RNA–Protein interactions for RNA: ENST00000496907.1

HMGCL-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 858 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-206ENST00000496907 FCER1AP12319 257 aa7.03□□□□□ -1.28
HMGCL-206ENST00000496907 XRCC5P13010 732 aaKnown RBP7.03□□□□□ -1.28
HMGCL-206ENST00000496907 XBP1P17861 261 aa7.03□□□□□ -1.28
HMGCL-206ENST00000496907 PDIA3P30101 505 aaKnown RBP7.03□□□□□ -1.28
HMGCL-206ENST00000496907 KCTD2Q14681 263 aa7.03□□□□□ -1.28
HMGCL-206ENST00000496907 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.03□□□□□ -1.28
HMGCL-206ENST00000496907 FBXO11Q86XK2 927 aa7.03□□□□□ -1.28
HMGCL-206ENST00000496907 CLEC10AQ8IUN9 316 aa7.03□□□□□ -1.28
HMGCL-206ENST00000496907 MSL3Q8N5Y2 521 aaKnown RBP7.03□□□□□ -1.28
HMGCL-206ENST00000496907 ANKRD13CQ8N6S4 541 aa7.03□□□□□ -1.28
HMGCL-206ENST00000496907 ANKLE1Q8NAG6 615 aa7.03□□□□□ -1.28
HMGCL-206ENST00000496907 NUDT12Q9BQG2 462 aa7.03□□□□□ -1.28
HMGCL-206ENST00000496907 LLPHQ9BRT6 129 aaKnown RBP7.03□□□□□ -1.28
HMGCL-206ENST00000496907 AMNQ9BXJ7 453 aa7.03□□□□□ -1.28
HMGCL-206ENST00000496907 RANBP17Q9H2T7 1088 aaKnown RBP7.03□□□□□ -1.28
HMGCL-206ENST00000496907 SEMA6BQ9H3T3 888 aa7.03□□□□□ -1.28
HMGCL-206ENST00000496907 C11orf49Q9H6J7 331 aa7.03□□□□□ -1.28
HMGCL-206ENST00000496907 NAP1L2Q9ULW6 460 aaPredicted RBP7.03□□□□□ -1.28
HMGCL-206ENST00000496907 DIS3Q9Y2L1 958 aaKnown RBP7.03□□□□□ -1.28
HMGCL-206ENST00000496907 TAF6LQ9Y6J9 622 aa7.03□□□□□ -1.28
HMGCL-206ENST00000496907 PFASO15067 1338 aa7.02□□□□□ -1.28
HMGCL-206ENST00000496907 ABCB11O95342 1321 aa7.02□□□□□ -1.28
HMGCL-206ENST00000496907 DOCK1Q14185 1865 aa7.02□□□□□ -1.28
HMGCL-206ENST00000496907 CFAP54Q96N23 3096 aa7.02□□□□□ -1.29
HMGCL-206ENST00000496907 PRPF3O43395 683 aaKnown RBP7.02□□□□□ -1.29
HMGCL-206ENST00000496907 PFKFB2O60825 505 aa7.02□□□□□ -1.29
HMGCL-206ENST00000496907 IFNAR1P17181 557 aa7.02□□□□□ -1.29
HMGCL-206ENST00000496907 PTPREP23469 700 aa7.02□□□□□ -1.29
HMGCL-206ENST00000496907 MDM2Q00987 491 aaPredicted RBP7.02□□□□□ -1.29
HMGCL-206ENST00000496907 SSRP1Q08945 709 aaKnown RBP7.02□□□□□ -1.29
HMGCL-206ENST00000496907 IRF5Q13568 498 aa7.02□□□□□ -1.29
HMGCL-206ENST00000496907 TOB2Q14106 344 aaPredicted RBP7.02□□□□□ -1.29
HMGCL-206ENST00000496907 PLS1Q14651 629 aa7.02□□□□□ -1.29
HMGCL-206ENST00000496907 TMEM132BQ14DG7 1078 aa7.02□□□□□ -1.29
HMGCL-206ENST00000496907 KIAA1755Q5JYT7 1200 aa7.02□□□□□ -1.29
HMGCL-206ENST00000496907 PLEKHH3Q7Z736 793 aa7.02□□□□□ -1.29
HMGCL-206ENST00000496907 MICU3Q86XE3 530 aa7.02□□□□□ -1.29
HMGCL-206ENST00000496907 NCAPG2Q86XI2 1143 aa7.02□□□□□ -1.29
HMGCL-206ENST00000496907 ADGRF4Q8IZF3 695 aa7.02□□□□□ -1.29
HMGCL-206ENST00000496907 CPXCR1Q8N123 301 aa7.02□□□□□ -1.29
HMGCL-206ENST00000496907 ATG4CQ96DT6 458 aa7.02□□□□□ -1.29
HMGCL-206ENST00000496907 MTMR8Q96EF0 704 aa7.02□□□□□ -1.29
HMGCL-206ENST00000496907 DDX11Q96FC9 970 aa7.02□□□□□ -1.29
HMGCL-206ENST00000496907 NUP88Q99567 741 aaPredicted RBP7.02□□□□□ -1.29
HMGCL-206ENST00000496907 PAGR1Q9BTK6 254 aa7.02□□□□□ -1.29
HMGCL-206ENST00000496907 MOV10L1Q9BXT6 1211 aaKnown RBP7.02□□□□□ -1.29
HMGCL-206ENST00000496907 RNF26Q9BY78 433 aaPredicted RBP7.02□□□□□ -1.29
HMGCL-206ENST00000496907 UPF3BQ9BZI7 483 aaKnown RBP7.02□□□□□ -1.29
HMGCL-206ENST00000496907 ACAD9Q9H845 621 aa7.02□□□□□ -1.29
HMGCL-206ENST00000496907 JMJD4Q9H9V9 463 aa7.02□□□□□ -1.29
HMGCL-206ENST00000496907 ADD3Q9UEY8 706 aaKnown RBP7.02□□□□□ -1.29
HMGCL-206ENST00000496907 CCPG1Q9ULG6 757 aa7.02□□□□□ -1.29
HMGCL-206ENST00000496907 MTMR7Q9Y216 660 aa7.02□□□□□ -1.29
HMGCL-206ENST00000496907 CDK5RAP2Q96SN8 1893 aa7.02□□□□□ -1.29
HMGCL-206ENST00000496907 FRMPD2Q68DX3 1309 aaPredicted RBP7.01□□□□□ -1.29
HMGCL-206ENST00000496907 BAZ2AQ9UIF9 1905 aaKnown RBP7.01□□□□□ -1.29
HMGCL-206ENST00000496907 NID2Q14112 1375 aa7.01□□□□□ -1.29
HMGCL-206ENST00000496907 GOLGA8HP0CJ92 632 aa7.01□□□□□ -1.29
HMGCL-206ENST00000496907 ERCC3P19447 782 aa7.01□□□□□ -1.29
HMGCL-206ENST00000496907 GNA11P29992 359 aa7.01□□□□□ -1.29
HMGCL-206ENST00000496907 RGS2P41220 211 aa7.01□□□□□ -1.29
HMGCL-206ENST00000496907 AK2P54819 239 aa7.01□□□□□ -1.29
HMGCL-206ENST00000496907 PTPN5P54829 565 aa7.01□□□□□ -1.29
HMGCL-206ENST00000496907 HMGN5P82970 282 aaKnown RBP7.01□□□□□ -1.29
HMGCL-206ENST00000496907 APOBRQ0VD83 1088 aa7.01□□□□□ -1.29
HMGCL-206ENST00000496907 Q3C1V9 767 aa7.01□□□□□ -1.29
HMGCL-206ENST00000496907 TMEM31Q5JXX7 168 aa7.01□□□□□ -1.29
HMGCL-206ENST00000496907 SNRNP48Q6IEG0 339 aaKnown RBP7.01□□□□□ -1.29
HMGCL-206ENST00000496907 TTBK2Q6IQ55 1244 aa7.01□□□□□ -1.29
HMGCL-206ENST00000496907 GALNT17Q6IS24 598 aa7.01□□□□□ -1.29
HMGCL-206ENST00000496907 PPP1R18Q6NYC8 613 aa7.01□□□□□ -1.29
HMGCL-206ENST00000496907 TMTC3Q6ZXV5 915 aa7.01□□□□□ -1.29
HMGCL-206ENST00000496907 DPP9Q86TI2 863 aa7.01□□□□□ -1.29
HMGCL-206ENST00000496907 ANKRD35Q8N283 1001 aa7.01□□□□□ -1.29
HMGCL-206ENST00000496907 STAG2Q8N3U4 1231 aa7.01□□□□□ -1.29
HMGCL-206ENST00000496907 REPS2Q8NFH8 660 aa7.01□□□□□ -1.29
HMGCL-206ENST00000496907 BICD2Q8TD16 824 aa7.01□□□□□ -1.29
HMGCL-206ENST00000496907 CUL5Q93034 780 aa7.01□□□□□ -1.29
HMGCL-206ENST00000496907 TRERF1Q96PN7 1200 aa7.01□□□□□ -1.29
HMGCL-206ENST00000496907 ASB2Q96Q27 587 aa7.01□□□□□ -1.29
HMGCL-206ENST00000496907 LRRC2Q9BYS8 371 aa7.01□□□□□ -1.29
HMGCL-206ENST00000496907 UBA5Q9GZZ9 404 aa7.01□□□□□ -1.29
HMGCL-206ENST00000496907 TTYH1Q9H313 450 aaPredicted RBP7.01□□□□□ -1.29
HMGCL-206ENST00000496907 RAVER2Q9HCJ3 691 aaKnown RBP7.01□□□□□ -1.29
HMGCL-206ENST00000496907 VAT1LQ9HCJ6 419 aa7.01□□□□□ -1.29
HMGCL-206ENST00000496907 HMX1Q9NP08 348 aaPredicted RBP7.01□□□□□ -1.29
HMGCL-206ENST00000496907 SH3GLB2Q9NR46 395 aa7.01□□□□□ -1.29
HMGCL-206ENST00000496907 FBXO28Q9NVF7 368 aa7.01□□□□□ -1.29
HMGCL-206ENST00000496907 BTBD7Q9P203 1132 aa7.01□□□□□ -1.29
HMGCL-206ENST00000496907 ZNF214Q9UL59 606 aaPredicted RBP7.01□□□□□ -1.29
HMGCL-206ENST00000496907 BRPF3Q9ULD4 1205 aa7.01□□□□□ -1.29
HMGCL-206ENST00000496907 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.01□□□□□ -1.29
HMGCL-206ENST00000496907 PCDHA1Q9Y5I3 950 aa7.01□□□□□ -1.29
HMGCL-206ENST00000496907 SIPA1L1O43166 1804 aa7.01□□□□□ -1.29
HMGCL-206ENST00000496907 TCF20Q9UGU0 1960 aaKnown RBP7□□□□□ -1.29
HMGCL-206ENST00000496907 EPG5Q9HCE0 2579 aa7□□□□□ -1.29
HMGCL-206ENST00000496907 ASB14A6NK59 587 aa7□□□□□ -1.29
HMGCL-206ENST00000496907 CNMDO75829 334 aa7□□□□□ -1.29
HMGCL-206ENST00000496907 DEXIO95424 95 aa7□□□□□ -1.29
HMGCL-206ENST00000496907 FOSP01100 380 aaPredicted RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms