RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 PIK3CDO00329 1044 aa14.33□□□□□ -0.11
TRA2A-209ENST00000494255 SEPT4O43236 478 aa14.33□□□□□ -0.11
TRA2A-209ENST00000494255 CAPN15O75808 1086 aa14.33□□□□□ -0.11
TRA2A-209ENST00000494255 EIF2AK2P19525 551 aaKnown RBP14.33□□□□□ -0.11
TRA2A-209ENST00000494255 MCM2P49736 904 aa14.33□□□□□ -0.11
TRA2A-209ENST00000494255 USP17L6PQ6QN14 398 aa14.33□□□□□ -0.11
TRA2A-209ENST00000494255 MORC4Q8TE76 937 aa14.33□□□□□ -0.11
TRA2A-209ENST00000494255 IWS1Q96ST2 819 aa14.33□□□□□ -0.11
TRA2A-209ENST00000494255 PXMP2Q9NR77 195 aa14.33□□□□□ -0.11
TRA2A-209ENST00000494255 STK36Q9NRP7 1315 aa14.33□□□□□ -0.12
TRA2A-209ENST00000494255 SMCO2A6NFE2 343 aa14.33□□□□□ -0.12
TRA2A-209ENST00000494255 ZNF865P0CJ78 1059 aaPredicted RBP14.33□□□□□ -0.12
TRA2A-209ENST00000494255 TYW1BQ6NUM6 668 aa14.33□□□□□ -0.12
TRA2A-209ENST00000494255 U2AF1L4Q8WU68 220 aaKnown RBP14.33□□□□□ -0.12
TRA2A-209ENST00000494255 WASF1Q92558 559 aa14.33□□□□□ -0.12
TRA2A-209ENST00000494255 EHMT1Q9H9B1 1298 aa14.33□□□□□ -0.12
TRA2A-209ENST00000494255 C6orf50Q9HD87 102 aa14.33□□□□□ -0.12
TRA2A-209ENST00000494255 VTA1Q9NP79 307 aa14.33□□□□□ -0.12
TRA2A-209ENST00000494255 RIC8AQ9NPQ8 531 aa14.33□□□□□ -0.12
TRA2A-209ENST00000494255 SH3GLB2Q9NR46 395 aa14.33□□□□□ -0.12
TRA2A-209ENST00000494255 ORC3Q9UBD5 711 aaPredicted RBP14.33□□□□□ -0.12
TRA2A-209ENST00000494255 DDX20Q9UHI6 824 aaKnown RBP14.33□□□□□ -0.12
TRA2A-209ENST00000494255 FAM184BQ9ULE4 1060 aa14.33□□□□□ -0.12
TRA2A-209ENST00000494255 ESYT2A0FGR8 921 aa14.32□□□□□ -0.12
TRA2A-209ENST00000494255 POTEFA5A3E0 1075 aa14.32□□□□□ -0.12
TRA2A-209ENST00000494255 SPDYE3A6NKU9 549 aa14.32□□□□□ -0.12
TRA2A-209ENST00000494255 MEIS2O14770 477 aa14.32□□□□□ -0.12
TRA2A-209ENST00000494255 SGPL1O95470 568 aa14.32□□□□□ -0.12
TRA2A-209ENST00000494255 TFRCP02786 760 aaKnown RBP14.32□□□□□ -0.12
TRA2A-209ENST00000494255 AKR1A1P14550 325 aa14.32□□□□□ -0.12
TRA2A-209ENST00000494255 CAPN2P17655 700 aa14.32□□□□□ -0.12
TRA2A-209ENST00000494255 EDNRBP24530 442 aa14.32□□□□□ -0.12
TRA2A-209ENST00000494255 GJA8P48165 433 aa14.32□□□□□ -0.12
TRA2A-209ENST00000494255 STXBP2Q15833 593 aa14.32□□□□□ -0.12
TRA2A-209ENST00000494255 UBE2SQ16763 222 aa14.32□□□□□ -0.12
TRA2A-209ENST00000494255 EEPD1Q7L9B9 569 aa14.32□□□□□ -0.12
TRA2A-209ENST00000494255 CCDC83Q8IWF9 413 aa14.32□□□□□ -0.12
TRA2A-209ENST00000494255 FBXO16Q8IX29 292 aaPredicted RBP14.32□□□□□ -0.12
TRA2A-209ENST00000494255 DDX49Q9Y6V7 483 aaKnown RBP14.32□□□□□ -0.12
TRA2A-209ENST00000494255 LRRC37A2A6NM11 1700 aa14.31□□□□□ -0.12
TRA2A-209ENST00000494255 HTTP42858 3142 aa14.31□□□□□ -0.12
TRA2A-209ENST00000494255 NR3C2P08235 984 aa14.31□□□□□ -0.12
TRA2A-209ENST00000494255 XBP1P17861 261 aa14.31□□□□□ -0.12
TRA2A-209ENST00000494255 GNA11P29992 359 aa14.31□□□□□ -0.12
TRA2A-209ENST00000494255 CCND2P30279 289 aa14.31□□□□□ -0.12
TRA2A-209ENST00000494255 FAM177A1Q8N128 213 aaPredicted RBP14.31□□□□□ -0.12
TRA2A-209ENST00000494255 BICD2Q8TD16 824 aa14.31□□□□□ -0.12
TRA2A-209ENST00000494255 PDCD2LQ9BRP1 358 aa14.31□□□□□ -0.12
TRA2A-209ENST00000494255 ZMYND12Q9H0C1 365 aa14.31□□□□□ -0.12
TRA2A-209ENST00000494255 VPS54Q9P1Q0 977 aa14.31□□□□□ -0.12
TRA2A-209ENST00000494255 CTDNEP1O95476 244 aa14.3□□□□□ -0.12
TRA2A-209ENST00000494255 FOSP01100 380 aaPredicted RBP14.3□□□□□ -0.12
TRA2A-209ENST00000494255 RARBP10826 455 aa14.3□□□□□ -0.12
TRA2A-209ENST00000494255 MYCLP12524 364 aaPredicted RBP14.3□□□□□ -0.12
TRA2A-209ENST00000494255 NLRP5P59047 1200 aa14.3□□□□□ -0.12
TRA2A-209ENST00000494255 PGM5Q15124 567 aa14.3□□□□□ -0.12
TRA2A-209ENST00000494255 CCDC144BQ3MJ40 725 aa14.3□□□□□ -0.12
TRA2A-209ENST00000494255 NSUN7Q8NE18 718 aaKnown RBP14.3□□□□□ -0.12
TRA2A-209ENST00000494255 LLPHQ9BRT6 129 aaKnown RBP14.3□□□□□ -0.12
TRA2A-209ENST00000494255 KATNBL1Q9H079 304 aa14.3□□□□□ -0.12
TRA2A-209ENST00000494255 EN2P19622 333 aaPredicted RBP14.3□□□□□ -0.12
TRA2A-209ENST00000494255 ANO1Q5XXA6 986 aa14.3□□□□□ -0.12
TRA2A-209ENST00000494255 MCTP2Q6DN12 878 aa14.3□□□□□ -0.12
TRA2A-209ENST00000494255 CRISPLD2Q9H0B8 497 aa14.3□□□□□ -0.12
TRA2A-209ENST00000494255 FRMPD3Q5JV73 1810 aa14.29□□□□□ -0.12
TRA2A-209ENST00000494255 FRMPD4Q14CM0 1322 aa14.29□□□□□ -0.12
TRA2A-209ENST00000494255 KIAA0100Q14667 2235 aaKnown RBP14.29□□□□□ -0.12
TRA2A-209ENST00000494255 EIF3JO75822 258 aaKnown RBP14.29□□□□□ -0.12
TRA2A-209ENST00000494255 TNFAIP2Q03169 654 aa14.29□□□□□ -0.12
TRA2A-209ENST00000494255 ST3GAL1Q11201 340 aa14.29□□□□□ -0.12
TRA2A-209ENST00000494255 AP3B2Q13367 1082 aa14.29□□□□□ -0.12
TRA2A-209ENST00000494255 LHX8Q68G74 356 aa14.29□□□□□ -0.12
TRA2A-209ENST00000494255 IQSEC1Q6DN90 963 aa14.29□□□□□ -0.12
TRA2A-209ENST00000494255 REXO1Q8N1G1 1221 aaKnown RBP14.29□□□□□ -0.12
TRA2A-209ENST00000494255 TMX3Q96JJ7 454 aa14.29□□□□□ -0.12
TRA2A-209ENST00000494255 AIFM3Q96NN9 605 aa14.29□□□□□ -0.12
TRA2A-209ENST00000494255 ALG1Q9BT22 464 aa14.29□□□□□ -0.12
TRA2A-209ENST00000494255 OGDHLQ9ULD0 1010 aa14.29□□□□□ -0.12
TRA2A-209ENST00000494255 PCDHA6Q9UN73 950 aa14.29□□□□□ -0.12
TRA2A-209ENST00000494255 PCDHA8Q9Y5H6 950 aa14.29□□□□□ -0.12
TRA2A-209ENST00000494255 JAK2O60674 1132 aa14.28□□□□□ -0.12
TRA2A-209ENST00000494255 DTNBO60941 627 aa14.28□□□□□ -0.12
TRA2A-209ENST00000494255 DUSP11O75319 330 aaKnown RBP14.28□□□□□ -0.12
TRA2A-209ENST00000494255 CD2BP2O95400 341 aaKnown RBP14.28□□□□□ -0.12
TRA2A-209ENST00000494255 ADCYAP1R1P41586 468 aa14.28□□□□□ -0.12
TRA2A-209ENST00000494255 HMGN5P82970 282 aaKnown RBP14.28□□□□□ -0.12
TRA2A-209ENST00000494255 TAPT1Q6NXT6 567 aa14.28□□□□□ -0.12
TRA2A-209ENST00000494255 XRRA1Q6P2D8 792 aa14.28□□□□□ -0.12
TRA2A-209ENST00000494255 VSIG10LQ86VR7 867 aa14.28□□□□□ -0.12
TRA2A-209ENST00000494255 IL31RAQ8NI17 732 aa14.28□□□□□ -0.12
TRA2A-209ENST00000494255 SCFD2Q8WU76 684 aa14.28□□□□□ -0.12
TRA2A-209ENST00000494255 SHISA4Q96DD7 197 aa14.28□□□□□ -0.12
TRA2A-209ENST00000494255 ANO3Q9BYT9 981 aa14.28□□□□□ -0.12
TRA2A-209ENST00000494255 SPC25Q9HBM1 224 aa14.28□□□□□ -0.12
TRA2A-209ENST00000494255 XPNPEP3Q9NQH7 507 aa14.28□□□□□ -0.12
TRA2A-209ENST00000494255 PDGFCQ9NRA1 345 aa14.28□□□□□ -0.12
TRA2A-209ENST00000494255 KIAA1217Q5T5P2 1943 aa14.27□□□□□ -0.12
TRA2A-209ENST00000494255 STAM2O75886 525 aa14.27□□□□□ -0.12
TRA2A-209ENST00000494255 TTLL4Q14679 1199 aa14.27□□□□□ -0.12
TRA2A-209ENST00000494255 JAKMIP3Q5VZ66 844 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms