RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 YBX1P67809 324 aaKnown RBP5.84□□□□□ -1.47
SMC4-225ENST00000497203 PRSS53Q2L4Q9 553 aa5.84□□□□□ -1.47
SMC4-225ENST00000497203 NLGN2Q8NFZ4 835 aa5.84□□□□□ -1.47
SMC4-225ENST00000497203 TMX1Q9H3N1 280 aa5.84□□□□□ -1.47
SMC4-225ENST00000497203 PDLIM7Q9NR12 457 aa5.84□□□□□ -1.47
SMC4-225ENST00000497203 FANCLQ9NW38 375 aa5.84□□□□□ -1.47
SMC4-225ENST00000497203 KLHL14Q9P2G3 628 aa5.84□□□□□ -1.47
SMC4-225ENST00000497203 GULP1Q9UBP9 304 aa5.84□□□□□ -1.47
SMC4-225ENST00000497203 FBLN5Q9UBX5 448 aa5.84□□□□□ -1.47
SMC4-225ENST00000497203 C7orf72A4D263 438 aa5.83□□□□□ -1.48
SMC4-225ENST00000497203 ETV2O00321 342 aaPredicted RBP5.83□□□□□ -1.48
SMC4-225ENST00000497203 PEX10O60683 326 aa5.83□□□□□ -1.48
SMC4-225ENST00000497203 MPOP05164 745 aa5.83□□□□□ -1.48
SMC4-225ENST00000497203 SCG5P05408 212 aa5.83□□□□□ -1.48
SMC4-225ENST00000497203 HMGB1P09429 215 aaKnown RBP5.83□□□□□ -1.48
SMC4-225ENST00000497203 HOXC12P31275 282 aa5.83□□□□□ -1.48
SMC4-225ENST00000497203 GFRA1P56159 465 aa5.83□□□□□ -1.48
SMC4-225ENST00000497203 HSP90AA2PQ14568 343 aaPredicted RBP5.83□□□□□ -1.48
SMC4-225ENST00000497203 RAB3GAP1Q15042 981 aa5.83□□□□□ -1.48
SMC4-225ENST00000497203 INF2Q27J81 1249 aa5.83□□□□□ -1.48
SMC4-225ENST00000497203 BICRALQ6AI39 1079 aa5.83□□□□□ -1.48
SMC4-225ENST00000497203 ZBTB38Q8NAP3 1195 aaPredicted RBP5.83□□□□□ -1.48
SMC4-225ENST00000497203 KREMEN2Q8NCW0 462 aa5.83□□□□□ -1.48
SMC4-225ENST00000497203 IPO9Q96P70 1041 aaKnown RBP5.83□□□□□ -1.48
SMC4-225ENST00000497203 PUS7Q96PZ0 661 aaKnown RBP5.83□□□□□ -1.48
SMC4-225ENST00000497203 MMP19Q99542 508 aa5.83□□□□□ -1.48
SMC4-225ENST00000497203 SGPP1Q9BX95 441 aa5.83□□□□□ -1.48
SMC4-225ENST00000497203 TMEFF2Q9UIK5 374 aaPredicted RBP5.83□□□□□ -1.48
SMC4-225ENST00000497203 RWDD3Q9Y3V2 267 aa5.83□□□□□ -1.48
SMC4-225ENST00000497203 PTCH2Q9Y6C5 1203 aa5.83□□□□□ -1.48
SMC4-225ENST00000497203 SBNO2Q9Y2G9 1366 aa5.82□□□□□ -1.48
SMC4-225ENST00000497203 NCANO14594 1321 aa5.82□□□□□ -1.48
SMC4-225ENST00000497203 TRBV23OR9-2A0A075B6M9 112 aa5.82□□□□□ -1.48
SMC4-225ENST00000497203 A0A1W2PQJ5 194 aa5.82□□□□□ -1.48
SMC4-225ENST00000497203 ESYT3A0FGR9 886 aa5.82□□□□□ -1.48
SMC4-225ENST00000497203 TSPAN15O95858 294 aa5.82□□□□□ -1.48
SMC4-225ENST00000497203 DBHP09172 617 aa5.82□□□□□ -1.48
SMC4-225ENST00000497203 C1QTNF9P0C862 333 aa5.82□□□□□ -1.48
SMC4-225ENST00000497203 VIPR1P32241 457 aa5.82□□□□□ -1.48
SMC4-225ENST00000497203 KCNJ6P48051 423 aa5.82□□□□□ -1.48
SMC4-225ENST00000497203 SRSF3P84103 164 aaKnown RBP5.82□□□□□ -1.48
SMC4-225ENST00000497203 SQSTM1Q13501 440 aa5.82□□□□□ -1.48
SMC4-225ENST00000497203 DENND5AQ6IQ26 1287 aa5.82□□□□□ -1.48
SMC4-225ENST00000497203 RPTNQ6XPR3 784 aa5.82□□□□□ -1.48
SMC4-225ENST00000497203 C16orf86Q6ZW13 317 aa5.82□□□□□ -1.48
SMC4-225ENST00000497203 CCDC103Q8IW40 242 aa5.82□□□□□ -1.48
SMC4-225ENST00000497203 TMEM145Q8NBT3 493 aa5.82□□□□□ -1.48
SMC4-225ENST00000497203 DPF3Q92784 378 aa5.82□□□□□ -1.48
SMC4-225ENST00000497203 KCNN1Q92952 543 aa5.82□□□□□ -1.48
SMC4-225ENST00000497203 C1orf159Q96HA4 380 aa5.82□□□□□ -1.48
SMC4-225ENST00000497203 PPP1R16BQ96T49 567 aa5.82□□□□□ -1.48
SMC4-225ENST00000497203 MTA3Q9BTC8 594 aa5.82□□□□□ -1.48
SMC4-225ENST00000497203 GCM1Q9NP62 436 aa5.82□□□□□ -1.48
SMC4-225ENST00000497203 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.82□□□□□ -1.48
SMC4-225ENST00000497203 TRAV20A0A0B4J274 112 aa5.81□□□□□ -1.48
SMC4-225ENST00000497203 TEX51A0A1B0GUA7 166 aa5.81□□□□□ -1.48
SMC4-225ENST00000497203 HRKO00198 91 aa5.81□□□□□ -1.48
SMC4-225ENST00000497203 PRRG2O14669 202 aa5.81□□□□□ -1.48
SMC4-225ENST00000497203 SRGAP3O43295 1099 aa5.81□□□□□ -1.48
SMC4-225ENST00000497203 NPHS1O60500 1241 aa5.81□□□□□ -1.48
SMC4-225ENST00000497203 FAM153BP0C7A2 387 aa5.81□□□□□ -1.48
SMC4-225ENST00000497203 CBX2Q14781 532 aaPredicted RBP5.81□□□□□ -1.48
SMC4-225ENST00000497203 TCEA2Q15560 299 aa5.81□□□□□ -1.48
SMC4-225ENST00000497203 RNF187Q5TA31 235 aaPredicted RBP5.81□□□□□ -1.48
SMC4-225ENST00000497203 ATG14Q6ZNE5 492 aa5.81□□□□□ -1.48
SMC4-225ENST00000497203 LZTR1Q8N653 840 aa5.81□□□□□ -1.48
SMC4-225ENST00000497203 CCDC140Q96MF4 163 aa5.81□□□□□ -1.48
SMC4-225ENST00000497203 FEZ1Q99689 392 aa5.81□□□□□ -1.48
SMC4-225ENST00000497203 CDC6Q99741 560 aa5.81□□□□□ -1.48
SMC4-225ENST00000497203 AARSD1Q9BTE6 412 aaKnown RBP5.81□□□□□ -1.48
SMC4-225ENST00000497203 IER2Q9BTL4 223 aa5.81□□□□□ -1.48
SMC4-225ENST00000497203 KANSL2Q9H9L4 492 aa5.81□□□□□ -1.48
SMC4-225ENST00000497203 ARHGEF4Q9NR80 690 aa5.81□□□□□ -1.48
SMC4-225ENST00000497203 MBD1Q9UIS9 605 aaPredicted RBP5.81□□□□□ -1.48
SMC4-225ENST00000497203 HCFC2Q9Y5Z7 792 aa5.81□□□□□ -1.48
SMC4-225ENST00000497203 NFIBO00712 420 aa5.8□□□□□ -1.48
SMC4-225ENST00000497203 ADCY3O60266 1144 aa5.8□□□□□ -1.48
SMC4-225ENST00000497203 SEMA7AO75326 666 aa5.8□□□□□ -1.48
SMC4-225ENST00000497203 CPP00450 1065 aa5.8□□□□□ -1.48
SMC4-225ENST00000497203 CYBBP04839 570 aa5.8□□□□□ -1.48
SMC4-225ENST00000497203 TMEM253P0C7T8 217 aa5.8□□□□□ -1.48
SMC4-225ENST00000497203 MED14OSP0DP75 135 aa5.8□□□□□ -1.48
SMC4-225ENST00000497203 GLI4P10075 376 aa5.8□□□□□ -1.48
SMC4-225ENST00000497203 GLDCP23378 1020 aa5.8□□□□□ -1.48
SMC4-225ENST00000497203 RAP1GAPP47736 663 aa5.8□□□□□ -1.48
SMC4-225ENST00000497203 DLG4P78352 724 aa5.8□□□□□ -1.48
SMC4-225ENST00000497203 PLEKHN1Q494U1 663 aaPredicted RBP5.8□□□□□ -1.48
SMC4-225ENST00000497203 SLC35F1Q5T1Q4 408 aa5.8□□□□□ -1.48
SMC4-225ENST00000497203 YOD1Q5VVQ6 348 aaPredicted RBP5.8□□□□□ -1.48
SMC4-225ENST00000497203 TMEM132EQ6IEE7 984 aa5.8□□□□□ -1.48
SMC4-225ENST00000497203 PAQR3Q6TCH7 311 aa5.8□□□□□ -1.48
SMC4-225ENST00000497203 TMC6Q7Z403 805 aa5.8□□□□□ -1.48
SMC4-225ENST00000497203 KIAA0907Q7Z7F0 614 aaPredicted RBP5.8□□□□□ -1.48
SMC4-225ENST00000497203 C1QL4Q86Z23 238 aa5.8□□□□□ -1.48
SMC4-225ENST00000497203 PPIL6Q8IXY8 311 aa5.8□□□□□ -1.48
SMC4-225ENST00000497203 CNTD2Q9H8S5 307 aa5.8□□□□□ -1.48
SMC4-225ENST00000497203 RXFP1Q9HBX9 757 aa5.8□□□□□ -1.48
SMC4-225ENST00000497203 SIRT5Q9NXA8 310 aa5.8□□□□□ -1.48
SMC4-225ENST00000497203 PRKAB1Q9Y478 270 aa5.8□□□□□ -1.48
SMC4-225ENST00000497203 ZC3H12DA2A288 527 aaKnown RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms