RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 PLEKHN1Q494U1 663 aaPredicted RBP7.47□□□□□ -1.21
SNX13-211ENST00000496855 TMC6Q7Z403 805 aa7.47□□□□□ -1.21
SNX13-211ENST00000496855 USP33Q8TEY7 942 aa7.47□□□□□ -1.21
SNX13-211ENST00000496855 SGPP1Q9BX95 441 aa7.47□□□□□ -1.21
SNX13-211ENST00000496855 GCM1Q9NP62 436 aa7.47□□□□□ -1.21
SNX13-211ENST00000496855 MARCH2Q9P0N8 246 aa7.47□□□□□ -1.21
SNX13-211ENST00000496855 TIMM13Q9Y5L4 95 aaPredicted RBP7.47□□□□□ -1.21
SNX13-211ENST00000496855 FAM221BA6H8Z2 402 aa7.46□□□□□ -1.22
SNX13-211ENST00000496855 F8W031 263 aaPredicted RBP7.46□□□□□ -1.22
SNX13-211ENST00000496855 ADCY3O60266 1144 aa7.46□□□□□ -1.22
SNX13-211ENST00000496855 FUCA1P04066 466 aa7.46□□□□□ -1.22
SNX13-211ENST00000496855 PABPC1P11940 636 aaKnown RBP7.46□□□□□ -1.22
SNX13-211ENST00000496855 RAP1GAPP47736 663 aa7.46□□□□□ -1.22
SNX13-211ENST00000496855 RPL11P62913 178 aaKnown RBP7.46□□□□□ -1.22
SNX13-211ENST00000496855 IFRD2Q12894 506 aaPredicted RBP7.46□□□□□ -1.22
SNX13-211ENST00000496855 ZC3H14Q6PJT7 736 aaKnown RBP7.46□□□□□ -1.22
SNX13-211ENST00000496855 NSMFQ6X4W1 530 aa7.46□□□□□ -1.22
SNX13-211ENST00000496855 ATG14Q6ZNE5 492 aa7.46□□□□□ -1.22
SNX13-211ENST00000496855 KRTAP19-1Q8IUB9 90 aa7.46□□□□□ -1.22
SNX13-211ENST00000496855 RCBTB1Q8NDN9 531 aa7.46□□□□□ -1.22
SNX13-211ENST00000496855 PLEKHO2Q8TD55 490 aa7.46□□□□□ -1.22
SNX13-211ENST00000496855 OSBP2Q969R2 916 aa7.46□□□□□ -1.22
SNX13-211ENST00000496855 SRPK1Q96SB4 655 aaKnown RBP7.46□□□□□ -1.22
SNX13-211ENST00000496855 CNTD2Q9H8S5 307 aa7.46□□□□□ -1.22
SNX13-211ENST00000496855 BTG4Q9NY30 223 aa7.46□□□□□ -1.22
SNX13-211ENST00000496855 NPFFR2Q9Y5X5 522 aa7.46□□□□□ -1.22
SNX13-211ENST00000496855 KRTAP9-6A0A140TA67 174 aa7.45□□□□□ -1.22
SNX13-211ENST00000496855 ZC3H12DA2A288 527 aaKnown RBP7.45□□□□□ -1.22
SNX13-211ENST00000496855 MYO1BO43795 1136 aa7.45□□□□□ -1.22
SNX13-211ENST00000496855 DIAPH1O60610 1272 aaKnown RBP7.45□□□□□ -1.22
SNX13-211ENST00000496855 YBX3P16989 372 aaKnown RBP eCLIP7.45□□□□□ -1.22
SNX13-211ENST00000496855 GTF2A2P52657 109 aa7.45□□□□□ -1.22
SNX13-211ENST00000496855 YOD1Q5VVQ6 348 aaPredicted RBP7.45□□□□□ -1.22
SNX13-211ENST00000496855 TEX2Q8IWB9 1127 aa7.45□□□□□ -1.22
SNX13-211ENST00000496855 NETO2Q8NC67 525 aa7.45□□□□□ -1.22
SNX13-211ENST00000496855 UBXN4Q92575 508 aa7.45□□□□□ -1.22
SNX13-211ENST00000496855 HCFC2Q9Y5Z7 792 aa7.45□□□□□ -1.22
SNX13-211ENST00000496855 TCAF2A6NFQ2 919 aa7.44□□□□□ -1.22
SNX13-211ENST00000496855 LCP1P13796 627 aa7.44□□□□□ -1.22
SNX13-211ENST00000496855 BCL6P41182 706 aa7.44□□□□□ -1.22
SNX13-211ENST00000496855 WWC2Q6AWC2 1192 aa7.44□□□□□ -1.22
SNX13-211ENST00000496855 ZBTB38Q8NAP3 1195 aaPredicted RBP7.44□□□□□ -1.22
SNX13-211ENST00000496855 OSBPL2Q9H1P3 480 aa7.44□□□□□ -1.22
SNX13-211ENST00000496855 CD320Q9NPF0 282 aa7.44□□□□□ -1.22
SNX13-211ENST00000496855 DBR1Q9UK59 544 aaKnown RBP7.44□□□□□ -1.22
SNX13-211ENST00000496855 C22orf46C9J442 243 aa7.43□□□□□ -1.22
SNX13-211ENST00000496855 NTRK1P04629 796 aa7.43□□□□□ -1.22
SNX13-211ENST00000496855 PRR5P85299 388 aa7.43□□□□□ -1.22
SNX13-211ENST00000496855 USP53Q70EK8 1073 aa7.43□□□□□ -1.22
SNX13-211ENST00000496855 Q8N1Y9 231 aa7.43□□□□□ -1.22
SNX13-211ENST00000496855 RXFP1Q9HBX9 757 aa7.43□□□□□ -1.22
SNX13-211ENST00000496855 SMG5Q9UPR3 1016 aaKnown RBP7.43□□□□□ -1.22
SNX13-211ENST00000496855 PCDHA2Q9Y5H9 948 aa7.43□□□□□ -1.22
SNX13-211ENST00000496855 KDM2BQ8NHM5 1336 aa7.43□□□□□ -1.22
SNX13-211ENST00000496855 DBX1A6NMT0 343 aa7.43□□□□□ -1.22
SNX13-211ENST00000496855 N4BP3O15049 544 aa7.43□□□□□ -1.22
SNX13-211ENST00000496855 FPR2P25090 351 aa7.43□□□□□ -1.22
SNX13-211ENST00000496855 CDR1P51861 262 aa7.43□□□□□ -1.22
SNX13-211ENST00000496855 EPHB3P54753 998 aa7.43□□□□□ -1.22
SNX13-211ENST00000496855 CEP68Q76N32 757 aa7.43□□□□□ -1.22
SNX13-211ENST00000496855 NLRP10Q86W26 655 aa7.43□□□□□ -1.22
SNX13-211ENST00000496855 LDHDQ86WU2 507 aa7.43□□□□□ -1.22
SNX13-211ENST00000496855 ANKLE2Q86XL3 938 aa7.43□□□□□ -1.22
SNX13-211ENST00000496855 MZB1Q8WU39 189 aa7.43□□□□□ -1.22
SNX13-211ENST00000496855 PEX11GQ96HA9 241 aa7.43□□□□□ -1.22
SNX13-211ENST00000496855 DNAJC7Q99615 494 aa7.43□□□□□ -1.22
SNX13-211ENST00000496855 GPR27Q9NS67 375 aa7.43□□□□□ -1.22
SNX13-211ENST00000496855 FBXL7Q9UJT9 491 aa7.43□□□□□ -1.22
SNX13-211ENST00000496855 NUDT5Q9UKK9 219 aa7.43□□□□□ -1.22
SNX13-211ENST00000496855 ZNF200P98182 395 aaPredicted RBP7.42□□□□□ -1.22
SNX13-211ENST00000496855 LSAMPQ13449 338 aa7.42□□□□□ -1.22
SNX13-211ENST00000496855 NTRK3Q16288 839 aa7.42□□□□□ -1.22
SNX13-211ENST00000496855 KCNA10Q16322 511 aa7.42□□□□□ -1.22
SNX13-211ENST00000496855 RSPO2Q6UXX9 243 aaPredicted RBP7.42□□□□□ -1.22
SNX13-211ENST00000496855 CILP2Q8IUL8 1156 aa7.42□□□□□ -1.22
SNX13-211ENST00000496855 SCUBE1Q8IWY4 988 aa7.42□□□□□ -1.22
SNX13-211ENST00000496855 DCAF4Q8WV16 495 aa7.42□□□□□ -1.22
SNX13-211ENST00000496855 TRMT2BQ96GJ1 504 aaKnown RBP7.42□□□□□ -1.22
SNX13-211ENST00000496855 TMEM169Q96HH4 297 aa7.42□□□□□ -1.22
SNX13-211ENST00000496855 CDC6Q99741 560 aa7.42□□□□□ -1.22
SNX13-211ENST00000496855 PHF20Q9BVI0 1012 aa7.42□□□□□ -1.22
SNX13-211ENST00000496855 X6R8D5 127 aa7.42□□□□□ -1.22
SNX13-211ENST00000496855 NPIPB6E9PJ23 425 aa7.41□□□□□ -1.22
SNX13-211ENST00000496855 FAM153BP0C7A2 387 aa7.41□□□□□ -1.22
SNX13-211ENST00000496855 LONRF2Q1L5Z9 754 aa7.41□□□□□ -1.22
SNX13-211ENST00000496855 MROH9Q5TGP6 573 aa7.41□□□□□ -1.22
SNX13-211ENST00000496855 FOXB2Q5VYV0 432 aa7.41□□□□□ -1.22
SNX13-211ENST00000496855 RIOX2Q8IUF8 465 aa7.41□□□□□ -1.22
SNX13-211ENST00000496855 TSPAN17Q96FV3 270 aa7.41□□□□□ -1.22
SNX13-211ENST00000496855 CHAMP1Q96JM3 812 aa7.41□□□□□ -1.22
SNX13-211ENST00000496855 PCDHA5Q9Y5H7 936 aa7.41□□□□□ -1.22
SNX13-211ENST00000496855 IRS2Q9Y4H2 1338 aa7.4□□□□□ -1.22
SNX13-211ENST00000496855 TRBV23-1A0A0A0MS06 115 aa7.4□□□□□ -1.22
SNX13-211ENST00000496855 BLACEA4D250 179 aa7.4□□□□□ -1.22
SNX13-211ENST00000496855 H7BY64 318 aa7.4□□□□□ -1.22
SNX13-211ENST00000496855 MSCO60682 206 aa7.4□□□□□ -1.22
SNX13-211ENST00000496855 SLC9A5Q14940 896 aa7.4□□□□□ -1.22
SNX13-211ENST00000496855 NFE2L2Q16236 605 aa7.4□□□□□ -1.22
SNX13-211ENST00000496855 DCP2Q8IU60 420 aaKnown RBP7.4□□□□□ -1.22
SNX13-211ENST00000496855 IGDCC3Q8IVU1 814 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms