RNA–Protein interactions for RNA: ENST00000495680.2

SHROOM1-206, Transcript of shroom family member 1, humanhuman

TSL 3

Gene SHROOM1, Length 281 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-206ENST00000495680 THEGQ9P2T0 379 aa14.14□□□□□ -0.15
SHROOM1-206ENST00000495680 REV3LO60673 3130 aa14.13□□□□□ -0.15
SHROOM1-206ENST00000495680 PRRC2BQ5JSZ5 2229 aaKnown RBP14.13□□□□□ -0.15
SHROOM1-206ENST00000495680 A6NJR5 290 aa14.13□□□□□ -0.15
SHROOM1-206ENST00000495680 SUPT20HL2P0C7V6 817 aa14.13□□□□□ -0.15
SHROOM1-206ENST00000495680 TXNP10599 105 aaKnown RBP14.13□□□□□ -0.15
SHROOM1-206ENST00000495680 CHMP4BP1P59074 171 aa14.13□□□□□ -0.15
SHROOM1-206ENST00000495680 CDC37Q16543 378 aaPredicted RBP14.13□□□□□ -0.15
SHROOM1-206ENST00000495680 CCDC62Q6P9F0 684 aa14.13□□□□□ -0.15
SHROOM1-206ENST00000495680 DNERQ8NFT8 737 aa14.13□□□□□ -0.15
SHROOM1-206ENST00000495680 SYTL5Q8TDW5 730 aaPredicted RBP14.13□□□□□ -0.15
SHROOM1-206ENST00000495680 ASB2Q96Q27 587 aa14.13□□□□□ -0.15
SHROOM1-206ENST00000495680 TAAR1Q96RJ0 339 aa14.13□□□□□ -0.15
SHROOM1-206ENST00000495680 CTAGE1Q96RT6 745 aa14.13□□□□□ -0.15
SHROOM1-206ENST00000495680 CERS4Q9HA82 394 aa14.13□□□□□ -0.15
SHROOM1-206ENST00000495680 GPHNQ9NQX3 736 aaPredicted RBP14.13□□□□□ -0.15
SHROOM1-206ENST00000495680 PCDHA11Q9Y5I1 949 aa14.13□□□□□ -0.15
SHROOM1-206ENST00000495680 TRIP12Q14669 1992 aaPredicted RBP14.13□□□□□ -0.15
SHROOM1-206ENST00000495680 PTPRSQ13332 1948 aa14.12□□□□□ -0.15
SHROOM1-206ENST00000495680 EPOPA6NHQ4 379 aa14.12□□□□□ -0.15
SHROOM1-206ENST00000495680 B4E1Z4 1266 aa14.12□□□□□ -0.15
SHROOM1-206ENST00000495680 TNFRSF10AO00220 468 aa14.12□□□□□ -0.15
SHROOM1-206ENST00000495680 KDM4AO75164 1064 aa14.12□□□□□ -0.15
SHROOM1-206ENST00000495680 CA3P07451 260 aa14.12□□□□□ -0.15
SHROOM1-206ENST00000495680 IQCF3P0C7M6 154 aa14.12□□□□□ -0.15
SHROOM1-206ENST00000495680 PCP11498 1178 aaKnown RBP14.12□□□□□ -0.15
SHROOM1-206ENST00000495680 NFRKBQ6P4R8 1299 aa14.12□□□□□ -0.15
SHROOM1-206ENST00000495680 CWC27Q6UX04 472 aaKnown RBP14.12□□□□□ -0.15
SHROOM1-206ENST00000495680 SPRED2Q7Z698 418 aa14.12□□□□□ -0.15
SHROOM1-206ENST00000495680 PLEKHM2Q8IWE5 1019 aa14.12□□□□□ -0.15
SHROOM1-206ENST00000495680 SMC5Q8IY18 1101 aa14.12□□□□□ -0.15
SHROOM1-206ENST00000495680 ADGRF4Q8IZF3 695 aa14.12□□□□□ -0.15
SHROOM1-206ENST00000495680 MICALL1Q8N3F8 863 aa14.12□□□□□ -0.15
SHROOM1-206ENST00000495680 PNMA1Q8ND90 353 aa14.12□□□□□ -0.15
SHROOM1-206ENST00000495680 AFG1LQ8WV93 481 aa14.12□□□□□ -0.15
SHROOM1-206ENST00000495680 ATXN2LQ8WWM7 1075 aaKnown RBP14.12□□□□□ -0.15
SHROOM1-206ENST00000495680 ESR2Q92731 530 aa14.12□□□□□ -0.15
SHROOM1-206ENST00000495680 TCF20Q9UGU0 1960 aaKnown RBP14.11□□□□□ -0.15
SHROOM1-206ENST00000495680 NCOR1O75376 2440 aa14.11□□□□□ -0.15
SHROOM1-206ENST00000495680 ZNF213O14771 459 aa14.11□□□□□ -0.15
SHROOM1-206ENST00000495680 NKRFO15226 690 aaKnown RBP eCLIP14.11□□□□□ -0.15
SHROOM1-206ENST00000495680 IGHDP01880 384 aa14.11□□□□□ -0.15
SHROOM1-206ENST00000495680 PFKMP08237 780 aa14.11□□□□□ -0.15
SHROOM1-206ENST00000495680 MMP3P08254 477 aa14.11□□□□□ -0.15
SHROOM1-206ENST00000495680 ARHGAP1Q07960 439 aa14.11□□□□□ -0.15
SHROOM1-206ENST00000495680 GPNMBQ14956 572 aa14.11□□□□□ -0.15
SHROOM1-206ENST00000495680 LY6KQ17RY6 165 aa14.11□□□□□ -0.15
SHROOM1-206ENST00000495680 GPATCH4Q5T3I0 446 aaKnown RBP14.11□□□□□ -0.15
SHROOM1-206ENST00000495680 KRT40Q6A162 431 aa14.11□□□□□ -0.15
SHROOM1-206ENST00000495680 SEPT14Q6ZU15 432 aa14.11□□□□□ -0.15
SHROOM1-206ENST00000495680 DGKHQ86XP1 1220 aa14.11□□□□□ -0.15
SHROOM1-206ENST00000495680 ENAHQ8N8S7 591 aaPredicted RBP14.11□□□□□ -0.15
SHROOM1-206ENST00000495680 ADAMTS19Q8TE59 1207 aa14.11□□□□□ -0.15
SHROOM1-206ENST00000495680 KAT2BQ92831 832 aa14.11□□□□□ -0.15
SHROOM1-206ENST00000495680 NECAB3Q96P71 396 aaPredicted RBP14.11□□□□□ -0.15
SHROOM1-206ENST00000495680 IL25Q9H293 177 aa14.11□□□□□ -0.15
SHROOM1-206ENST00000495680 RNF41Q9H4P4 317 aaPredicted RBP14.11□□□□□ -0.15
SHROOM1-206ENST00000495680 PNMA2Q9UL42 364 aa14.11□□□□□ -0.15
SHROOM1-206ENST00000495680 MYH6P13533 1939 aa14.1□□□□□ -0.15
SHROOM1-206ENST00000495680 KIAA1217Q5T5P2 1943 aa14.1□□□□□ -0.15
SHROOM1-206ENST00000495680 TFF2Q03403 129 aa14.1□□□□□ -0.15
SHROOM1-206ENST00000495680 QRICH1Q2TAL8 776 aa14.1□□□□□ -0.15
SHROOM1-206ENST00000495680 BRDTQ58F21 947 aaPredicted RBP14.1□□□□□ -0.15
SHROOM1-206ENST00000495680 GDF6Q6KF10 455 aaPredicted RBP14.1□□□□□ -0.15
SHROOM1-206ENST00000495680 CHST3Q7LGC8 479 aa14.1□□□□□ -0.15
SHROOM1-206ENST00000495680 TMCO2Q7Z6W1 182 aaPredicted RBP14.1□□□□□ -0.15
SHROOM1-206ENST00000495680 TICAM2Q86XR7 235 aa14.1□□□□□ -0.15
SHROOM1-206ENST00000495680 RGS22Q8NE09 1264 aa14.1□□□□□ -0.15
SHROOM1-206ENST00000495680 DHX38Q92620 1227 aaKnown RBP14.1□□□□□ -0.15
SHROOM1-206ENST00000495680 ANKS1AQ92625 1134 aa14.1□□□□□ -0.15
SHROOM1-206ENST00000495680 VAT1LQ9HCJ6 419 aa14.1□□□□□ -0.15
SHROOM1-206ENST00000495680 ZSWIM5Q9P217 1185 aa14.1□□□□□ -0.15
SHROOM1-206ENST00000495680 RAD50Q92878 1312 aa14.1□□□□□ -0.15
SHROOM1-206ENST00000495680 PITPNM1O00562 1244 aa14.09□□□□□ -0.15
SHROOM1-206ENST00000495680 OPLAHO14841 1288 aa14.09□□□□□ -0.15
SHROOM1-206ENST00000495680 KPNA6O60684 536 aa14.09□□□□□ -0.15
SHROOM1-206ENST00000495680 MRPS5P82675 430 aaKnown RBP14.09□□□□□ -0.15
SHROOM1-206ENST00000495680 PTGISQ16647 500 aa14.09□□□□□ -0.15
SHROOM1-206ENST00000495680 TCTN1Q2MV58 587 aa14.09□□□□□ -0.15
SHROOM1-206ENST00000495680 TMEM67Q5HYA8 995 aa14.09□□□□□ -0.15
SHROOM1-206ENST00000495680 CHD1LQ86WJ1 897 aa14.09□□□□□ -0.15
SHROOM1-206ENST00000495680 ZSCAN10Q96SZ4 725 aaPredicted RBP14.09□□□□□ -0.15
SHROOM1-206ENST00000495680 MPHOSPH6Q99547 160 aaKnown RBP14.09□□□□□ -0.15
SHROOM1-206ENST00000495680 FTOQ9C0B1 505 aaKnown RBP eCLIP14.09□□□□□ -0.15
SHROOM1-206ENST00000495680 KAT14Q9H8E8 782 aa14.09□□□□□ -0.15
SHROOM1-206ENST00000495680 JMJD4Q9H9V9 463 aa14.09□□□□□ -0.15
SHROOM1-206ENST00000495680 RAPGEFL1Q9UHV5 662 aa14.09□□□□□ -0.15
SHROOM1-206ENST00000495680 ABCB11O95342 1321 aa14.09□□□□□ -0.15
SHROOM1-206ENST00000495680 XIRP2A4UGR9 3374 aa14.08□□□□□ -0.15
SHROOM1-206ENST00000495680 PPP1R11O60927 126 aaPredicted RBP14.08□□□□□ -0.16
SHROOM1-206ENST00000495680 GH1P01241 217 aa14.08□□□□□ -0.16
SHROOM1-206ENST00000495680 EIF2AK2P19525 551 aaKnown RBP14.08□□□□□ -0.16
SHROOM1-206ENST00000495680 RFC2P35250 354 aa14.08□□□□□ -0.16
SHROOM1-206ENST00000495680 NUCB1Q02818 461 aa14.08□□□□□ -0.16
SHROOM1-206ENST00000495680 TAP1Q03518 808 aa14.08□□□□□ -0.16
SHROOM1-206ENST00000495680 PTPN11Q06124 597 aaPredicted RBP14.08□□□□□ -0.16
SHROOM1-206ENST00000495680 IQCA1Q86XH1 822 aa14.08□□□□□ -0.16
SHROOM1-206ENST00000495680 HERC6Q8IVU3 1022 aa14.08□□□□□ -0.16
SHROOM1-206ENST00000495680 STAG2Q8N3U4 1231 aa14.08□□□□□ -0.16
SHROOM1-206ENST00000495680 RETREG2Q8NC44 543 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms