHL	Q9ULD0	1010 aa		9.25	□□□□□ -0.93
EFNA1-205	ENST00000497282	CENPF	P49454	3210 aa		9.24	□□□□□ -0.93
EFNA1-205	ENST00000497282	DOCK5	Q9H7D0	1870 aa		9.24	□□□□□ -0.93
EFNA1-205	ENST00000497282	MYADML2	A6NDP7	307 aa		9.24	□□□□□ -0.93
EFNA1-205	ENST00000497282	MSC	O60682	206 aa		9.24	□□□□□ -0.93
EFNA1-205	ENST00000497282	RGS20	O76081	388 aa		9.24	□□□□□ -0.93
EFNA1-205	ENST00000497282	ARIH2	O95376	493 aa		9.24	□□□□□ -0.93
EFNA1-205	ENST00000497282	NR3C2	P08235	984 aa		9.24	□□□□□ -0.93
EFNA1-205	ENST00000497282	ADCY7	P51828	1080 aa		9.24	□□□□□ -0.93
EFNA1-205	ENST00000497282	AKAP17A	Q02040	695 aa	Known RBP	9.24	□□□□□ -0.93
EFNA1-205	ENST00000497282	NPY5R	Q15761	445 aa		9.24	□□□□□ -0.93
EFNA1-205	ENST00000497282	IFFO2	Q5TF58	517 aa		9.24	□□□□□ -0.93
EFNA1-205	ENST00000497282	CPLX2	Q6PUV4	134 aa	Known RBP	9.24	□□□□□ -0.93
EFNA1-205	ENST00000497282	UBE2Q1	Q7Z7E8	422 aa		9.24	□□□□□ -0.93
EFNA1-205	ENST00000497282	RASGRP4	Q8TDF6	673 aa		9.24	□□□□□ -0.93
EFNA1-205	ENST00000497282	DIS3L	Q8TF46	1054 aa	Known RBP	9.24	□□□□□ -0.93
EFNA1-205	ENST00000497282	CUL5	Q93034	780 aa		9.24	□□□□□ -0.93
EFNA1-205	ENST00000497282	IWS1	Q96ST2	819 aa		9.24	□□□□□ -0.93
EFNA1-205	ENST00000497282	VTA1	Q9NP79	307 aa		9.24	□□□□□ -0.93
EFNA1-205	ENST00000497282	TMEM260	Q9NX78	707 aa		9.24	□□□□□ -0.93
EFNA1-205	ENST00000497282	FAM184B	Q9ULE4	1060 aa		9.24	□□□□□ -0.93
EFNA1-205	ENST00000497282	MYH7B	A7E2Y1	1941 aa		9.24	□□□□□ -0.93
EFNA1-205	ENST00000497282	SYNRG	Q9UMZ2	1314 aa		9.24	□□□□□ -0.93
EFNA1-205	ENST00000497282	BRCA2	P51587	3418 aa		9.24	□□□□□ -0.93
EFNA1-205	ENST00000497282	RBM47	A0AV96	593 aa	Known RBP	9.23	□□□□□ -0.93
EFNA1-205	ENST00000497282	CTAGE5	O15320	804 aa		9.23	□□□□□ -0.93
EFNA1-205	ENST00000497282	ST18	O60284	1047 aa		9.23	□□□□□ -0.93
EFNA1-205	ENST00000497282	ADAMTS4	O75173	837 aa		9.23	□□□□□ -0.93
EFNA1-205	ENST00000497282	CDKL5	O76039	1030 aa		9.23	□□□□□ -0.93
EFNA1-205	ENST00000497282	PGK1	P00558	417 aa		9.23	□□□□□ -0.93
EFNA1-205	ENST00000497282	TFRC	P02786	760 aa	Known RBP	9.23	□□□□□ -0.93
EFNA1-205	ENST00000497282	RARB	P10826	455 aa		9.23	□□□□□ -0.93
EFNA1-205	ENST00000497282	MYCL	P12524	364 aa	Predicted RBP	9.23	□□□□□ -0.93
EFNA1-205	ENST00000497282	SMPD1	P17405	629 aa		9.23	□□□□□ -0.93
EFNA1-205	ENST00000497282	MRPS9	P82933	396 aa	Known RBP	9.23	□□□□□ -0.93
EFNA1-205	ENST00000497282	TNFAIP2	Q03169	654 aa		9.23	□□□□□ -0.93
EFNA1-205	ENST00000497282	STXBP2	Q15833	593 aa		9.23	□□□□□ -0.93
EFNA1-205	ENST00000497282	CCDC148	Q8NFR7	591 aa		9.23	□□□□□ -0.93
EFNA1-205	ENST00000497282	ZSCAN31	Q96LW9	406 aa	Predicted RBP	9.23	□□□□□ -0.93
EFNA1-205	ENST00000497282	ANO3	Q9BYT9	981 aa		9.23	□□□□□ -0.93
EFNA1-205	ENST00000497282	XPNPEP3	Q9NQH7	507 aa		9.23	□□□□□ -0.93
EFNA1-205	ENST00000497282	SH2B1	Q9NRF2	756 aa	Predicted RBP	9.23	□□□□□ -0.93
EFNA1-205	ENST00000497282	ORC3	Q9UBD5	711 aa	Predicted RBP	9.23	□□□□□ -0.93
EFNA1-205	ENST00000497282	PCDHA6	Q9UN73	950 aa		9.23	□□□□□ -0.93
EFNA1-205	ENST00000497282	GNE	Q9Y223	722 aa	Known RBP	9.23	□□□□□ -0.93
EFNA1-205	ENST00000497282	PCDHA8	Q9Y5H6	950 aa		9.23	□□□□□ -0.93
EFNA1-205	ENST00000497282	SPDYE3	A6NKU9	549 aa		9.22	□□□□□ -0.93
EFNA1-205	ENST00000497282	DUSP11	O75319	330 aa	Known RBP	9.22	□□□□□ -0.93
EFNA1-205	ENST00000497282	FARP2	O94887	1054 aa	Predicted RBP	9.22	□□□□□ -0.93
EFNA1-205	ENST00000497282	CCND2	P30279	289 aa		9.22	□□□□□ -0.93

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