RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 SLC4A7Q9Y6M7 1214 aa12.17□□□□□ -0.46
PDLIM1-205ENST00000493949 A0A0U1RQG5 324 aaPredicted RBP12.16□□□□□ -0.46
PDLIM1-205ENST00000493949 RFXAPO00287 272 aa12.16□□□□□ -0.46
PDLIM1-205ENST00000493949 IGSF3O75054 1194 aa12.16□□□□□ -0.46
PDLIM1-205ENST00000493949 DUSP11O75319 330 aaKnown RBP12.16□□□□□ -0.46
PDLIM1-205ENST00000493949 RPS6KB1P23443 525 aa12.16□□□□□ -0.46
PDLIM1-205ENST00000493949 ARID4AP29374 1257 aaPredicted RBP12.16□□□□□ -0.46
PDLIM1-205ENST00000493949 CYP2C18P33260 490 aa12.16□□□□□ -0.46
PDLIM1-205ENST00000493949 GSDMDP57764 484 aa12.16□□□□□ -0.46
PDLIM1-205ENST00000493949 DYNLL1P63167 89 aaKnown RBP12.16□□□□□ -0.46
PDLIM1-205ENST00000493949 ZNF792Q3KQV3 632 aa12.16□□□□□ -0.46
PDLIM1-205ENST00000493949 TSHZ3Q63HK5 1081 aa12.16□□□□□ -0.46
PDLIM1-205ENST00000493949 CREB3L3Q68CJ9 461 aa12.16□□□□□ -0.46
PDLIM1-205ENST00000493949 GIMAP6Q6P9H5 292 aa12.16□□□□□ -0.46
PDLIM1-205ENST00000493949 CWC27Q6UX04 472 aaKnown RBP12.16□□□□□ -0.46
PDLIM1-205ENST00000493949 NOL8Q76FK4 1167 aaKnown RBP12.16□□□□□ -0.46
PDLIM1-205ENST00000493949 TTC6Q86TZ1 520 aa12.16□□□□□ -0.46
PDLIM1-205ENST00000493949 NCAPG2Q86XI2 1143 aa12.16□□□□□ -0.46
PDLIM1-205ENST00000493949 GJD3Q8N144 294 aa12.16□□□□□ -0.46
PDLIM1-205ENST00000493949 MSL3Q8N5Y2 521 aaKnown RBP12.16□□□□□ -0.46
PDLIM1-205ENST00000493949 PCSK9Q8NBP7 692 aaKnown RBP12.16□□□□□ -0.46
PDLIM1-205ENST00000493949 SPATA32Q96LK8 384 aa12.16□□□□□ -0.46
PDLIM1-205ENST00000493949 AKAP2Q9Y2D5 859 aa12.16□□□□□ -0.46
PDLIM1-205ENST00000493949 MYH8P13535 1937 aa12.15□□□□□ -0.46
PDLIM1-205ENST00000493949 VPS37CA5D8V6 355 aaPredicted RBP12.15□□□□□ -0.46
PDLIM1-205ENST00000493949 EPOPA6NHQ4 379 aa12.15□□□□□ -0.46
PDLIM1-205ENST00000493949 NRDCO43847 1150 aa12.15□□□□□ -0.46
PDLIM1-205ENST00000493949 SLC25A27O95847 323 aa12.15□□□□□ -0.46
PDLIM1-205ENST00000493949 GUCY1A2P33402 732 aa12.15□□□□□ -0.46
PDLIM1-205ENST00000493949 OS9Q13438 667 aaPredicted RBP12.15□□□□□ -0.46
PDLIM1-205ENST00000493949 STX1AQ16623 288 aa12.15□□□□□ -0.46
PDLIM1-205ENST00000493949 ABCB5Q2M3G0 1257 aa12.15□□□□□ -0.46
PDLIM1-205ENST00000493949 NAA16Q6N069 864 aaPredicted RBP12.15□□□□□ -0.46
PDLIM1-205ENST00000493949 FAM178BQ8IXR5 827 aa12.15□□□□□ -0.46
PDLIM1-205ENST00000493949 SLC43A3Q8NBI5 491 aa12.15□□□□□ -0.46
PDLIM1-205ENST00000493949 CCDC112Q8NEF3 446 aa12.15□□□□□ -0.46
PDLIM1-205ENST00000493949 VWCEQ96DN2 955 aa12.15□□□□□ -0.46
PDLIM1-205ENST00000493949 IL25Q9H293 177 aa12.15□□□□□ -0.46
PDLIM1-205ENST00000493949 IMPACTQ9P2X3 320 aa12.15□□□□□ -0.46
PDLIM1-205ENST00000493949 RBM8AQ9Y5S9 174 aaKnown RBP12.15□□□□□ -0.46
PDLIM1-205ENST00000493949 SCN5AQ14524 2016 aa12.15□□□□□ -0.47
PDLIM1-205ENST00000493949 C5orf42Q9H799 3197 aa12.14□□□□□ -0.47
PDLIM1-205ENST00000493949 POTEB3A0JP26 581 aa12.14□□□□□ -0.47
PDLIM1-205ENST00000493949 MYADML2A6NDP7 307 aa12.14□□□□□ -0.47
PDLIM1-205ENST00000493949 GOLGA6L19H0YKK7 550 aa12.14□□□□□ -0.47
PDLIM1-205ENST00000493949 CCP110O43303 1012 aa12.14□□□□□ -0.47
PDLIM1-205ENST00000493949 ASGR1P07306 291 aa12.14□□□□□ -0.47
PDLIM1-205ENST00000493949 CA3P07451 260 aa12.14□□□□□ -0.47
PDLIM1-205ENST00000493949 ATP2A2P16615 1042 aaKnown RBP12.14□□□□□ -0.47
PDLIM1-205ENST00000493949 NKX3-2P78367 333 aa12.14□□□□□ -0.47
PDLIM1-205ENST00000493949 ME3Q16798 604 aa12.14□□□□□ -0.47
PDLIM1-205ENST00000493949 CERKLQ49MI3 558 aaPredicted RBP12.14□□□□□ -0.47
PDLIM1-205ENST00000493949 TMEM67Q5HYA8 995 aa12.14□□□□□ -0.47
PDLIM1-205ENST00000493949 KRT40Q6A162 431 aa12.14□□□□□ -0.47
PDLIM1-205ENST00000493949 POTEBQ6S5H4 581 aa12.14□□□□□ -0.47
PDLIM1-205ENST00000493949 CHAMP1Q96JM3 812 aa12.14□□□□□ -0.47
PDLIM1-205ENST00000493949 NAT10Q9H0A0 1025 aaKnown RBP12.14□□□□□ -0.47
PDLIM1-205ENST00000493949 UPF3AQ9H1J1 476 aaKnown RBP12.14□□□□□ -0.47
PDLIM1-205ENST00000493949 CBX8Q9HC52 389 aa12.14□□□□□ -0.47
PDLIM1-205ENST00000493949 LRP2BPQ9P2M1 347 aa12.14□□□□□ -0.47
PDLIM1-205ENST00000493949 SERPINB13Q9UIV8 391 aa12.14□□□□□ -0.47
PDLIM1-205ENST00000493949 FAM184BQ9ULE4 1060 aa12.14□□□□□ -0.47
PDLIM1-205ENST00000493949 PYCARDQ9ULZ3 195 aa12.14□□□□□ -0.47
PDLIM1-205ENST00000493949 UMODL1Q5DID0 1318 aa12.13□□□□□ -0.47
PDLIM1-205ENST00000493949 PTPRSQ13332 1948 aa12.13□□□□□ -0.47
PDLIM1-205ENST00000493949 A0A1W2PRG0 241 aa12.13□□□□□ -0.47
PDLIM1-205ENST00000493949 SLC27A2O14975 620 aa12.13□□□□□ -0.47
PDLIM1-205ENST00000493949 LPXNO60711 386 aa12.13□□□□□ -0.47
PDLIM1-205ENST00000493949 ZNF165P49910 485 aa12.13□□□□□ -0.47
PDLIM1-205ENST00000493949 GJA9P57773 515 aa12.13□□□□□ -0.47
PDLIM1-205ENST00000493949 ZSCAN25Q6NSZ9 544 aa12.13□□□□□ -0.47
PDLIM1-205ENST00000493949 RPUSD2Q8IZ73 545 aaKnown RBP12.13□□□□□ -0.47
PDLIM1-205ENST00000493949 LEO1Q8WVC0 666 aaPredicted RBP12.13□□□□□ -0.47
PDLIM1-205ENST00000493949 UIMC1Q96RL1 719 aa12.13□□□□□ -0.47
PDLIM1-205ENST00000493949 MMP19Q99542 508 aa12.13□□□□□ -0.47
PDLIM1-205ENST00000493949 TANGO6Q9C0B7 1094 aa12.13□□□□□ -0.47
PDLIM1-205ENST00000493949 HIPK3Q9H422 1215 aa12.13□□□□□ -0.47
PDLIM1-205ENST00000493949 CABP5Q9NP86 173 aa12.13□□□□□ -0.47
PDLIM1-205ENST00000493949 LMCD1Q9NZU5 365 aa12.13□□□□□ -0.47
PDLIM1-205ENST00000493949 ADAMTS5Q9UNA0 930 aa12.13□□□□□ -0.47
PDLIM1-205ENST00000493949 NAV1Q8NEY1 1877 aa12.12□□□□□ -0.47
PDLIM1-205ENST00000493949 ZFHX2Q9C0A1 2572 aaPredicted RBP12.12□□□□□ -0.47
PDLIM1-205ENST00000493949 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.12□□□□□ -0.47
PDLIM1-205ENST00000493949 LARGE1O95461 756 aa12.12□□□□□ -0.47
PDLIM1-205ENST00000493949 PGK2P07205 417 aa12.12□□□□□ -0.47
PDLIM1-205ENST00000493949 NCBP1Q09161 790 aaKnown RBP12.12□□□□□ -0.47
PDLIM1-205ENST00000493949 PLS1Q14651 629 aa12.12□□□□□ -0.47
PDLIM1-205ENST00000493949 KCTD2Q14681 263 aa12.12□□□□□ -0.47
PDLIM1-205ENST00000493949 ANO6Q4KMQ2 910 aa12.12□□□□□ -0.47
PDLIM1-205ENST00000493949 GORABQ5T7V8 394 aa12.12□□□□□ -0.47
PDLIM1-205ENST00000493949 MAMDC4Q6UXC1 1216 aa12.12□□□□□ -0.47
PDLIM1-205ENST00000493949 RIOX2Q8IUF8 465 aa12.12□□□□□ -0.47
PDLIM1-205ENST00000493949 ZNF397Q8NF99 534 aaPredicted RBP12.12□□□□□ -0.47
PDLIM1-205ENST00000493949 GTF3C6Q969F1 213 aa12.12□□□□□ -0.47
PDLIM1-205ENST00000493949 ATG4CQ96DT6 458 aa12.12□□□□□ -0.47
PDLIM1-205ENST00000493949 BPIFA3Q9BQP9 254 aa12.12□□□□□ -0.47
PDLIM1-205ENST00000493949 NOC4LQ9BVI4 516 aaKnown RBP12.12□□□□□ -0.47
PDLIM1-205ENST00000493949 SEZ6LQ9BYH1 1024 aa12.12□□□□□ -0.47
PDLIM1-205ENST00000493949 TRIM5Q9C035 493 aa12.12□□□□□ -0.47
PDLIM1-205ENST00000493949 WNT8AQ9H1J5 351 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms