RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 SYN1P17600 705 aa26.18■■□□□ 1.78
SNIP1-203ENST00000493916 TRIM60Q495X7 471 aa26.18■■□□□ 1.78
SNIP1-203ENST00000493916 HABP4Q5JVS0 413 aaKnown RBP26.18■■□□□ 1.78
SNIP1-203ENST00000493916 RAB11FIP4Q86YS3 637 aa26.18■■□□□ 1.78
SNIP1-203ENST00000493916 SCFD2Q8WU76 684 aa26.18■■□□□ 1.78
SNIP1-203ENST00000493916 PXMP2Q9NR77 195 aa26.18■■□□□ 1.78
SNIP1-203ENST00000493916 BRPF3Q9ULD4 1205 aa26.18■■□□□ 1.78
SNIP1-203ENST00000493916 ELP1O95163 1332 aa26.17■■□□□ 1.78
SNIP1-203ENST00000493916 DYNC1LI2O43237 492 aaPredicted RBP26.17■■□□□ 1.78
SNIP1-203ENST00000493916 RCAN1P53805 252 aa26.17■■□□□ 1.78
SNIP1-203ENST00000493916 FSCN1Q16658 493 aaKnown RBP26.17■■□□□ 1.78
SNIP1-203ENST00000493916 TMEM63BQ5T3F8 832 aa26.17■■□□□ 1.78
SNIP1-203ENST00000493916 ARHGEF16Q5VV41 709 aa26.17■■□□□ 1.78
SNIP1-203ENST00000493916 BLOC1S2Q6QNY1 142 aa26.17■■□□□ 1.78
SNIP1-203ENST00000493916 PIBF1Q8WXW3 757 aa26.17■■□□□ 1.78
SNIP1-203ENST00000493916 GLT1D1Q96MS3 346 aa26.17■■□□□ 1.78
SNIP1-203ENST00000493916 STARD7Q9NQZ5 370 aa26.17■■□□□ 1.78
SNIP1-203ENST00000493916 RBM28Q9NW13 759 aaKnown RBP26.17■■□□□ 1.78
SNIP1-203ENST00000493916 BAZ2BQ9UIF8 2168 aaKnown RBP26.16■■□□□ 1.78
SNIP1-203ENST00000493916 GCOM1H8Y6P7 765 aaPredicted RBP26.16■■□□□ 1.78
SNIP1-203ENST00000493916 NKRFO15226 690 aaKnown RBP eCLIP26.16■■□□□ 1.78
SNIP1-203ENST00000493916 ZBTB43O43298 467 aa26.16■■□□□ 1.78
SNIP1-203ENST00000493916 POLR2MP0CAP2 368 aa26.16■■□□□ 1.78
SNIP1-203ENST00000493916 PTGS1P23219 599 aa26.16■■□□□ 1.78
SNIP1-203ENST00000493916 PPP2R5BQ15173 497 aa26.16■■□□□ 1.78
SNIP1-203ENST00000493916 STXBP2Q15833 593 aa26.16■■□□□ 1.78
SNIP1-203ENST00000493916 CMTR1Q8N1G2 835 aaKnown RBP26.16■■□□□ 1.78
SNIP1-203ENST00000493916 FBXL16Q8N461 479 aa26.16■■□□□ 1.78
SNIP1-203ENST00000493916 GDF15Q99988 308 aa26.16■■□□□ 1.78
SNIP1-203ENST00000493916 USP26Q9BXU7 913 aa26.16■■□□□ 1.78
SNIP1-203ENST00000493916 KLF18A0A0U1RQI7 1052 aa26.15■■□□□ 1.78
SNIP1-203ENST00000493916 CPA1P15085 419 aa26.15■■□□□ 1.78
SNIP1-203ENST00000493916 EIF2AK2P19525 551 aaKnown RBP26.15■■□□□ 1.78
SNIP1-203ENST00000493916 PSMA5P28066 241 aa26.15■■□□□ 1.78
SNIP1-203ENST00000493916 HOXA13P31271 388 aaPredicted RBP26.15■■□□□ 1.78
SNIP1-203ENST00000493916 BEX3Q00994 111 aa26.15■■□□□ 1.78
SNIP1-203ENST00000493916 RBM27Q9P2N5 1060 aaKnown RBP26.15■■□□□ 1.78
SNIP1-203ENST00000493916 ZEB2O60315 1214 aa26.14■■□□□ 1.78
SNIP1-203ENST00000493916 RPS6KB1P23443 525 aa26.14■■□□□ 1.78
SNIP1-203ENST00000493916 FGD1P98174 961 aa26.14■■□□□ 1.78
SNIP1-203ENST00000493916 RTN1Q16799 776 aa26.14■■□□□ 1.78
SNIP1-203ENST00000493916 PDCD2LQ9BRP1 358 aa26.14■■□□□ 1.78
SNIP1-203ENST00000493916 EIF3JO75822 258 aaKnown RBP26.13■■□□□ 1.77
SNIP1-203ENST00000493916 CABYRO75952 493 aa26.13■■□□□ 1.77
SNIP1-203ENST00000493916 NR3C2P08235 984 aa26.13■■□□□ 1.77
SNIP1-203ENST00000493916 BMP8BP34820 402 aa26.13■■□□□ 1.77
SNIP1-203ENST00000493916 MAGEA10P43363 369 aaPredicted RBP26.13■■□□□ 1.77
SNIP1-203ENST00000493916 TLE2Q04725 743 aa26.13■■□□□ 1.77
SNIP1-203ENST00000493916 TTLL4Q14679 1199 aa26.13■■□□□ 1.77
SNIP1-203ENST00000493916 Q6ZUG5 572 aa26.13■■□□□ 1.77
SNIP1-203ENST00000493916 ANKRD33Q7Z3H0 272 aa26.13■■□□□ 1.77
SNIP1-203ENST00000493916 AGXT2Q9BYV1 514 aa26.13■■□□□ 1.77
SNIP1-203ENST00000493916 PRKAG2Q9UGJ0 569 aa26.13■■□□□ 1.77
SNIP1-203ENST00000493916 FRMPD4Q14CM0 1322 aa26.13■■□□□ 1.77
SNIP1-203ENST00000493916 CNTNAP5Q8WYK1 1306 aa26.13■■□□□ 1.77
SNIP1-203ENST00000493916 NID2Q14112 1375 aa26.12■■□□□ 1.77
SNIP1-203ENST00000493916 A0A0U1RQG5 324 aaPredicted RBP26.12■■□□□ 1.77
SNIP1-203ENST00000493916 A0A1W2PPC1 479 aa26.12■■□□□ 1.77
SNIP1-203ENST00000493916 GOLGA8AA7E2F4 631 aa26.12■■□□□ 1.77
SNIP1-203ENST00000493916 GOLGA8BA8MQT2 603 aa26.12■■□□□ 1.77
SNIP1-203ENST00000493916 TXNP10599 105 aaKnown RBP26.12■■□□□ 1.77
SNIP1-203ENST00000493916 CASTP20810 708 aaKnown RBP26.12■■□□□ 1.77
SNIP1-203ENST00000493916 CCDC62Q6P9F0 684 aa26.12■■□□□ 1.77
SNIP1-203ENST00000493916 OR6J1Q8NGC5 347 aa26.12■■□□□ 1.77
SNIP1-203ENST00000493916 TOX2Q96NM4 488 aa26.12■■□□□ 1.77
SNIP1-203ENST00000493916 PDLIM7Q9NR12 457 aa26.12■■□□□ 1.77
SNIP1-203ENST00000493916 LTBP2Q14767 1821 aa26.11■■□□□ 1.77
SNIP1-203ENST00000493916 PIK3CDO00329 1044 aa26.11■■□□□ 1.77
SNIP1-203ENST00000493916 ARIH2O95376 493 aa26.11■■□□□ 1.77
SNIP1-203ENST00000493916 CPT1AP50416 773 aa26.11■■□□□ 1.77
SNIP1-203ENST00000493916 FUT2Q10981 343 aa26.11■■□□□ 1.77
SNIP1-203ENST00000493916 PGM5Q15124 567 aa26.11■■□□□ 1.77
SNIP1-203ENST00000493916 CCDC82Q8N4S0 544 aa26.11■■□□□ 1.77
SNIP1-203ENST00000493916 MROH7Q68CQ1 1323 aa26.11■■□□□ 1.77
SNIP1-203ENST00000493916 PQBP1O60828 265 aaKnown RBP26.1■■□□□ 1.77
SNIP1-203ENST00000493916 CDK7P50613 346 aa26.1■■□□□ 1.77
SNIP1-203ENST00000493916 CXCL17Q6UXB2 119 aa26.1■■□□□ 1.77
SNIP1-203ENST00000493916 SEPT14Q6ZU15 432 aa26.1■■□□□ 1.77
SNIP1-203ENST00000493916 VSIG10LQ86VR7 867 aa26.1■■□□□ 1.77
SNIP1-203ENST00000493916 FCHSD1Q86WN1 690 aa26.1■■□□□ 1.77
SNIP1-203ENST00000493916 BRF1Q92994 677 aa26.1■■□□□ 1.77
SNIP1-203ENST00000493916 FAM217BQ9NTX9 383 aaPredicted RBP26.1■■□□□ 1.77
SNIP1-203ENST00000493916 KIAA1217Q5T5P2 1943 aa26.1■■□□□ 1.77
SNIP1-203ENST00000493916 ARVCFO00192 962 aa26.09■■□□□ 1.77
SNIP1-203ENST00000493916 CLTBP09497 229 aa26.09■■□□□ 1.77
SNIP1-203ENST00000493916 APOBRQ0VD83 1088 aa26.09■■□□□ 1.77
SNIP1-203ENST00000493916 IL31RAQ8NI17 732 aa26.09■■□□□ 1.77
SNIP1-203ENST00000493916 CUL5Q93034 780 aa26.09■■□□□ 1.77
SNIP1-203ENST00000493916 VTI1AQ96AJ9 217 aa26.09■■□□□ 1.77
SNIP1-203ENST00000493916 ZSWIM6Q9HCJ5 1215 aa26.09■■□□□ 1.77
SNIP1-203ENST00000493916 PRDM5Q9NQX1 630 aaPredicted RBP26.09■■□□□ 1.77
SNIP1-203ENST00000493916 hCG_1642624A0A1W2PR95 340 aa26.08■■□□□ 1.77
SNIP1-203ENST00000493916 MEIS2O14770 477 aa26.08■■□□□ 1.77
SNIP1-203ENST00000493916 CCND2P30279 289 aa26.08■■□□□ 1.77
SNIP1-203ENST00000493916 METAP2P50579 478 aaKnown RBP eCLIP26.08■■□□□ 1.77
SNIP1-203ENST00000493916 BRDTQ58F21 947 aaPredicted RBP26.08■■□□□ 1.77
SNIP1-203ENST00000493916 RUFY3Q7L099 469 aa26.08■■□□□ 1.77
SNIP1-203ENST00000493916 SLC43A3Q8NBI5 491 aa26.08■■□□□ 1.77
SNIP1-203ENST00000493916 COPS5Q92905 334 aa26.08■■□□□ 1.77
SNIP1-203ENST00000493916 SEZ6LQ9BYH1 1024 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms