RNA–Protein interactions for RNA: ENST00000496262.1

RNF220-217, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-217ENST00000496262 SCLYQ96I15 445 aa12.74□□□□□ -0.37
RNF220-217ENST00000496262 ZSCAN10Q96SZ4 725 aaPredicted RBP12.74□□□□□ -0.37
RNF220-217ENST00000496262 WNT8AQ9H1J5 351 aa12.74□□□□□ -0.37
RNF220-217ENST00000496262 ALDH8A1Q9H2A2 487 aaPredicted RBP12.74□□□□□ -0.37
RNF220-217ENST00000496262 POLR3EQ9NVU0 708 aa12.74□□□□□ -0.37
RNF220-217ENST00000496262 PNMA2Q9UL42 364 aa12.74□□□□□ -0.37
RNF220-217ENST00000496262 TNKSO95271 1327 aa12.73□□□□□ -0.37
RNF220-217ENST00000496262 RAD50Q92878 1312 aa12.73□□□□□ -0.37
RNF220-217ENST00000496262 ZBBXA8MT70 800 aa12.73□□□□□ -0.37
RNF220-217ENST00000496262 HIP1O00291 1037 aa12.73□□□□□ -0.37
RNF220-217ENST00000496262 TXNP10599 105 aaKnown RBP12.73□□□□□ -0.37
RNF220-217ENST00000496262 PURAQ00577 322 aaKnown RBP12.73□□□□□ -0.37
RNF220-217ENST00000496262 RASIP1Q5U651 963 aa12.73□□□□□ -0.37
RNF220-217ENST00000496262 ENAHQ8N8S7 591 aaPredicted RBP12.73□□□□□ -0.37
RNF220-217ENST00000496262 USP38Q8NB14 1042 aa12.73□□□□□ -0.37
RNF220-217ENST00000496262 SCFD2Q8WU76 684 aa12.73□□□□□ -0.37
RNF220-217ENST00000496262 MTG1Q9BT17 334 aaPredicted RBP12.73□□□□□ -0.37
RNF220-217ENST00000496262 MTIF3Q9H2K0 278 aaKnown RBP12.73□□□□□ -0.37
RNF220-217ENST00000496262 OSBPL3Q9H4L5 887 aa12.73□□□□□ -0.37
RNF220-217ENST00000496262 PRDM12Q9H4Q4 367 aa12.73□□□□□ -0.37
RNF220-217ENST00000496262 VAT1LQ9HCJ6 419 aa12.73□□□□□ -0.37
RNF220-217ENST00000496262 LOC102724159A0A0B4J2E5 919 aa12.72□□□□□ -0.37
RNF220-217ENST00000496262 RBM47A0AV96 593 aaKnown RBP12.72□□□□□ -0.37
RNF220-217ENST00000496262 PARP1P09874 1014 aaKnown RBP12.72□□□□□ -0.37
RNF220-217ENST00000496262 PWP2Q15269 919 aaKnown RBP12.72□□□□□ -0.37
RNF220-217ENST00000496262 BRDTQ58F21 947 aaPredicted RBP12.72□□□□□ -0.37
RNF220-217ENST00000496262 SEPT14Q6ZU15 432 aa12.72□□□□□ -0.37
RNF220-217ENST00000496262 DEFB128Q7Z7B8 93 aa12.72□□□□□ -0.37
RNF220-217ENST00000496262 ADGRF4Q8IZF3 695 aa12.72□□□□□ -0.37
RNF220-217ENST00000496262 DNERQ8NFT8 737 aa12.72□□□□□ -0.37
RNF220-217ENST00000496262 HERVK_113Q902F9 699 aa12.72□□□□□ -0.37
RNF220-217ENST00000496262 TBC1D5Q92609 795 aa12.72□□□□□ -0.37
RNF220-217ENST00000496262 UBAC1Q9BSL1 405 aa12.72□□□□□ -0.37
RNF220-217ENST00000496262 SEZ6LQ9BYH1 1024 aa12.72□□□□□ -0.37
RNF220-217ENST00000496262 IL25Q9H293 177 aa12.72□□□□□ -0.37
RNF220-217ENST00000496262 NKX2-4Q9H2Z4 354 aa12.72□□□□□ -0.37
RNF220-217ENST00000496262 MSRAQ9UJ68 235 aa12.72□□□□□ -0.37
RNF220-217ENST00000496262 CUL9Q8IWT3 2517 aa12.72□□□□□ -0.37
RNF220-217ENST00000496262 ABCB11O95342 1321 aa12.71□□□□□ -0.37
RNF220-217ENST00000496262 B4DLN1 442 aa12.71□□□□□ -0.37
RNF220-217ENST00000496262 ARIH2O95376 493 aa12.71□□□□□ -0.37
RNF220-217ENST00000496262 EDNRBP24530 442 aa12.71□□□□□ -0.37
RNF220-217ENST00000496262 MRPL12P52815 198 aaKnown RBP12.71□□□□□ -0.37
RNF220-217ENST00000496262 RABGGTBP53611 331 aa12.71□□□□□ -0.37
RNF220-217ENST00000496262 BECN1Q14457 450 aa12.71□□□□□ -0.37
RNF220-217ENST00000496262 TTLL4Q14679 1199 aa12.71□□□□□ -0.37
RNF220-217ENST00000496262 QRICH1Q2TAL8 776 aa12.71□□□□□ -0.37
RNF220-217ENST00000496262 NBPF20Q3BBV1 942 aa12.71□□□□□ -0.37
RNF220-217ENST00000496262 ASPRV1Q53RT3 343 aa12.71□□□□□ -0.37
RNF220-217ENST00000496262 CCDC178Q5BJE1 867 aa12.71□□□□□ -0.37
RNF220-217ENST00000496262 CHST3Q7LGC8 479 aa12.71□□□□□ -0.37
RNF220-217ENST00000496262 TAAR1Q96RJ0 339 aa12.71□□□□□ -0.37
RNF220-217ENST00000496262 GAS2L1Q99501 681 aaPredicted RBP12.71□□□□□ -0.37
RNF220-217ENST00000496262 DSCC1Q9BVC3 393 aa12.71□□□□□ -0.37
RNF220-217ENST00000496262 KRT23Q9C075 422 aa12.71□□□□□ -0.37
RNF220-217ENST00000496262 ZSWIM5Q9P217 1185 aa12.71□□□□□ -0.37
RNF220-217ENST00000496262 COL20A1Q9P218 1284 aa12.71□□□□□ -0.37
RNF220-217ENST00000496262 CTNNA3Q9UI47 895 aa12.71□□□□□ -0.37
RNF220-217ENST00000496262 YBX2Q9Y2T7 364 aaKnown RBP12.71□□□□□ -0.37
RNF220-217ENST00000496262 SLC4A7Q9Y6M7 1214 aa12.71□□□□□ -0.37
RNF220-217ENST00000496262 VCANP13611 3396 aa12.71□□□□□ -0.38
RNF220-217ENST00000496262 LAMA4Q16363 1823 aa12.71□□□□□ -0.38
RNF220-217ENST00000496262 CHD9Q3L8U1 2897 aa12.7□□□□□ -0.38
RNF220-217ENST00000496262 NKRFO15226 690 aaKnown RBP eCLIP12.7□□□□□ -0.38
RNF220-217ENST00000496262 SUPT20HL2P0C7V6 817 aa12.7□□□□□ -0.38
RNF220-217ENST00000496262 IGFBP4P22692 258 aa12.7□□□□□ -0.38
RNF220-217ENST00000496262 RAB30Q15771 203 aa12.7□□□□□ -0.38
RNF220-217ENST00000496262 LY6KQ17RY6 165 aa12.7□□□□□ -0.38
RNF220-217ENST00000496262 IFIT1BQ5T764 474 aaKnown RBP12.7□□□□□ -0.38
RNF220-217ENST00000496262 FBXO11Q86XK2 927 aa12.7□□□□□ -0.38
RNF220-217ENST00000496262 RPUSD2Q8IZ73 545 aaKnown RBP12.7□□□□□ -0.38
RNF220-217ENST00000496262 SYTL5Q8TDW5 730 aaPredicted RBP12.7□□□□□ -0.38
RNF220-217ENST00000496262 JMJD4Q9H9V9 463 aa12.7□□□□□ -0.38
RNF220-217ENST00000496262 NOD1Q9Y239 953 aa12.7□□□□□ -0.38
RNF220-217ENST00000496262 A6NJR5 290 aa12.69□□□□□ -0.38
RNF220-217ENST00000496262 CFBP00751 764 aa12.69□□□□□ -0.38
RNF220-217ENST00000496262 MYOGP15173 224 aa12.69□□□□□ -0.38
RNF220-217ENST00000496262 EIF2AK2P19525 551 aaKnown RBP12.69□□□□□ -0.38
RNF220-217ENST00000496262 CCDC85BQ15834 202 aaPredicted RBP12.69□□□□□ -0.38
RNF220-217ENST00000496262 ARHGEF16Q5VV41 709 aa12.69□□□□□ -0.38
RNF220-217ENST00000496262 MCF2L2Q86YR7 1114 aa12.69□□□□□ -0.38
RNF220-217ENST00000496262 STAG2Q8N3U4 1231 aa12.69□□□□□ -0.38
RNF220-217ENST00000496262 RGS22Q8NE09 1264 aa12.69□□□□□ -0.38
RNF220-217ENST00000496262 NSUN6Q8TEA1 469 aaKnown RBP12.69□□□□□ -0.38
RNF220-217ENST00000496262 AFG1LQ8WV93 481 aa12.69□□□□□ -0.38
RNF220-217ENST00000496262 ANKS1AQ92625 1134 aa12.69□□□□□ -0.38
RNF220-217ENST00000496262 RMDN3Q96TC7 470 aa12.69□□□□□ -0.38
RNF220-217ENST00000496262 CNNM2Q9H8M5 875 aa12.69□□□□□ -0.38
RNF220-217ENST00000496262 SLC28A3Q9HAS3 691 aa12.69□□□□□ -0.38
RNF220-217ENST00000496262 RTN4Q9NQC3 1192 aaKnown RBP12.69□□□□□ -0.38
RNF220-217ENST00000496262 PRDM6Q9NQX0 595 aa12.69□□□□□ -0.38
RNF220-217ENST00000496262 MRPL11Q9Y3B7 192 aaKnown RBP12.69□□□□□ -0.38
RNF220-217ENST00000496262 SORBS3O60504 671 aa12.68□□□□□ -0.38
RNF220-217ENST00000496262 KPNA6O60684 536 aa12.68□□□□□ -0.38
RNF220-217ENST00000496262 GSPT1P15170 499 aaKnown RBP12.68□□□□□ -0.38
RNF220-217ENST00000496262 STXBP2Q15833 593 aa12.68□□□□□ -0.38
RNF220-217ENST00000496262 TTC22Q5TAA0 569 aa12.68□□□□□ -0.38
RNF220-217ENST00000496262 PPP2R2DQ66LE6 453 aa12.68□□□□□ -0.38
RNF220-217ENST00000496262 NFRKBQ6P4R8 1299 aa12.68□□□□□ -0.38
RNF220-217ENST00000496262 CYB5R4Q7L1T6 521 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms