RNA–Protein interactions for RNA: ENST00000494867.1

USP34-221, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 3

Gene USP34, Length 795 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-221ENST00000494867 ST18O60284 1047 aa13.23□□□□□ -0.29
USP34-221ENST00000494867 PFKFB2O60825 505 aa13.23□□□□□ -0.29
USP34-221ENST00000494867 LARGE1O95461 756 aa13.23□□□□□ -0.29
USP34-221ENST00000494867 NAPAP54920 295 aa13.23□□□□□ -0.29
USP34-221ENST00000494867 CACNB2Q08289 660 aaPredicted RBP13.23□□□□□ -0.29
USP34-221ENST00000494867 SCRN1Q12765 414 aa13.23□□□□□ -0.29
USP34-221ENST00000494867 WWC2Q6AWC2 1192 aa13.23□□□□□ -0.29
USP34-221ENST00000494867 ARMCX2Q7L311 632 aa13.23□□□□□ -0.29
USP34-221ENST00000494867 GPIHBP1Q8IV16 184 aa13.23□□□□□ -0.29
USP34-221ENST00000494867 TRIM22Q8IYM9 498 aa13.23□□□□□ -0.29
USP34-221ENST00000494867 FAM133AQ8N9E0 248 aa13.23□□□□□ -0.29
USP34-221ENST00000494867 CUL5Q93034 780 aa13.23□□□□□ -0.29
USP34-221ENST00000494867 FGD4Q96M96 766 aa13.23□□□□□ -0.29
USP34-221ENST00000494867 PURBQ96QR8 312 aaKnown RBP13.23□□□□□ -0.29
USP34-221ENST00000494867 TINF2Q9BSI4 451 aa13.23□□□□□ -0.29
USP34-221ENST00000494867 RNF208Q9H0X6 261 aa13.23□□□□□ -0.29
USP34-221ENST00000494867 UNC93B1Q9H1C4 597 aa13.23□□□□□ -0.29
USP34-221ENST00000494867 RBM27Q9P2N5 1060 aaKnown RBP13.23□□□□□ -0.29
USP34-221ENST00000494867 ADD3Q9UEY8 706 aaKnown RBP13.23□□□□□ -0.29
USP34-221ENST00000494867 CNPY2Q9Y2B0 182 aa13.23□□□□□ -0.29
USP34-221ENST00000494867 V9GY48 417 aaPredicted RBP13.23□□□□□ -0.29
USP34-221ENST00000494867 SYNGAP1Q96PV0 1343 aa13.22□□□□□ -0.29
USP34-221ENST00000494867 SOWAHBA6NEL2 793 aa13.22□□□□□ -0.29
USP34-221ENST00000494867 ASB14A6NK59 587 aa13.22□□□□□ -0.29
USP34-221ENST00000494867 GCOM1H8Y6P7 765 aaPredicted RBP13.22□□□□□ -0.29
USP34-221ENST00000494867 hCG_1984214I3L0E3 225 aa13.22□□□□□ -0.29
USP34-221ENST00000494867 OPLAHO14841 1288 aa13.22□□□□□ -0.29
USP34-221ENST00000494867 CDKL5O76039 1030 aa13.22□□□□□ -0.29
USP34-221ENST00000494867 POLR2MP0CAP2 368 aa13.22□□□□□ -0.29
USP34-221ENST00000494867 SCG2P13521 617 aa13.22□□□□□ -0.29
USP34-221ENST00000494867 IFNAR1P17181 557 aa13.22□□□□□ -0.29
USP34-221ENST00000494867 CNGA1P29973 690 aa13.22□□□□□ -0.29
USP34-221ENST00000494867 HOXA13P31271 388 aaPredicted RBP13.22□□□□□ -0.29
USP34-221ENST00000494867 MLLT3P42568 568 aaPredicted RBP13.22□□□□□ -0.29
USP34-221ENST00000494867 ALDH5A1P51649 535 aaPredicted RBP13.22□□□□□ -0.29
USP34-221ENST00000494867 SOX10P56693 466 aa13.22□□□□□ -0.29
USP34-221ENST00000494867 SSRP1Q08945 709 aaKnown RBP13.22□□□□□ -0.29
USP34-221ENST00000494867 ME3Q16798 604 aa13.22□□□□□ -0.29
USP34-221ENST00000494867 ZNF713Q8N859 430 aaPredicted RBP13.22□□□□□ -0.29
USP34-221ENST00000494867 NECAB1Q8N987 351 aa13.22□□□□□ -0.29
USP34-221ENST00000494867 RGS22Q8NE09 1264 aa13.22□□□□□ -0.29
USP34-221ENST00000494867 TBC1D5Q92609 795 aa13.22□□□□□ -0.29
USP34-221ENST00000494867 MPHOSPH6Q99547 160 aaKnown RBP13.22□□□□□ -0.29
USP34-221ENST00000494867 RNF26Q9BY78 433 aaPredicted RBP13.22□□□□□ -0.29
USP34-221ENST00000494867 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.22□□□□□ -0.299e-13■■■■■ 72.1
USP34-221ENST00000494867 HMX1Q9NP08 348 aaPredicted RBP13.22□□□□□ -0.29
USP34-221ENST00000494867 ZHX1Q9UKY1 873 aaPredicted RBP13.22□□□□□ -0.29
USP34-221ENST00000494867 RPTORQ8N122 1335 aa13.21□□□□□ -0.29
USP34-221ENST00000494867 PRPF3O43395 683 aaKnown RBP13.21□□□□□ -0.29
USP34-221ENST00000494867 CYBAP13498 195 aa13.21□□□□□ -0.29
USP34-221ENST00000494867 CCND3P30281 292 aaPredicted RBP13.21□□□□□ -0.29
USP34-221ENST00000494867 HSD17B4P51659 736 aa13.21□□□□□ -0.29
USP34-221ENST00000494867 NTRK3Q16288 839 aa13.21□□□□□ -0.29
USP34-221ENST00000494867 PFKFB3Q16875 520 aaPredicted RBP13.21□□□□□ -0.29
USP34-221ENST00000494867 MAP3K21Q5TCX8 1036 aa13.21□□□□□ -0.29
USP34-221ENST00000494867 PPP1R18Q6NYC8 613 aa13.21□□□□□ -0.29
USP34-221ENST00000494867 MSL3Q8N5Y2 521 aaKnown RBP13.21□□□□□ -0.29
USP34-221ENST00000494867 SMARCC2Q8TAQ2 1214 aa13.21□□□□□ -0.29
USP34-221ENST00000494867 SYTL5Q8TDW5 730 aaPredicted RBP13.21□□□□□ -0.29
USP34-221ENST00000494867 GTF3C6Q969F1 213 aa13.21□□□□□ -0.29
USP34-221ENST00000494867 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.21□□□□□ -0.29
USP34-221ENST00000494867 COL20A1Q9P218 1284 aa13.21□□□□□ -0.29
USP34-221ENST00000494867 LIMCH1Q9UPQ0 1083 aa13.21□□□□□ -0.29
USP34-221ENST00000494867 DDX49Q9Y6V7 483 aaKnown RBP13.21□□□□□ -0.29
USP34-221ENST00000494867 FRMPD3Q5JV73 1810 aa13.2□□□□□ -0.3
USP34-221ENST00000494867 ASTN1O14525 1302 aa13.2□□□□□ -0.3
USP34-221ENST00000494867 MCM3APO60318 1980 aa13.2□□□□□ -0.3
USP34-221ENST00000494867 STXBP3O00186 592 aa13.2□□□□□ -0.3
USP34-221ENST00000494867 ADCY7P51828 1080 aa13.2□□□□□ -0.3
USP34-221ENST00000494867 PDE4DQ08499 809 aa13.2□□□□□ -0.3
USP34-221ENST00000494867 PRAMEF19Q5SWL8 479 aa13.2□□□□□ -0.3
USP34-221ENST00000494867 ARHGEF16Q5VV41 709 aa13.2□□□□□ -0.3
USP34-221ENST00000494867 MAMDC4Q6UXC1 1216 aa13.2□□□□□ -0.3
USP34-221ENST00000494867 FCHSD1Q86WN1 690 aa13.2□□□□□ -0.3
USP34-221ENST00000494867 PLPP6Q8IY26 295 aa13.2□□□□□ -0.3
USP34-221ENST00000494867 DNERQ8NFT8 737 aa13.2□□□□□ -0.3
USP34-221ENST00000494867 CCDC12Q8WUD4 166 aaPredicted RBP13.2□□□□□ -0.3
USP34-221ENST00000494867 MAF1Q9H063 256 aa13.2□□□□□ -0.3
USP34-221ENST00000494867 BARHL2Q9NY43 387 aa13.2□□□□□ -0.3
USP34-221ENST00000494867 B4DLN1 442 aa13.19□□□□□ -0.3
USP34-221ENST00000494867 DEXIO95424 95 aa13.19□□□□□ -0.3
USP34-221ENST00000494867 EIF2AK2P19525 551 aaKnown RBP13.19□□□□□ -0.3
USP34-221ENST00000494867 MRPL12P52815 198 aaKnown RBP13.19□□□□□ -0.3
USP34-221ENST00000494867 UBE2SQ16763 222 aa13.19□□□□□ -0.3
USP34-221ENST00000494867 USP17L6PQ6QN14 398 aa13.19□□□□□ -0.3
USP34-221ENST00000494867 EEPD1Q7L9B9 569 aa13.19□□□□□ -0.3
USP34-221ENST00000494867 CCDC83Q8IWF9 413 aa13.19□□□□□ -0.3
USP34-221ENST00000494867 FBXO16Q8IX29 292 aaPredicted RBP13.19□□□□□ -0.3
USP34-221ENST00000494867 SAMD3Q8N6K7 520 aa13.19□□□□□ -0.3
USP34-221ENST00000494867 TRPV1Q8NER1 839 aa13.19□□□□□ -0.3
USP34-221ENST00000494867 CCDC148Q8NFR7 591 aa13.19□□□□□ -0.3
USP34-221ENST00000494867 NSUN6Q8TEA1 469 aaKnown RBP13.19□□□□□ -0.3
USP34-221ENST00000494867 ZSCAN31Q96LW9 406 aaPredicted RBP13.19□□□□□ -0.3
USP34-221ENST00000494867 DEFB118Q96PH6 123 aa13.19□□□□□ -0.3
USP34-221ENST00000494867 TAAR1Q96RJ0 339 aa13.19□□□□□ -0.3
USP34-221ENST00000494867 RMDN3Q96TC7 470 aa13.19□□□□□ -0.3
USP34-221ENST00000494867 TMEM121BQ9BXQ6 578 aaPredicted RBP13.19□□□□□ -0.3
USP34-221ENST00000494867 PSTPIP2Q9H939 334 aa13.19□□□□□ -0.3
USP34-221ENST00000494867 MAP3K20Q9NYL2 800 aaKnown RBP13.19□□□□□ -0.3
USP34-221ENST00000494867 NRBP1Q9UHY1 535 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms