RNA–Protein interactions for RNA: ENST00000496309.3

RN7SL564P-201, Transcript of RNA, 7SL, cytoplasmic 564, pseudogene, humanhuman

BASIC

Gene RN7SL564P, Length 250 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL564P-201ENST00000496309 CPLX1O14810 134 aa16.03■□□□□ 0.16
RN7SL564P-201ENST00000496309 PRPF3O43395 683 aaKnown RBP16.03■□□□□ 0.16
RN7SL564P-201ENST00000496309 PFKFB2O60825 505 aa16.03■□□□□ 0.16
RN7SL564P-201ENST00000496309 LARGE1O95461 756 aa16.03■□□□□ 0.16
RN7SL564P-201ENST00000496309 RARBP10826 455 aa16.03■□□□□ 0.16
RN7SL564P-201ENST00000496309 SCG2P13521 617 aa16.03■□□□□ 0.16
RN7SL564P-201ENST00000496309 ADCYAP1R1P41586 468 aa16.03■□□□□ 0.16
RN7SL564P-201ENST00000496309 MNX1P50219 401 aaPredicted RBP16.03■□□□□ 0.16
RN7SL564P-201ENST00000496309 NAPAP54920 295 aa16.03■□□□□ 0.16
RN7SL564P-201ENST00000496309 PKN1Q16512 942 aa16.03■□□□□ 0.16
RN7SL564P-201ENST00000496309 TAPT1Q6NXT6 567 aa16.03■□□□□ 0.16
RN7SL564P-201ENST00000496309 UBE2Q1Q7Z7E8 422 aa16.03■□□□□ 0.16
RN7SL564P-201ENST00000496309 ANKLE1Q8NAG6 615 aa16.03■□□□□ 0.16
RN7SL564P-201ENST00000496309 RNF26Q9BY78 433 aaPredicted RBP16.03■□□□□ 0.16
RN7SL564P-201ENST00000496309 SLKQ9H2G2 1235 aaPredicted RBP16.03■□□□□ 0.16
RN7SL564P-201ENST00000496309 PSTPIP2Q9H939 334 aa16.03■□□□□ 0.16
RN7SL564P-201ENST00000496309 VTA1Q9NP79 307 aa16.03■□□□□ 0.16
RN7SL564P-201ENST00000496309 XPNPEP3Q9NQH7 507 aa16.03■□□□□ 0.16
RN7SL564P-201ENST00000496309 BARHL2Q9NY43 387 aa16.03■□□□□ 0.16
RN7SL564P-201ENST00000496309 hCG_1984214I3L0E3 225 aa16.02■□□□□ 0.16
RN7SL564P-201ENST00000496309 PIK3CDO00329 1044 aa16.02■□□□□ 0.16
RN7SL564P-201ENST00000496309 MEIS2O14770 477 aa16.02■□□□□ 0.16
RN7SL564P-201ENST00000496309 PGK1P00558 417 aa16.02■□□□□ 0.16
RN7SL564P-201ENST00000496309 MYCNP04198 464 aaPredicted RBP16.02■□□□□ 0.16
RN7SL564P-201ENST00000496309 PTGS1P23219 599 aa16.02■□□□□ 0.16
RN7SL564P-201ENST00000496309 AKAP17AQ02040 695 aaKnown RBP16.02■□□□□ 0.16
RN7SL564P-201ENST00000496309 MLLT1Q03111 559 aaPredicted RBP16.02■□□□□ 0.16
RN7SL564P-201ENST00000496309 UBE2SQ16763 222 aa16.02■□□□□ 0.16
RN7SL564P-201ENST00000496309 ME3Q16798 604 aa16.02■□□□□ 0.16
RN7SL564P-201ENST00000496309 TMEM63BQ5T3F8 832 aa16.02■□□□□ 0.16
RN7SL564P-201ENST00000496309 PPP1R18Q6NYC8 613 aa16.02■□□□□ 0.16
RN7SL564P-201ENST00000496309 ZNF713Q8N859 430 aaPredicted RBP16.02■□□□□ 0.16
RN7SL564P-201ENST00000496309 IL31RAQ8NI17 732 aa16.02■□□□□ 0.16
RN7SL564P-201ENST00000496309 SMARCC2Q8TAQ2 1214 aa16.02■□□□□ 0.16
RN7SL564P-201ENST00000496309 CUL5Q93034 780 aa16.02■□□□□ 0.16
RN7SL564P-201ENST00000496309 PDCD2LQ9BRP1 358 aa16.02■□□□□ 0.16
RN7SL564P-201ENST00000496309 BACH2Q9BYV9 841 aa16.02■□□□□ 0.16
RN7SL564P-201ENST00000496309 RBM27Q9P2N5 1060 aaKnown RBP16.02■□□□□ 0.16
RN7SL564P-201ENST00000496309 KIAA0100Q14667 2235 aaKnown RBP16.02■□□□□ 0.15
RN7SL564P-201ENST00000496309 SYNRGQ9UMZ2 1314 aa16.01■□□□□ 0.15
RN7SL564P-201ENST00000496309 B4DLN1 442 aa16.01■□□□□ 0.15
RN7SL564P-201ENST00000496309 DTNBO60941 627 aa16.01■□□□□ 0.15
RN7SL564P-201ENST00000496309 CAPN2P17655 700 aa16.01■□□□□ 0.15
RN7SL564P-201ENST00000496309 MRPL12P52815 198 aaKnown RBP16.01■□□□□ 0.15
RN7SL564P-201ENST00000496309 TNFAIP2Q03169 654 aa16.01■□□□□ 0.15
RN7SL564P-201ENST00000496309 PGM5Q15124 567 aa16.01■□□□□ 0.15
RN7SL564P-201ENST00000496309 GJC2Q5T442 439 aaPredicted RBP16.01■□□□□ 0.15
RN7SL564P-201ENST00000496309 NECAB1Q8N987 351 aa16.01■□□□□ 0.15
RN7SL564P-201ENST00000496309 PAWRQ96IZ0 340 aaKnown RBP16.01■□□□□ 0.15
RN7SL564P-201ENST00000496309 TBC1D32Q96NH3 1257 aa16.01■□□□□ 0.15
RN7SL564P-201ENST00000496309 IWS1Q96ST2 819 aa16.01■□□□□ 0.15
RN7SL564P-201ENST00000496309 TNRC18O15417 2968 aaPredicted RBP16.01■□□□□ 0.15
RN7SL564P-201ENST00000496309 FRMPD4Q14CM0 1322 aa16■□□□□ 0.15
RN7SL564P-201ENST00000496309 SMCO2A6NFE2 343 aa16■□□□□ 0.15
RN7SL564P-201ENST00000496309 ADAMTS4O75173 837 aa16■□□□□ 0.15
RN7SL564P-201ENST00000496309 DUSP11O75319 330 aaKnown RBP16■□□□□ 0.15
RN7SL564P-201ENST00000496309 NR3C2P08235 984 aa16■□□□□ 0.15
RN7SL564P-201ENST00000496309 MYCLP12524 364 aaPredicted RBP16■□□□□ 0.15
RN7SL564P-201ENST00000496309 SMPD1P17405 629 aa16■□□□□ 0.15
RN7SL564P-201ENST00000496309 ADCY7P51828 1080 aa16■□□□□ 0.15
RN7SL564P-201ENST00000496309 IRX5P78411 483 aaPredicted RBP16■□□□□ 0.15
RN7SL564P-201ENST00000496309 SSRP1Q08945 709 aaKnown RBP16■□□□□ 0.15
RN7SL564P-201ENST00000496309 STXBP2Q15833 593 aa16■□□□□ 0.15
RN7SL564P-201ENST00000496309 CPLX2Q6PUV4 134 aaKnown RBP16■□□□□ 0.15
RN7SL564P-201ENST00000496309 TRIM22Q8IYM9 498 aa16■□□□□ 0.15
RN7SL564P-201ENST00000496309 WDR11Q9BZH6 1224 aa16■□□□□ 0.15
RN7SL564P-201ENST00000496309 RBM47A0AV96 593 aaKnown RBP15.99■□□□□ 0.15
RN7SL564P-201ENST00000496309 MYADML2A6NDP7 307 aa15.99■□□□□ 0.15
RN7SL564P-201ENST00000496309 DNM1LO00429 736 aa15.99■□□□□ 0.15
RN7SL564P-201ENST00000496309 RABEP1Q15276 862 aa15.99■□□□□ 0.15
RN7SL564P-201ENST00000496309 LRRC41Q15345 812 aa15.99■□□□□ 0.15
RN7SL564P-201ENST00000496309 IQSEC1Q6DN90 963 aa15.99■□□□□ 0.15
RN7SL564P-201ENST00000496309 SEPT14Q6ZU15 432 aa15.99■□□□□ 0.15
RN7SL564P-201ENST00000496309 NECAB2Q7Z6G3 386 aa15.99■□□□□ 0.15
RN7SL564P-201ENST00000496309 ARRDC4Q8NCT1 418 aa15.99■□□□□ 0.15
RN7SL564P-201ENST00000496309 GTF3C6Q969F1 213 aa15.99■□□□□ 0.15
RN7SL564P-201ENST00000496309 ZFP91Q96JP5 570 aaPredicted RBP15.99■□□□□ 0.15
RN7SL564P-201ENST00000496309 C11orf49Q9H6J7 331 aa15.99■□□□□ 0.15
RN7SL564P-201ENST00000496309 RIC8AQ9NPQ8 531 aa15.99■□□□□ 0.15
RN7SL564P-201ENST00000496309 VPS54Q9P1Q0 977 aa15.99■□□□□ 0.15
RN7SL564P-201ENST00000496309 GNEQ9Y223 722 aaKnown RBP15.99■□□□□ 0.15
RN7SL564P-201ENST00000496309 KIAA1217Q5T5P2 1943 aa15.98■□□□□ 0.15
RN7SL564P-201ENST00000496309 SPDYE3A6NKU9 549 aa15.98■□□□□ 0.15
RN7SL564P-201ENST00000496309 KBTBD13C9JR72 458 aa15.98■□□□□ 0.15
RN7SL564P-201ENST00000496309 EIF3JO75822 258 aaKnown RBP15.98■□□□□ 0.15
RN7SL564P-201ENST00000496309 CDKL5O76039 1030 aa15.98■□□□□ 0.15
RN7SL564P-201ENST00000496309 DEXIO95424 95 aa15.98■□□□□ 0.15
RN7SL564P-201ENST00000496309 CTDNEP1O95476 244 aa15.98■□□□□ 0.15
RN7SL564P-201ENST00000496309 COL6A1P12109 1028 aa15.98■□□□□ 0.15
RN7SL564P-201ENST00000496309 CCND2P30279 289 aa15.98■□□□□ 0.15
RN7SL564P-201ENST00000496309 RNF180Q86T96 592 aa15.98■□□□□ 0.15
RN7SL564P-201ENST00000496309 TLK2Q86UE8 772 aa15.98■□□□□ 0.15
RN7SL564P-201ENST00000496309 VSIG10LQ86VR7 867 aa15.98■□□□□ 0.15
RN7SL564P-201ENST00000496309 SCFD2Q8WU76 684 aa15.98■□□□□ 0.15
RN7SL564P-201ENST00000496309 PGBD1Q96JS3 809 aa15.98■□□□□ 0.15
RN7SL564P-201ENST00000496309 TMEM260Q9NX78 707 aa15.98■□□□□ 0.15
RN7SL564P-201ENST00000496309 LIMCH1Q9UPQ0 1083 aa15.98■□□□□ 0.15
RN7SL564P-201ENST00000496309 ADAMTS3O15072 1205 aa15.97■□□□□ 0.15
RN7SL564P-201ENST00000496309 ARIH2O95376 493 aa15.97■□□□□ 0.15
RN7SL564P-201ENST00000496309 C6orf222P0C671 652 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms