RNA–Protein interactions for RNA: ENST00000495044.5

CCDC30-211, Transcript of coiled-coil domain containing 30, humanhuman

TSL 2

Gene CCDC30, Length 2,021 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-211ENST00000495044 GPATCH3Q96I76 525 aa8.69□□□□□ -1.02
CCDC30-211ENST00000495044 PURBQ96QR8 312 aaKnown RBP8.69□□□□□ -1.02
CCDC30-211ENST00000495044 LRRCC1Q9C099 1032 aa8.69□□□□□ -1.02
CCDC30-211ENST00000495044 UBE2ZQ9H832 354 aaPredicted RBP8.69□□□□□ -1.02
CCDC30-211ENST00000495044 PRR12Q9ULL5 1215 aa8.69□□□□□ -1.02
CCDC30-211ENST00000495044 MTMR7Q9Y216 660 aa8.69□□□□□ -1.02
CCDC30-211ENST00000495044 LOC102724159A0A0B4J2E5 919 aa8.68□□□□□ -1.02
CCDC30-211ENST00000495044 RNF113AO15541 343 aaKnown RBP8.68□□□□□ -1.02
CCDC30-211ENST00000495044 ICAM1P05362 532 aa8.68□□□□□ -1.02
CCDC30-211ENST00000495044 ZFYP08048 801 aaPredicted RBP8.68□□□□□ -1.02
CCDC30-211ENST00000495044 ALADP13716 330 aa8.68□□□□□ -1.02
CCDC30-211ENST00000495044 KCNA5P22460 613 aa8.68□□□□□ -1.02
CCDC30-211ENST00000495044 BAATQ14032 418 aaPredicted RBP8.68□□□□□ -1.02
CCDC30-211ENST00000495044 PWP2Q15269 919 aaKnown RBP8.68□□□□□ -1.02
CCDC30-211ENST00000495044 PTGISQ16647 500 aa8.68□□□□□ -1.02
CCDC30-211ENST00000495044 RCSD1Q6JBY9 416 aa8.68□□□□□ -1.02
CCDC30-211ENST00000495044 SPRED2Q7Z698 418 aa8.68□□□□□ -1.02
CCDC30-211ENST00000495044 GJD3Q8N144 294 aa8.68□□□□□ -1.02
CCDC30-211ENST00000495044 KBTBD3Q8NAB2 608 aa8.68□□□□□ -1.02
CCDC30-211ENST00000495044 CAGE1Q8TC20 777 aa8.68□□□□□ -1.02
CCDC30-211ENST00000495044 AFAP1L1Q8TED9 768 aa8.68□□□□□ -1.02
CCDC30-211ENST00000495044 NAPBQ9H115 298 aa8.68□□□□□ -1.02
CCDC30-211ENST00000495044 ECHDC1Q9NTX5 307 aa8.68□□□□□ -1.02
CCDC30-211ENST00000495044 DDX19BQ9UMR2 479 aa8.68□□□□□ -1.02
CCDC30-211ENST00000495044 TRIP12Q14669 1992 aaPredicted RBP8.68□□□□□ -1.02
CCDC30-211ENST00000495044 LCHNA4D1U4 455 aa8.68□□□□□ -1.02
CCDC30-211ENST00000495044 TSPY2A6NKD2 308 aa8.68□□□□□ -1.02
CCDC30-211ENST00000495044 M0R2C6 588 aa8.68□□□□□ -1.02
CCDC30-211ENST00000495044 CALML3P27482 149 aa8.68□□□□□ -1.02
CCDC30-211ENST00000495044 CNKSR3Q6P9H4 555 aa8.68□□□□□ -1.02
CCDC30-211ENST00000495044 TMCO2Q7Z6W1 182 aaPredicted RBP8.68□□□□□ -1.02
CCDC30-211ENST00000495044 SIRT2Q8IXJ6 389 aa8.68□□□□□ -1.02
CCDC30-211ENST00000495044 IFNL3Q8IZI9 196 aa8.68□□□□□ -1.02
CCDC30-211ENST00000495044 SCFD2Q8WU76 684 aa8.68□□□□□ -1.02
CCDC30-211ENST00000495044 TGS1Q96RS0 853 aaKnown RBP8.68□□□□□ -1.02
CCDC30-211ENST00000495044 CHMP4BQ9H444 224 aaKnown RBP8.68□□□□□ -1.02
CCDC30-211ENST00000495044 CD320Q9NPF0 282 aa8.68□□□□□ -1.02
CCDC30-211ENST00000495044 RBM47A0AV96 593 aaKnown RBP8.67□□□□□ -1.02
CCDC30-211ENST00000495044 B4DLN1 442 aa8.67□□□□□ -1.02
CCDC30-211ENST00000495044 PATL2C9JE40 543 aaKnown RBP8.67□□□□□ -1.02
CCDC30-211ENST00000495044 NFIBO00712 420 aa8.67□□□□□ -1.02
CCDC30-211ENST00000495044 PARNO95453 639 aaKnown RBP8.67□□□□□ -1.02
CCDC30-211ENST00000495044 MRE11P49959 708 aa8.67□□□□□ -1.02
CCDC30-211ENST00000495044 MRPL12P52815 198 aaKnown RBP8.67□□□□□ -1.02
CCDC30-211ENST00000495044 DEFB103AP81534 67 aa8.67□□□□□ -1.02
CCDC30-211ENST00000495044 PPARAQ07869 468 aa8.67□□□□□ -1.02
CCDC30-211ENST00000495044 LEXMQ3ZCV2 418 aa8.67□□□□□ -1.02
CCDC30-211ENST00000495044 PTCRAQ6ISU1 281 aaPredicted RBP8.67□□□□□ -1.02
CCDC30-211ENST00000495044 LRRC8DQ7L1W4 858 aa8.67□□□□□ -1.02
CCDC30-211ENST00000495044 FAM178BQ8IXR5 827 aa8.67□□□□□ -1.02
CCDC30-211ENST00000495044 TET1Q8NFU7 2136 aa8.67□□□□□ -1.02
CCDC30-211ENST00000495044 A6NJR5 290 aa8.66□□□□□ -1.02
CCDC30-211ENST00000495044 SMARCA5O60264 1052 aaPredicted RBP8.66□□□□□ -1.02
CCDC30-211ENST00000495044 GABBR2O75899 941 aa8.66□□□□□ -1.02
CCDC30-211ENST00000495044 TXNP10599 105 aaKnown RBP8.66□□□□□ -1.02
CCDC30-211ENST00000495044 SELPP16109 830 aa8.66□□□□□ -1.02
CCDC30-211ENST00000495044 PUS10Q3MIT2 529 aaKnown RBP8.66□□□□□ -1.02
CCDC30-211ENST00000495044 SLC30A10Q6XR72 485 aa8.66□□□□□ -1.02
CCDC30-211ENST00000495044 RNF207Q6ZRF8 634 aa8.66□□□□□ -1.02
CCDC30-211ENST00000495044 RASGRP2Q7LDG7 609 aa8.66□□□□□ -1.02
CCDC30-211ENST00000495044 DCAF4Q8WV16 495 aa8.66□□□□□ -1.02
CCDC30-211ENST00000495044 RAD9AQ99638 391 aa8.66□□□□□ -1.02
CCDC30-211ENST00000495044 RANBP17Q9H2T7 1088 aaKnown RBP8.66□□□□□ -1.02
CCDC30-211ENST00000495044 SUGCTQ9HAC7 445 aa8.66□□□□□ -1.02
CCDC30-211ENST00000495044 EFCAB14O75071 495 aa8.66□□□□□ -1.02
CCDC30-211ENST00000495044 GJB5O95377 273 aa8.66□□□□□ -1.02
CCDC30-211ENST00000495044 IL9P15248 144 aa8.66□□□□□ -1.02
CCDC30-211ENST00000495044 ERVK-21P61565 698 aa8.66□□□□□ -1.02
CCDC30-211ENST00000495044 HNRNPUQ00839 825 aaKnown RBP eCLIP8.66□□□□□ -1.02
CCDC30-211ENST00000495044 FAM117BQ6P1L5 589 aa8.66□□□□□ -1.02
CCDC30-211ENST00000495044 FBXO22Q8NEZ5 403 aa8.66□□□□□ -1.02
CCDC30-211ENST00000495044 COPS5Q92905 334 aa8.66□□□□□ -1.02
CCDC30-211ENST00000495044 ZBTB40Q9NUA8 1239 aa8.66□□□□□ -1.02
CCDC30-211ENST00000495044 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.65□□□□□ -1.02
CCDC30-211ENST00000495044 ABHD14A-ACY1A0A1B0GW23 586 aa8.65□□□□□ -1.02
CCDC30-211ENST00000495044 LINC01553A4QN01 128 aa8.65□□□□□ -1.02
CCDC30-211ENST00000495044 RANBP6O60518 1105 aaKnown RBP8.65□□□□□ -1.02
CCDC30-211ENST00000495044 NMT2O60551 498 aa8.65□□□□□ -1.02
CCDC30-211ENST00000495044 SLC16A2P36021 539 aa8.65□□□□□ -1.02
CCDC30-211ENST00000495044 IKBKEQ14164 716 aa8.65□□□□□ -1.02
CCDC30-211ENST00000495044 PTPROQ16827 1216 aa8.65□□□□□ -1.02
CCDC30-211ENST00000495044 SYDE2Q5VT97 1194 aa8.65□□□□□ -1.02
CCDC30-211ENST00000495044 DNERQ8NFT8 737 aa8.65□□□□□ -1.02
CCDC30-211ENST00000495044 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.65□□□□□ -1.02
CCDC30-211ENST00000495044 CTNNA3Q9UI47 895 aa8.65□□□□□ -1.02
CCDC30-211ENST00000495044 PNMA2Q9UL42 364 aa8.65□□□□□ -1.02
CCDC30-211ENST00000495044 FAM50BQ9Y247 325 aa8.65□□□□□ -1.02
CCDC30-211ENST00000495044 MUC6Q6W4X9 2439 aa8.65□□□□□ -1.03
CCDC30-211ENST00000495044 DCXO43602 365 aa8.64□□□□□ -1.03
CCDC30-211ENST00000495044 NHLH1Q02575 133 aa8.64□□□□□ -1.03
CCDC30-211ENST00000495044 TSHZ3Q63HK5 1081 aa8.64□□□□□ -1.03
CCDC30-211ENST00000495044 GDF6Q6KF10 455 aaPredicted RBP8.64□□□□□ -1.03
CCDC30-211ENST00000495044 EP400NLQ6ZTU2 488 aa8.64□□□□□ -1.03
CCDC30-211ENST00000495044 KCNH6Q9H252 994 aa8.64□□□□□ -1.03
CCDC30-211ENST00000495044 FRMPD2Q68DX3 1309 aaPredicted RBP8.64□□□□□ -1.03
CCDC30-211ENST00000495044 GRXCR2A6NFK2 248 aa8.64□□□□□ -1.03
CCDC30-211ENST00000495044 MMP3P08254 477 aa8.64□□□□□ -1.03
CCDC30-211ENST00000495044 CKBP12277 381 aa8.64□□□□□ -1.03
CCDC30-211ENST00000495044 RPS6P62753 249 aaKnown RBP8.64□□□□□ -1.03
CCDC30-211ENST00000495044 CTDSPL2Q05D32 466 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms