RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 RILPL1Q5EBL4 403 aa17.01■□□□□ 0.31
ACTB-213ENST00000493945 MORN1Q5T089 497 aa17.01■□□□□ 0.31
ACTB-213ENST00000493945 FAM133AQ8N9E0 248 aa17.01■□□□□ 0.31
ACTB-213ENST00000493945 RAET1EQ8TD07 263 aa17.01■□□□□ 0.31
ACTB-213ENST00000493945 R3HDMLQ9H3Y0 253 aa17.01■□□□□ 0.31
ACTB-213ENST00000493945 DNAJC25-GNG10A0A024R161 153 aa17■□□□□ 0.31
ACTB-213ENST00000493945 BTBD18B2RXH4 712 aa17■□□□□ 0.31
ACTB-213ENST00000493945 ZSCAN22P10073 491 aaPredicted RBP17■□□□□ 0.31
ACTB-213ENST00000493945 U2AF2P26368 475 aaKnown RBP eCLIP17■□□□□ 0.31
ACTB-213ENST00000493945 ZNF76P36508 570 aa17■□□□□ 0.31
ACTB-213ENST00000493945 SREBF1P36956 1147 aa17■□□□□ 0.31
ACTB-213ENST00000493945 ALDH5A1P51649 535 aaPredicted RBP17■□□□□ 0.31
ACTB-213ENST00000493945 ORC2Q13416 577 aaPredicted RBP17■□□□□ 0.31
ACTB-213ENST00000493945 IRF5Q13568 498 aa17■□□□□ 0.31
ACTB-213ENST00000493945 PIK3AP1Q6ZUJ8 805 aa17■□□□□ 0.31
ACTB-213ENST00000493945 NEK8Q86SG6 692 aa17■□□□□ 0.31
ACTB-213ENST00000493945 DOCK3Q8IZD9 2030 aa17■□□□□ 0.31
ACTB-213ENST00000493945 TRIM47Q96LD4 638 aa17■□□□□ 0.31
ACTB-213ENST00000493945 PXMP2Q9NR77 195 aa17■□□□□ 0.31
ACTB-213ENST00000493945 CHMP5Q9NZZ3 219 aa17■□□□□ 0.31
ACTB-213ENST00000493945 SRRDQ9UH36 339 aa17■□□□□ 0.31
ACTB-213ENST00000493945 FRMPD4Q14CM0 1322 aa16.99■□□□□ 0.31
ACTB-213ENST00000493945 SYNGAP1Q96PV0 1343 aa16.99■□□□□ 0.31
ACTB-213ENST00000493945 BMP15O95972 392 aa16.99■□□□□ 0.31
ACTB-213ENST00000493945 PGK2P07205 417 aa16.99■□□□□ 0.31
ACTB-213ENST00000493945 EIF2AK2P19525 551 aaKnown RBP16.99■□□□□ 0.31
ACTB-213ENST00000493945 USP11P51784 963 aa16.99■□□□□ 0.31
ACTB-213ENST00000493945 SETQ01105 290 aaPredicted RBP16.99■□□□□ 0.31
ACTB-213ENST00000493945 STXBP2Q15833 593 aa16.99■□□□□ 0.31
ACTB-213ENST00000493945 ZNF792Q3KQV3 632 aa16.99■□□□□ 0.31
ACTB-213ENST00000493945 MFSD14CQ5VZR4 134 aa16.99■□□□□ 0.31
ACTB-213ENST00000493945 PCNX4Q63HM2 1172 aa16.99■□□□□ 0.31
ACTB-213ENST00000493945 OLFML2BQ68BL8 750 aa16.99■□□□□ 0.31
ACTB-213ENST00000493945 NLRX1Q86UT6 975 aa16.99■□□□□ 0.31
ACTB-213ENST00000493945 CDHR1Q96JP9 859 aa16.99■□□□□ 0.31
ACTB-213ENST00000493945 GJB4Q9NTQ9 266 aa16.99■□□□□ 0.31
ACTB-213ENST00000493945 TCEAL9Q9UHQ7 104 aa16.99■□□□□ 0.31
ACTB-213ENST00000493945 TSKSQ9UJT2 592 aa16.99■□□□□ 0.31
ACTB-213ENST00000493945 CEP131Q9UPN4 1083 aa16.99■□□□□ 0.31
ACTB-213ENST00000493945 MTMR6Q9Y217 621 aa16.99■□□□□ 0.31
ACTB-213ENST00000493945 CNPY2Q9Y2B0 182 aa16.99■□□□□ 0.31
ACTB-213ENST00000493945 TRIM17Q9Y577 477 aa16.99■□□□□ 0.31
ACTB-213ENST00000493945 MYH7BA7E2Y1 1941 aa16.98■□□□□ 0.31
ACTB-213ENST00000493945 DTNBO60941 627 aa16.98■□□□□ 0.31
ACTB-213ENST00000493945 ECM2O94769 699 aaPredicted RBP16.98■□□□□ 0.31
ACTB-213ENST00000493945 ARHGAP4P98171 946 aa16.98■□□□□ 0.31
ACTB-213ENST00000493945 NR5A1Q13285 461 aa16.98■□□□□ 0.31
ACTB-213ENST00000493945 KCNV1Q6PIU1 500 aa16.98■□□□□ 0.31
ACTB-213ENST00000493945 MOXD1Q6UVY6 613 aa16.98■□□□□ 0.31
ACTB-213ENST00000493945 RASGRP4Q8TDF6 673 aa16.98■□□□□ 0.31
ACTB-213ENST00000493945 TBCKQ8TEA7 893 aa16.98■□□□□ 0.31
ACTB-213ENST00000493945 ZNF396Q96N95 335 aaPredicted RBP16.98■□□□□ 0.31
ACTB-213ENST00000493945 PDCD2LQ9BRP1 358 aa16.98■□□□□ 0.31
ACTB-213ENST00000493945 NRBP1Q9UHY1 535 aa16.98■□□□□ 0.31
ACTB-213ENST00000493945 LCTP09848 1927 aa16.98■□□□□ 0.31
ACTB-213ENST00000493945 RPTORQ8N122 1335 aa16.97■□□□□ 0.31
ACTB-213ENST00000493945 M0R2N6 131 aa16.97■□□□□ 0.31
ACTB-213ENST00000493945 F13A1P00488 732 aa16.97■□□□□ 0.31
ACTB-213ENST00000493945 NR3C2P08235 984 aa16.97■□□□□ 0.31
ACTB-213ENST00000493945 HSPA8P11142 646 aaKnown RBP16.97■□□□□ 0.31
ACTB-213ENST00000493945 CYP2B6P20813 491 aa16.97■□□□□ 0.31
ACTB-213ENST00000493945 FLT3LGP49771 235 aa16.97■□□□□ 0.31
ACTB-213ENST00000493945 PRKCZQ05513 592 aa16.97■□□□□ 0.31
ACTB-213ENST00000493945 PGM5Q15124 567 aa16.97■□□□□ 0.31
ACTB-213ENST00000493945 NPY5RQ15761 445 aa16.97■□□□□ 0.31
ACTB-213ENST00000493945 PKN2Q16513 984 aaKnown RBP16.97■□□□□ 0.31
ACTB-213ENST00000493945 ATL3Q6DD88 541 aa16.97■□□□□ 0.31
ACTB-213ENST00000493945 SLAIN1Q8ND83 568 aa16.97■□□□□ 0.31
ACTB-213ENST00000493945 TBC1D5Q92609 795 aa16.97■□□□□ 0.31
ACTB-213ENST00000493945 MAML3Q96JK9 1138 aa16.97■□□□□ 0.31
ACTB-213ENST00000493945 TAAR1Q96RJ0 339 aa16.97■□□□□ 0.31
ACTB-213ENST00000493945 ARHGAP39Q9C0H5 1083 aa16.97■□□□□ 0.31
ACTB-213ENST00000493945 TMEM260Q9NX78 707 aa16.97■□□□□ 0.31
ACTB-213ENST00000493945 MYH15Q9Y2K3 1946 aa16.97■□□□□ 0.31
ACTB-213ENST00000493945 FOXN1O15353 648 aa16.96■□□□□ 0.31
ACTB-213ENST00000493945 MAFGO15525 162 aa16.96■□□□□ 0.31
ACTB-213ENST00000493945 EIF3JO75822 258 aaKnown RBP16.96■□□□□ 0.31
ACTB-213ENST00000493945 BRD1O95696 1058 aa16.96■□□□□ 0.31
ACTB-213ENST00000493945 CYP3A4P08684 503 aa16.96■□□□□ 0.31
ACTB-213ENST00000493945 MYCLP12524 364 aaPredicted RBP16.96■□□□□ 0.31
ACTB-213ENST00000493945 CNTN2Q02246 1040 aa16.96■□□□□ 0.31
ACTB-213ENST00000493945 INF2Q27J81 1249 aa16.96■□□□□ 0.31
ACTB-213ENST00000493945 MAMDC4Q6UXC1 1216 aa16.96■□□□□ 0.31
ACTB-213ENST00000493945 ARMCX2Q7L311 632 aa16.96■□□□□ 0.31
ACTB-213ENST00000493945 CTU1Q7Z7A3 348 aaKnown RBP16.96■□□□□ 0.31
ACTB-213ENST00000493945 FERMT3Q86UX7 667 aa16.96■□□□□ 0.31
ACTB-213ENST00000493945 OXER1Q8TDS5 423 aa16.96■□□□□ 0.31
ACTB-213ENST00000493945 PXYLP1Q8TE99 480 aa16.96■□□□□ 0.31
ACTB-213ENST00000493945 USP6NLQ92738 828 aa16.96■□□□□ 0.31
ACTB-213ENST00000493945 TINF2Q9BSI4 451 aa16.96■□□□□ 0.31
ACTB-213ENST00000493945 VTA1Q9NP79 307 aa16.96■□□□□ 0.31
ACTB-213ENST00000493945 COL20A1Q9P218 1284 aa16.96■□□□□ 0.31
ACTB-213ENST00000493945 MARCH6O60337 910 aa16.95■□□□□ 0.3
ACTB-213ENST00000493945 COBLO75128 1261 aa16.95■□□□□ 0.3
ACTB-213ENST00000493945 HMGCRP04035 888 aa16.95■□□□□ 0.3
ACTB-213ENST00000493945 LETM2Q2VYF4 491 aa16.95■□□□□ 0.3
ACTB-213ENST00000493945 MYSM1Q5VVJ2 828 aa16.95■□□□□ 0.3
ACTB-213ENST00000493945 NIPA1Q7RTP0 329 aa16.95■□□□□ 0.3
ACTB-213ENST00000493945 TNFRSF25Q93038 417 aa16.95■□□□□ 0.3
ACTB-213ENST00000493945 SHISA4Q96DD7 197 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms