RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 TRIM9Q9C026 710 aa11.99□□□□□ -0.49
CLCN6-208ENST00000494028 SH2D4AQ9H788 454 aa11.99□□□□□ -0.49
CLCN6-208ENST00000494028 KCNMB3Q9NPA1 279 aa11.99□□□□□ -0.49
CLCN6-208ENST00000494028 BLOC1S4Q9NUP1 217 aa11.99□□□□□ -0.49
CLCN6-208ENST00000494028 PPP1R1BQ9UD71 204 aaPredicted RBP11.99□□□□□ -0.49
CLCN6-208ENST00000494028 RWDD2AQ9UIY3 292 aa11.99□□□□□ -0.49
CLCN6-208ENST00000494028 KDM3AQ9Y4C1 1321 aa11.98□□□□□ -0.49
CLCN6-208ENST00000494028 CYP3A7-CYP3A51PA0A087WV96 503 aa11.98□□□□□ -0.49
CLCN6-208ENST00000494028 PHF20L1A8MW92 1017 aa11.98□□□□□ -0.49
CLCN6-208ENST00000494028 FZD9O00144 591 aa11.98□□□□□ -0.49
CLCN6-208ENST00000494028 PLA2G6O60733 806 aa11.98□□□□□ -0.49
CLCN6-208ENST00000494028 CYP3A7P24462 503 aa11.98□□□□□ -0.49
CLCN6-208ENST00000494028 ARHGAP4P98171 946 aa11.98□□□□□ -0.49
CLCN6-208ENST00000494028 SEMA3FQ13275 785 aa11.98□□□□□ -0.49
CLCN6-208ENST00000494028 TNFAIP1Q13829 316 aa11.98□□□□□ -0.49
CLCN6-208ENST00000494028 RASA3Q14644 834 aa11.98□□□□□ -0.49
CLCN6-208ENST00000494028 KIF4BQ2VIQ3 1234 aa11.98□□□□□ -0.49
CLCN6-208ENST00000494028 HSP90AA4PQ58FG1 418 aa11.98□□□□□ -0.49
CLCN6-208ENST00000494028 MCTP2Q6DN12 878 aa11.98□□□□□ -0.49
CLCN6-208ENST00000494028 MIGA2Q7L4E1 593 aa11.98□□□□□ -0.49
CLCN6-208ENST00000494028 FAM160B2Q86V87 743 aa11.98□□□□□ -0.49
CLCN6-208ENST00000494028 NELFBQ8WX92 580 aa11.98□□□□□ -0.49
CLCN6-208ENST00000494028 CALML4Q96GE6 196 aa11.98□□□□□ -0.49
CLCN6-208ENST00000494028 C7orf25Q9BPX7 421 aa11.98□□□□□ -0.49
CLCN6-208ENST00000494028 RAB34Q9BZG1 259 aa11.98□□□□□ -0.49
CLCN6-208ENST00000494028 LRWD1Q9UFC0 647 aa11.98□□□□□ -0.49
CLCN6-208ENST00000494028 A0A1B0GTH6 734 aa11.97□□□□□ -0.49
CLCN6-208ENST00000494028 PIK3CDO00329 1044 aa11.97□□□□□ -0.49
CLCN6-208ENST00000494028 ASNSP08243 561 aa11.97□□□□□ -0.49
CLCN6-208ENST00000494028 ASIC1P78348 528 aa11.97□□□□□ -0.49
CLCN6-208ENST00000494028 ZYXQ15942 572 aaKnown RBP11.97□□□□□ -0.49
CLCN6-208ENST00000494028 HYIQ5T013 277 aa11.97□□□□□ -0.49
CLCN6-208ENST00000494028 KCNK18Q7Z418 384 aa11.97□□□□□ -0.49
CLCN6-208ENST00000494028 TEX2Q8IWB9 1127 aa11.97□□□□□ -0.49
CLCN6-208ENST00000494028 ADSSL1Q8N142 457 aa11.97□□□□□ -0.49
CLCN6-208ENST00000494028 ETNPPLQ8TBG4 499 aa11.97□□□□□ -0.49
CLCN6-208ENST00000494028 LENG9Q96B70 501 aa11.97□□□□□ -0.49
CLCN6-208ENST00000494028 NUDT12Q9BQG2 462 aa11.97□□□□□ -0.49
CLCN6-208ENST00000494028 SCAF8Q9UPN6 1271 aaKnown RBP11.97□□□□□ -0.49
CLCN6-208ENST00000494028 LCTP09848 1927 aa11.97□□□□□ -0.49
CLCN6-208ENST00000494028 SLC26A4O43511 780 aa11.96□□□□□ -0.49
CLCN6-208ENST00000494028 SFPQP23246 707 aaKnown RBP eCLIP11.96□□□□□ -0.49
CLCN6-208ENST00000494028 PRCPP42785 496 aa11.96□□□□□ -0.49
CLCN6-208ENST00000494028 KCNJ6P48051 423 aa11.96□□□□□ -0.49
CLCN6-208ENST00000494028 USP11P51784 963 aa11.96□□□□□ -0.49
CLCN6-208ENST00000494028 TBX2Q13207 712 aaPredicted RBP11.96□□□□□ -0.49
CLCN6-208ENST00000494028 DHX8Q14562 1220 aaKnown RBP11.96□□□□□ -0.49
CLCN6-208ENST00000494028 PTPN21Q16825 1174 aa11.96□□□□□ -0.49
CLCN6-208ENST00000494028 TBC1D10BQ4KMP7 808 aaPredicted RBP11.96□□□□□ -0.49
CLCN6-208ENST00000494028 GIMAP8Q8ND71 665 aaPredicted RBP11.96□□□□□ -0.49
CLCN6-208ENST00000494028 LARP4BQ92615 738 aaKnown RBP11.96□□□□□ -0.49
CLCN6-208ENST00000494028 RAD54LQ92698 747 aa11.96□□□□□ -0.49
CLCN6-208ENST00000494028 GJA10Q969M2 543 aa11.96□□□□□ -0.49
CLCN6-208ENST00000494028 FEZ1Q99689 392 aa11.96□□□□□ -0.49
CLCN6-208ENST00000494028 ZNF341Q9BYN7 854 aa11.96□□□□□ -0.49
CLCN6-208ENST00000494028 EXOC1Q9NV70 894 aa11.96□□□□□ -0.49
CLCN6-208ENST00000494028 FBXO28Q9NVF7 368 aa11.96□□□□□ -0.49
CLCN6-208ENST00000494028 HACL1Q9UJ83 578 aa11.96□□□□□ -0.49
CLCN6-208ENST00000494028 LRRC37A2A6NM11 1700 aa11.95□□□□□ -0.5
CLCN6-208ENST00000494028 ABCB11O95342 1321 aa11.95□□□□□ -0.5
CLCN6-208ENST00000494028 TRIM49BA6NDI0 452 aa11.95□□□□□ -0.5
CLCN6-208ENST00000494028 MYMKA6NI61 221 aa11.95□□□□□ -0.5
CLCN6-208ENST00000494028 SPDYE3A6NKU9 549 aa11.95□□□□□ -0.5
CLCN6-208ENST00000494028 COBLO75128 1261 aa11.95□□□□□ -0.5
CLCN6-208ENST00000494028 FOSP01100 380 aaPredicted RBP11.95□□□□□ -0.5
CLCN6-208ENST00000494028 SKILP12757 684 aa11.95□□□□□ -0.5
CLCN6-208ENST00000494028 CIITAP33076 1130 aa11.95□□□□□ -0.5
CLCN6-208ENST00000494028 PBX1P40424 430 aa11.95□□□□□ -0.5
CLCN6-208ENST00000494028 SPIRE1Q08AE8 756 aa11.95□□□□□ -0.5
CLCN6-208ENST00000494028 PDIA5Q14554 519 aa11.95□□□□□ -0.5
CLCN6-208ENST00000494028 MCM6Q14566 821 aa11.95□□□□□ -0.5
CLCN6-208ENST00000494028 ECM1Q16610 540 aa11.95□□□□□ -0.5
CLCN6-208ENST00000494028 Q4G0T1 1027 aa11.95□□□□□ -0.5
CLCN6-208ENST00000494028 COBLL1Q53SF7 1204 aa11.95□□□□□ -0.5
CLCN6-208ENST00000494028 KRT79Q5XKE5 535 aa11.95□□□□□ -0.5
CLCN6-208ENST00000494028 CNNM4Q6P4Q7 775 aa11.95□□□□□ -0.5
CLCN6-208ENST00000494028 CCDC174Q6PII3 467 aa11.95□□□□□ -0.5
CLCN6-208ENST00000494028 SAMD7Q7Z3H4 446 aa11.95□□□□□ -0.5
CLCN6-208ENST00000494028 KIAA0895Q8NCT3 520 aa11.95□□□□□ -0.5
CLCN6-208ENST00000494028 KIFC2Q96AC6 838 aa11.95□□□□□ -0.5
CLCN6-208ENST00000494028 CDK5RAP3Q96JB5 506 aa11.95□□□□□ -0.5
CLCN6-208ENST00000494028 GINM1Q9NU53 330 aa11.95□□□□□ -0.5
CLCN6-208ENST00000494028 ADD3Q9UEY8 706 aaKnown RBP11.95□□□□□ -0.5
CLCN6-208ENST00000494028 LIMA1Q9UHB6 759 aaKnown RBP11.95□□□□□ -0.5
CLCN6-208ENST00000494028 FEM1BQ9UK73 627 aa11.95□□□□□ -0.5
CLCN6-208ENST00000494028 GJA3Q9Y6H8 435 aa11.95□□□□□ -0.5
CLCN6-208ENST00000494028 PSMA7O14818 248 aa11.94□□□□□ -0.5
CLCN6-208ENST00000494028 TBX3O15119 743 aa11.94□□□□□ -0.5
CLCN6-208ENST00000494028 WDR46O15213 610 aaKnown RBP11.94□□□□□ -0.5
CLCN6-208ENST00000494028 CYP3A4P08684 503 aa11.94□□□□□ -0.5
CLCN6-208ENST00000494028 YBX3P16989 372 aaKnown RBP eCLIP11.94□□□□□ -0.5
CLCN6-208ENST00000494028 HOXA13P31271 388 aaPredicted RBP11.94□□□□□ -0.5
CLCN6-208ENST00000494028 PMS1P54277 932 aaKnown RBP11.94□□□□□ -0.5
CLCN6-208ENST00000494028 SPAG1Q07617 926 aa11.94□□□□□ -0.5
CLCN6-208ENST00000494028 PDE4DQ08499 809 aa11.94□□□□□ -0.5
CLCN6-208ENST00000494028 TRAF1Q13077 416 aa11.94□□□□□ -0.5
CLCN6-208ENST00000494028 KRT31Q15323 416 aa11.94□□□□□ -0.5
CLCN6-208ENST00000494028 TTI2Q6NXR4 508 aa11.94□□□□□ -0.5
CLCN6-208ENST00000494028 UNC13DQ70J99 1090 aa11.94□□□□□ -0.5
CLCN6-208ENST00000494028 TMEM139Q8IV31 216 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms