RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 GPHNQ9NQX3 736 aaPredicted RBP15.29■□□□□ 0.04
ERCC3-209ENST00000494464 PCDHA1Q9Y5I3 950 aa15.29■□□□□ 0.04
ERCC3-209ENST00000494464 PNMA6FA0A0J9YX94 578 aa15.28■□□□□ 0.04
ERCC3-209ENST00000494464 CCDC69A6NI79 296 aa15.28■□□□□ 0.04
ERCC3-209ENST00000494464 KIAA0355O15063 1070 aa15.28■□□□□ 0.04
ERCC3-209ENST00000494464 DYNC1LI2O43237 492 aaPredicted RBP15.28■□□□□ 0.04
ERCC3-209ENST00000494464 ZEB2O60315 1214 aa15.28■□□□□ 0.04
ERCC3-209ENST00000494464 PQBP1O60828 265 aaKnown RBP15.28■□□□□ 0.04
ERCC3-209ENST00000494464 CABYRO75952 493 aa15.28■□□□□ 0.04
ERCC3-209ENST00000494464 SMARCA1P28370 1054 aa15.28■□□□□ 0.04
ERCC3-209ENST00000494464 CDK7P50613 346 aa15.28■□□□□ 0.04
ERCC3-209ENST00000494464 BEX3Q00994 111 aa15.28■□□□□ 0.04
ERCC3-209ENST00000494464 PPP2R5BQ15173 497 aa15.28■□□□□ 0.04
ERCC3-209ENST00000494464 TSGA10IPQ3SY00 556 aa15.28■□□□□ 0.04
ERCC3-209ENST00000494464 TMEM63BQ5T3F8 832 aa15.28■□□□□ 0.04
ERCC3-209ENST00000494464 SGMS1Q86VZ5 419 aa15.28■□□□□ 0.04
ERCC3-209ENST00000494464 TAAR1Q96RJ0 339 aa15.28■□□□□ 0.04
ERCC3-209ENST00000494464 IWS1Q96ST2 819 aa15.28■□□□□ 0.04
ERCC3-209ENST00000494464 RMDN3Q96TC7 470 aa15.28■□□□□ 0.04
ERCC3-209ENST00000494464 PCDH10Q9P2E7 1040 aa15.28■□□□□ 0.04
ERCC3-209ENST00000494464 BAZ2BQ9UIF8 2168 aaKnown RBP15.27■□□□□ 0.04
ERCC3-209ENST00000494464 TRIM43BA6NCK2 446 aa15.27■□□□□ 0.04
ERCC3-209ENST00000494464 DCDC2CA8MYV0 355 aa15.27■□□□□ 0.04
ERCC3-209ENST00000494464 ARVCFO00192 962 aa15.27■□□□□ 0.04
ERCC3-209ENST00000494464 CFBP00751 764 aa15.27■□□□□ 0.04
ERCC3-209ENST00000494464 CALM1P0DP23 149 aa15.27■□□□□ 0.04
ERCC3-209ENST00000494464 CALM2P0DP24 149 aa15.27■□□□□ 0.04
ERCC3-209ENST00000494464 CALM3P0DP25 149 aa15.27■□□□□ 0.04
ERCC3-209ENST00000494464 PTGS1P23219 599 aa15.27■□□□□ 0.04
ERCC3-209ENST00000494464 GNAQP50148 359 aa15.27■□□□□ 0.04
ERCC3-209ENST00000494464 FAAP100Q0VG06 881 aa15.27■□□□□ 0.04
ERCC3-209ENST00000494464 LRIT3Q3SXY7 679 aa15.27■□□□□ 0.04
ERCC3-209ENST00000494464 NFXL1Q6ZNB6 911 aa15.27■□□□□ 0.04
ERCC3-209ENST00000494464 SH3RF1Q7Z6J0 888 aa15.27■□□□□ 0.04
ERCC3-209ENST00000494464 TRIM43Q96BQ3 446 aaPredicted RBP15.27■□□□□ 0.04
ERCC3-209ENST00000494464 NEK1Q96PY6 1258 aa15.27■□□□□ 0.04
ERCC3-209ENST00000494464 LZTS2Q9BRK4 669 aa15.27■□□□□ 0.04
ERCC3-209ENST00000494464 MYL10Q9BUA6 226 aa15.27■□□□□ 0.04
ERCC3-209ENST00000494464 SEZ6LQ9BYH1 1024 aa15.27■□□□□ 0.04
ERCC3-209ENST00000494464 CPT1AP50416 773 aa15.26■□□□□ 0.03
ERCC3-209ENST00000494464 KRT32Q14532 448 aa15.26■□□□□ 0.03
ERCC3-209ENST00000494464 TTLL4Q14679 1199 aa15.26■□□□□ 0.03
ERCC3-209ENST00000494464 CXCL17Q6UXB2 119 aa15.26■□□□□ 0.03
ERCC3-209ENST00000494464 SLC43A3Q8NBI5 491 aa15.26■□□□□ 0.03
ERCC3-209ENST00000494464 PXMP2Q9NR77 195 aa15.26■□□□□ 0.03
ERCC3-209ENST00000494464 TBX21Q9UL17 535 aa15.26■□□□□ 0.03
ERCC3-209ENST00000494464 SZT2Q5T011 3432 aa15.26■□□□□ 0.03
ERCC3-209ENST00000494464 SCN10AQ9Y5Y9 1956 aa15.26■□□□□ 0.03
ERCC3-209ENST00000494464 RBM25P49756 843 aaKnown RBP15.25■□□□□ 0.03
ERCC3-209ENST00000494464 STXBP2Q15833 593 aa15.25■□□□□ 0.03
ERCC3-209ENST00000494464 ARHGEF16Q5VV41 709 aa15.25■□□□□ 0.03
ERCC3-209ENST00000494464 CCDC62Q6P9F0 684 aa15.25■□□□□ 0.03
ERCC3-209ENST00000494464 FAM126BQ8IXS8 530 aa15.25■□□□□ 0.03
ERCC3-209ENST00000494464 RASEFQ8IZ41 740 aa15.25■□□□□ 0.03
ERCC3-209ENST00000494464 OR6J1Q8NGC5 347 aa15.25■□□□□ 0.03
ERCC3-209ENST00000494464 VTI1AQ96AJ9 217 aa15.25■□□□□ 0.03
ERCC3-209ENST00000494464 C22orf23Q9BZE7 217 aa15.25■□□□□ 0.03
ERCC3-209ENST00000494464 TMEM39AQ9NV64 488 aa15.25■□□□□ 0.03
ERCC3-209ENST00000494464 POLR3EQ9NVU0 708 aa15.25■□□□□ 0.03
ERCC3-209ENST00000494464 SLC12A7Q9Y666 1083 aa15.25■□□□□ 0.03
ERCC3-209ENST00000494464 SOX1O00570 391 aaPredicted RBP15.24■□□□□ 0.03
ERCC3-209ENST00000494464 ARIH2O95376 493 aa15.24■□□□□ 0.03
ERCC3-209ENST00000494464 PLEKHA8P1O95397 391 aa15.24■□□□□ 0.03
ERCC3-209ENST00000494464 TXNP10599 105 aaKnown RBP15.24■□□□□ 0.03
ERCC3-209ENST00000494464 EIF2AK2P19525 551 aaKnown RBP15.24■□□□□ 0.03
ERCC3-209ENST00000494464 EXOSC10Q01780 885 aaKnown RBP15.24■□□□□ 0.03
ERCC3-209ENST00000494464 DHX32Q7L7V1 743 aaKnown RBP15.24■□□□□ 0.03
ERCC3-209ENST00000494464 BADQ92934 168 aa15.24■□□□□ 0.03
ERCC3-209ENST00000494464 KCNB2Q92953 911 aa15.24■□□□□ 0.03
ERCC3-209ENST00000494464 RRP36Q96EU6 259 aaKnown RBP15.24■□□□□ 0.03
ERCC3-209ENST00000494464 PDCD2LQ9BRP1 358 aa15.24■□□□□ 0.03
ERCC3-209ENST00000494464 LRRC2Q9BYS8 371 aa15.24■□□□□ 0.03
ERCC3-209ENST00000494464 SEC63Q9UGP8 760 aaKnown RBP15.24■□□□□ 0.03
ERCC3-209ENST00000494464 FRMPD4Q14CM0 1322 aa15.24■□□□□ 0.03
ERCC3-209ENST00000494464 A6NJR5 290 aa15.24■□□□□ 0.03
ERCC3-209ENST00000494464 GCOM1H8Y6P7 765 aaPredicted RBP15.24■□□□□ 0.03
ERCC3-209ENST00000494464 TLR3O15455 904 aaKnown RBP15.24■□□□□ 0.03
ERCC3-209ENST00000494464 EIF3JO75822 258 aaKnown RBP15.24■□□□□ 0.03
ERCC3-209ENST00000494464 NR3C2P08235 984 aa15.24■□□□□ 0.03
ERCC3-209ENST00000494464 HMGB1P09429 215 aaKnown RBP15.24■□□□□ 0.03
ERCC3-209ENST00000494464 POLR2MP0CAP2 368 aa15.24■□□□□ 0.03
ERCC3-209ENST00000494464 RAG1P15918 1043 aa15.24■□□□□ 0.03
ERCC3-209ENST00000494464 ITGB8P26012 769 aa15.24■□□□□ 0.03
ERCC3-209ENST00000494464 PURAQ00577 322 aaKnown RBP15.24■□□□□ 0.03
ERCC3-209ENST00000494464 ITGA7Q13683 1181 aa15.24■□□□□ 0.03
ERCC3-209ENST00000494464 ADCK5Q3MIX3 580 aa15.24■□□□□ 0.03
ERCC3-209ENST00000494464 BRDTQ58F21 947 aaPredicted RBP15.24■□□□□ 0.03
ERCC3-209ENST00000494464 GPR153Q6NV75 609 aa15.24■□□□□ 0.03
ERCC3-209ENST00000494464 APOA5Q6Q788 366 aa15.24■□□□□ 0.03
ERCC3-209ENST00000494464 GRIN2DO15399 1336 aa15.23■□□□□ 0.03
ERCC3-209ENST00000494464 EPB41L2O43491 1005 aaKnown RBP15.23■□□□□ 0.03
ERCC3-209ENST00000494464 KPNA6O60684 536 aa15.23■□□□□ 0.03
ERCC3-209ENST00000494464 REC8O95072 547 aa15.23■□□□□ 0.03
ERCC3-209ENST00000494464 CD4P01730 458 aa15.23■□□□□ 0.03
ERCC3-209ENST00000494464 RXRAP19793 462 aa15.23■□□□□ 0.03
ERCC3-209ENST00000494464 HOXA13P31271 388 aaPredicted RBP15.23■□□□□ 0.03
ERCC3-209ENST00000494464 HSPA4P34932 840 aa15.23■□□□□ 0.03
ERCC3-209ENST00000494464 PGM5Q15124 567 aa15.23■□□□□ 0.03
ERCC3-209ENST00000494464 SEPT14Q6ZU15 432 aa15.23■□□□□ 0.03
ERCC3-209ENST00000494464 TMTC3Q6ZXV5 915 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms