RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 CDC37Q16543 378 aaPredicted RBP25.85■■□□□ 1.73
HDDC3-203ENST00000494993 RPUSD2Q8IZ73 545 aaKnown RBP25.85■■□□□ 1.73
HDDC3-203ENST00000494993 USP38Q8NB14 1042 aa25.85■■□□□ 1.73
HDDC3-203ENST00000494993 ANKS1AQ92625 1134 aa25.85■■□□□ 1.73
HDDC3-203ENST00000494993 COPS5Q92905 334 aa25.85■■□□□ 1.73
HDDC3-203ENST00000494993 SCLYQ96I15 445 aa25.85■■□□□ 1.73
HDDC3-203ENST00000494993 GAS2L1Q99501 681 aaPredicted RBP25.85■■□□□ 1.73
HDDC3-203ENST00000494993 DSCC1Q9BVC3 393 aa25.85■■□□□ 1.73
HDDC3-203ENST00000494993 B4E1Z4 1266 aa25.84■■□□□ 1.73
HDDC3-203ENST00000494993 CYP2C9P11712 490 aa25.84■■□□□ 1.73
HDDC3-203ENST00000494993 ZSCAN10Q96SZ4 725 aaPredicted RBP25.84■■□□□ 1.73
HDDC3-203ENST00000494993 MAF1Q9H063 256 aa25.84■■□□□ 1.73
HDDC3-203ENST00000494993 PRDM12Q9H4Q4 367 aa25.84■■□□□ 1.73
HDDC3-203ENST00000494993 ABCB11O95342 1321 aa25.84■■□□□ 1.73
HDDC3-203ENST00000494993 SPTBN5Q9NRC6 3674 aaKnown RBP25.84■■□□□ 1.73
HDDC3-203ENST00000494993 A6NJR5 290 aa25.83■■□□□ 1.73
HDDC3-203ENST00000494993 TXNP10599 105 aaKnown RBP25.83■■□□□ 1.73
HDDC3-203ENST00000494993 NBPF20Q3BBV1 942 aa25.83■■□□□ 1.73
HDDC3-203ENST00000494993 ASPRV1Q53RT3 343 aa25.83■■□□□ 1.73
HDDC3-203ENST00000494993 ADGRF4Q8IZF3 695 aa25.83■■□□□ 1.73
HDDC3-203ENST00000494993 ENAHQ8N8S7 591 aaPredicted RBP25.83■■□□□ 1.73
HDDC3-203ENST00000494993 EXOC6Q8TAG9 804 aa25.83■■□□□ 1.73
HDDC3-203ENST00000494993 VWCEQ96DN2 955 aa25.83■■□□□ 1.73
HDDC3-203ENST00000494993 YTHDC1Q96MU7 727 aaKnown RBP25.83■■□□□ 1.73
HDDC3-203ENST00000494993 KPNA6O60684 536 aa25.82■■□□□ 1.72
HDDC3-203ENST00000494993 TTLL4Q14679 1199 aa25.82■■□□□ 1.72
HDDC3-203ENST00000494993 IMMTQ16891 758 aaKnown RBP25.82■■□□□ 1.72
HDDC3-203ENST00000494993 TBC1D5Q92609 795 aa25.82■■□□□ 1.72
HDDC3-203ENST00000494993 NKX2-4Q9H2Z4 354 aa25.82■■□□□ 1.72
HDDC3-203ENST00000494993 ZSWIM5Q9P217 1185 aa25.82■■□□□ 1.72
HDDC3-203ENST00000494993 TET1Q8NFU7 2136 aa25.81■■□□□ 1.72
HDDC3-203ENST00000494993 ARIH2O95376 493 aa25.81■■□□□ 1.72
HDDC3-203ENST00000494993 FAM47CQ5HY64 1035 aa25.81■■□□□ 1.72
HDDC3-203ENST00000494993 NFRKBQ6P4R8 1299 aa25.81■■□□□ 1.72
HDDC3-203ENST00000494993 CTNNA3Q9UI47 895 aa25.81■■□□□ 1.72
HDDC3-203ENST00000494993 YBX2Q9Y2T7 364 aaKnown RBP25.81■■□□□ 1.72
HDDC3-203ENST00000494993 SLC4A7Q9Y6M7 1214 aa25.81■■□□□ 1.72
HDDC3-203ENST00000494993 PFKMP08237 780 aa25.8■■□□□ 1.72
HDDC3-203ENST00000494993 QRICH1Q2TAL8 776 aa25.8■■□□□ 1.72
HDDC3-203ENST00000494993 SYTL5Q8TDW5 730 aaPredicted RBP25.8■■□□□ 1.72
HDDC3-203ENST00000494993 KRT23Q9C075 422 aa25.8■■□□□ 1.72
HDDC3-203ENST00000494993 SLC28A3Q9HAS3 691 aa25.8■■□□□ 1.72
HDDC3-203ENST00000494993 TTC28Q96AY4 2481 aa25.8■■□□□ 1.72
HDDC3-203ENST00000494993 CHD7Q9P2D1 2997 aa25.8■■□□□ 1.72
HDDC3-203ENST00000494993 ZBBXA8MT70 800 aa25.79■■□□□ 1.72
HDDC3-203ENST00000494993 PARP1P09874 1014 aaKnown RBP25.79■■□□□ 1.72
HDDC3-203ENST00000494993 CCDC62Q6P9F0 684 aa25.79■■□□□ 1.72
HDDC3-203ENST00000494993 PPP1R13LQ8WUF5 828 aa25.79■■□□□ 1.72
HDDC3-203ENST00000494993 TAAR1Q96RJ0 339 aa25.79■■□□□ 1.72
HDDC3-203ENST00000494993 CNNM2Q9H8M5 875 aa25.79■■□□□ 1.72
HDDC3-203ENST00000494993 COL20A1Q9P218 1284 aa25.79■■□□□ 1.72
HDDC3-203ENST00000494993 PTPN11Q06124 597 aaPredicted RBP25.78■■□□□ 1.72
HDDC3-203ENST00000494993 FBXO11Q86XK2 927 aa25.78■■□□□ 1.72
HDDC3-203ENST00000494993 MCF2L2Q86YR7 1114 aa25.78■■□□□ 1.72
HDDC3-203ENST00000494993 NSUN6Q8TEA1 469 aaKnown RBP25.78■■□□□ 1.72
HDDC3-203ENST00000494993 JMJD4Q9H9V9 463 aa25.78■■□□□ 1.72
HDDC3-203ENST00000494993 MRPL11Q9Y3B7 192 aaKnown RBP25.78■■□□□ 1.72
HDDC3-203ENST00000494993 DHX16O60231 1041 aaKnown RBP25.77■■□□□ 1.72
HDDC3-203ENST00000494993 RABGGTBP53611 331 aa25.77■■□□□ 1.72
HDDC3-203ENST00000494993 ADGRE1Q14246 886 aa25.77■■□□□ 1.72
HDDC3-203ENST00000494993 DEFB128Q7Z7B8 93 aa25.77■■□□□ 1.72
HDDC3-203ENST00000494993 SYMPKQ92797 1274 aaKnown RBP25.77■■□□□ 1.72
HDDC3-203ENST00000494993 UBAC1Q9BSL1 405 aa25.77■■□□□ 1.72
HDDC3-203ENST00000494993 BAZ2BQ9UIF8 2168 aaKnown RBP25.77■■□□□ 1.72
HDDC3-203ENST00000494993 PITPNM1O00562 1244 aa25.76■■□□□ 1.71
HDDC3-203ENST00000494993 RFC2P35250 354 aa25.76■■□□□ 1.71
HDDC3-203ENST00000494993 SEPT14Q6ZU15 432 aa25.76■■□□□ 1.71
HDDC3-203ENST00000494993 PPM1EQ8WY54 764 aa25.76■■□□□ 1.71
HDDC3-203ENST00000494993 IWS1Q96ST2 819 aa25.76■■□□□ 1.71
HDDC3-203ENST00000494993 RMDN3Q96TC7 470 aa25.76■■□□□ 1.71
HDDC3-203ENST00000494993 IL25Q9H293 177 aa25.76■■□□□ 1.71
HDDC3-203ENST00000494993 VAT1LQ9HCJ6 419 aa25.76■■□□□ 1.71
HDDC3-203ENST00000494993 PRDM6Q9NQX0 595 aa25.76■■□□□ 1.71
HDDC3-203ENST00000494993 PCDHA11Q9Y5I1 949 aa25.76■■□□□ 1.71
HDDC3-203ENST00000494993 PTPRSQ13332 1948 aa25.76■■□□□ 1.71
HDDC3-203ENST00000494993 GH1P01241 217 aa25.75■■□□□ 1.71
HDDC3-203ENST00000494993 MMP3P08254 477 aa25.75■■□□□ 1.71
HDDC3-203ENST00000494993 ATP2A2P16615 1042 aaKnown RBP25.75■■□□□ 1.71
HDDC3-203ENST00000494993 ARHGAP1Q07960 439 aa25.75■■□□□ 1.71
HDDC3-203ENST00000494993 STXBP2Q15833 593 aa25.75■■□□□ 1.71
HDDC3-203ENST00000494993 LY6KQ17RY6 165 aa25.75■■□□□ 1.71
HDDC3-203ENST00000494993 IFIT1BQ5T764 474 aaKnown RBP25.75■■□□□ 1.71
HDDC3-203ENST00000494993 AFG1LQ8WV93 481 aa25.75■■□□□ 1.71
HDDC3-203ENST00000494993 IQCF3P0C7M6 154 aa25.74■■□□□ 1.71
HDDC3-203ENST00000494993 ACTN1P12814 892 aa25.74■■□□□ 1.71
HDDC3-203ENST00000494993 TJAP1Q5JTD0 557 aa25.74■■□□□ 1.71
HDDC3-203ENST00000494993 PPP2R2DQ66LE6 453 aa25.74■■□□□ 1.71
HDDC3-203ENST00000494993 STAG2Q8N3U4 1231 aa25.74■■□□□ 1.71
HDDC3-203ENST00000494993 RETREG2Q8NC44 543 aa25.74■■□□□ 1.71
HDDC3-203ENST00000494993 NOD1Q9Y239 953 aa25.74■■□□□ 1.71
HDDC3-203ENST00000494993 MYOGP15173 224 aa25.73■■□□□ 1.71
HDDC3-203ENST00000494993 EIF2AK2P19525 551 aaKnown RBP25.73■■□□□ 1.71
HDDC3-203ENST00000494993 IGFBP4P22692 258 aa25.73■■□□□ 1.71
HDDC3-203ENST00000494993 CHMP4BP1P59074 171 aa25.73■■□□□ 1.71
HDDC3-203ENST00000494993 BFSP2Q13515 415 aa25.73■■□□□ 1.71
HDDC3-203ENST00000494993 SEC23AQ15436 765 aa25.73■■□□□ 1.71
HDDC3-203ENST00000494993 ARHGEF16Q5VV41 709 aa25.73■■□□□ 1.71
HDDC3-203ENST00000494993 AMNQ9BXJ7 453 aa25.73■■□□□ 1.71
HDDC3-203ENST00000494993 CFBP00751 764 aa25.72■■□□□ 1.71
HDDC3-203ENST00000494993 CHST3Q7LGC8 479 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms