RNA–Protein interactions for RNA: ENST00000496466.1

UBXN11-216, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-216ENST00000496466 RXRBP28702 533 aa16.69■□□□□ 0.26
UBXN11-216ENST00000496466 DACT2Q5SW24 774 aa16.69■□□□□ 0.26
UBXN11-216ENST00000496466 DNAJC18Q9H819 358 aa16.69■□□□□ 0.26
UBXN11-216ENST00000496466 RASSF10A6NK89 507 aa16.68■□□□□ 0.26
UBXN11-216ENST00000496466 EDIL3O43854 480 aa16.68■□□□□ 0.26
UBXN11-216ENST00000496466 PPP1R2P41236 205 aa16.68■□□□□ 0.26
UBXN11-216ENST00000496466 RBM5P52756 815 aaKnown RBP eCLIP16.68■□□□□ 0.26
UBXN11-216ENST00000496466 GRB10Q13322 594 aa16.68■□□□□ 0.26
UBXN11-216ENST00000496466 CALCRLQ16602 461 aa16.68■□□□□ 0.26
UBXN11-216ENST00000496466 COBLL1Q53SF7 1204 aa16.68■□□□□ 0.26
UBXN11-216ENST00000496466 STRIP1Q5VSL9 837 aa16.68■□□□□ 0.26
UBXN11-216ENST00000496466 TTBK2Q6IQ55 1244 aa16.68■□□□□ 0.26
UBXN11-216ENST00000496466 EEF2KMTQ96G04 330 aa16.68■□□□□ 0.26
UBXN11-216ENST00000496466 CNOT6LQ96LI5 555 aaKnown RBP16.68■□□□□ 0.26
UBXN11-216ENST00000496466 TTYH3Q9C0H2 523 aa16.68■□□□□ 0.26
UBXN11-216ENST00000496466 ARFGAP3Q9NP61 516 aa16.68■□□□□ 0.26
UBXN11-216ENST00000496466 SLX4Q8IY92 1834 aa16.68■□□□□ 0.26
UBXN11-216ENST00000496466 ADCY7P51828 1080 aa16.68■□□□□ 0.26
UBXN11-216ENST00000496466 ZNF543Q08ER8 600 aa16.68■□□□□ 0.26
UBXN11-216ENST00000496466 SHROOM1Q2M3G4 852 aaPredicted RBP16.68■□□□□ 0.26
UBXN11-216ENST00000496466 TSR1Q2NL82 804 aaKnown RBP16.68■□□□□ 0.26
UBXN11-216ENST00000496466 CNNM4Q6P4Q7 775 aa16.68■□□□□ 0.26
UBXN11-216ENST00000496466 FAM114A1Q8IWE2 563 aa16.68■□□□□ 0.26
UBXN11-216ENST00000496466 KIAA0895Q8NCT3 520 aa16.68■□□□□ 0.26
UBXN11-216ENST00000496466 ANKZF1Q9H8Y5 726 aa16.68■□□□□ 0.26
UBXN11-216ENST00000496466 BLOC1S4Q9NUP1 217 aa16.68■□□□□ 0.26
UBXN11-216ENST00000496466 LRWD1Q9UFC0 647 aa16.68■□□□□ 0.26
UBXN11-216ENST00000496466 MYO3BQ8WXR4 1341 aa16.68■□□□□ 0.26
UBXN11-216ENST00000496466 DDTLA6NHG4 134 aaPredicted RBP16.67■□□□□ 0.26
UBXN11-216ENST00000496466 TFRCP02786 760 aaKnown RBP16.67■□□□□ 0.26
UBXN11-216ENST00000496466 FXR2P51116 673 aaKnown RBP eCLIP16.67■□□□□ 0.26
UBXN11-216ENST00000496466 TBC1D8BQ0IIM8 1120 aa16.67■□□□□ 0.26
UBXN11-216ENST00000496466 MEA1Q16626 185 aa16.67■□□□□ 0.26
UBXN11-216ENST00000496466 SV2BQ7L1I2 683 aa16.67■□□□□ 0.26
UBXN11-216ENST00000496466 ADGRF4Q8IZF3 695 aa16.67■□□□□ 0.26
UBXN11-216ENST00000496466 HPS3Q969F9 1004 aa16.67■□□□□ 0.26
UBXN11-216ENST00000496466 PNMA5Q96PV4 448 aa16.67■□□□□ 0.26
UBXN11-216ENST00000496466 NUP58Q9BVL2 599 aa16.67■□□□□ 0.26
UBXN11-216ENST00000496466 UBXN6Q9BZV1 441 aa16.67■□□□□ 0.26
UBXN11-216ENST00000496466 JMJD4Q9H9V9 463 aa16.67■□□□□ 0.26
UBXN11-216ENST00000496466 TRIM10Q9UDY6 481 aa16.67■□□□□ 0.26
UBXN11-216ENST00000496466 SCN9AQ15858 1988 aa16.67■□□□□ 0.26
UBXN11-216ENST00000496466 SLC37A4O43826 429 aa16.67■□□□□ 0.26
UBXN11-216ENST00000496466 SLC16A2P36021 539 aa16.67■□□□□ 0.26
UBXN11-216ENST00000496466 MTIF2P46199 727 aaKnown RBP16.67■□□□□ 0.26
UBXN11-216ENST00000496466 KLK7P49862 253 aa16.67■□□□□ 0.26
UBXN11-216ENST00000496466 HERVK_113P62684 666 aa16.67■□□□□ 0.26
UBXN11-216ENST00000496466 BRD3Q15059 726 aa16.67■□□□□ 0.26
UBXN11-216ENST00000496466 AOC3Q16853 763 aa16.67■□□□□ 0.26
UBXN11-216ENST00000496466 WHAMMP3Q1A5X7 153 aa16.67■□□□□ 0.26
UBXN11-216ENST00000496466 MIIPQ5JXC2 388 aa16.67■□□□□ 0.26
UBXN11-216ENST00000496466 EHD4Q9H223 541 aa16.67■□□□□ 0.26
UBXN11-216ENST00000496466 SEMA6BQ9H3T3 888 aa16.67■□□□□ 0.26
UBXN11-216ENST00000496466 AGPAT5Q9NUQ2 364 aa16.67■□□□□ 0.26
UBXN11-216ENST00000496466 FAM198AQ9UFP1 575 aa16.67■□□□□ 0.26
UBXN11-216ENST00000496466 GUCA1BQ9UMX6 200 aa16.67■□□□□ 0.26
UBXN11-216ENST00000496466 CCDC151A5D8V7 595 aa16.66■□□□□ 0.26
UBXN11-216ENST00000496466 PPP1R11O60927 126 aaPredicted RBP16.66■□□□□ 0.26
UBXN11-216ENST00000496466 TDP2O95551 362 aa16.66■□□□□ 0.26
UBXN11-216ENST00000496466 AMPD2Q01433 879 aa16.66■□□□□ 0.26
UBXN11-216ENST00000496466 MCM6Q14566 821 aa16.66■□□□□ 0.26
UBXN11-216ENST00000496466 KCTD1Q719H9 257 aa16.66■□□□□ 0.26
UBXN11-216ENST00000496466 RETREG2Q8NC44 543 aa16.66■□□□□ 0.26
UBXN11-216ENST00000496466 HAUS4Q9H6D7 363 aa16.66■□□□□ 0.26
UBXN11-216ENST00000496466 MYMKA6NI61 221 aa16.65■□□□□ 0.26
UBXN11-216ENST00000496466 TUBB4BP68371 445 aa16.65■□□□□ 0.26
UBXN11-216ENST00000496466 CCDC96Q2M329 555 aa16.65■□□□□ 0.26
UBXN11-216ENST00000496466 SH3BP5LQ7L8J4 393 aa16.65■□□□□ 0.26
UBXN11-216ENST00000496466 ZSCAN29Q8IWY8 852 aaPredicted RBP16.65■□□□□ 0.26
UBXN11-216ENST00000496466 MSANTD4Q8NCY6 345 aa16.65■□□□□ 0.26
UBXN11-216ENST00000496466 NOC4LQ9BVI4 516 aaKnown RBP16.65■□□□□ 0.26
UBXN11-216ENST00000496466 FUT8Q9BYC5 575 aa16.65■□□□□ 0.26
UBXN11-216ENST00000496466 SLC39A2Q9NP94 309 aa16.65■□□□□ 0.26
UBXN11-216ENST00000496466 STK17AQ9UEE5 414 aa16.65■□□□□ 0.26
UBXN11-216ENST00000496466 POTEB2H3BUK9 544 aa16.65■□□□□ 0.26
UBXN11-216ENST00000496466 TRIM21P19474 475 aaKnown RBP16.65■□□□□ 0.26
UBXN11-216ENST00000496466 FAM193AP78312 1265 aa16.65■□□□□ 0.26
UBXN11-216ENST00000496466 ZBED6P86452 979 aa16.65■□□□□ 0.26
UBXN11-216ENST00000496466 LONRF2Q1L5Z9 754 aa16.65■□□□□ 0.26
UBXN11-216ENST00000496466 TMEM266Q2M3C6 531 aa16.65■□□□□ 0.26
UBXN11-216ENST00000496466 CENPPQ6IPU0 288 aa16.65■□□□□ 0.26
UBXN11-216ENST00000496466 C7orf43Q8WVR3 580 aa16.65■□□□□ 0.26
UBXN11-216ENST00000496466 MRIQ9BWK5 157 aa16.65■□□□□ 0.26
UBXN11-216ENST00000496466 RAB21Q9UL25 225 aa16.65■□□□□ 0.26
UBXN11-216ENST00000496466 MYO6Q9UM54 1294 aa16.65■□□□□ 0.26
UBXN11-216ENST00000496466 PNMA6FA0A0J9YX94 578 aa16.64■□□□□ 0.25
UBXN11-216ENST00000496466 USP17L10C9JJH3 530 aa16.64■□□□□ 0.25
UBXN11-216ENST00000496466 NKRFO15226 690 aaKnown RBP eCLIP16.64■□□□□ 0.25
UBXN11-216ENST00000496466 EZH2Q15910 746 aaKnown RBP16.64■□□□□ 0.25
UBXN11-216ENST00000496466 UNC13DQ70J99 1090 aa16.64■□□□□ 0.25
UBXN11-216ENST00000496466 LARP4BQ92615 738 aaKnown RBP16.64■□□□□ 0.25
UBXN11-216ENST00000496466 ERGIC2Q96RQ1 377 aa16.64■□□□□ 0.25
UBXN11-216ENST00000496466 TNS1Q9HBL0 1735 aaKnown RBP16.64■□□□□ 0.25
UBXN11-216ENST00000496466 PVALEFA0A1B0GWK0 134 aa16.64■□□□□ 0.25
UBXN11-216ENST00000496466 CTAGE15A4D2H0 777 aa16.64■□□□□ 0.25
UBXN11-216ENST00000496466 PSMD14O00487 310 aa16.64■□□□□ 0.25
UBXN11-216ENST00000496466 RAD21O60216 631 aa16.64■□□□□ 0.25
UBXN11-216ENST00000496466 CTAGE8P0CG41 777 aa16.64■□□□□ 0.25
UBXN11-216ENST00000496466 FKBP1AP62942 108 aaKnown RBP16.64■□□□□ 0.25
UBXN11-216ENST00000496466 KRT83P78385 493 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms