RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 PNMA6FA0A0J9YX94 578 aa12.04□□□□□ -0.48
TRAPPC12-222ENST00000493792 hCG_1642624A0A1W2PR95 340 aa12.04□□□□□ -0.48
TRAPPC12-222ENST00000493792 CYTH3O43739 400 aa12.04□□□□□ -0.48
TRAPPC12-222ENST00000493792 PPP1R11O60927 126 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC12-222ENST00000493792 RARBP10826 455 aa12.04□□□□□ -0.48
TRAPPC12-222ENST00000493792 RTN1Q16799 776 aa12.04□□□□□ -0.48
TRAPPC12-222ENST00000493792 SLC35G1Q2M3R5 365 aa12.04□□□□□ -0.48
TRAPPC12-222ENST00000493792 NOL8Q76FK4 1167 aaKnown RBP12.04□□□□□ -0.48
TRAPPC12-222ENST00000493792 SRBD1Q8N5C6 995 aaKnown RBP12.04□□□□□ -0.48
TRAPPC12-222ENST00000493792 TBC1D5Q92609 795 aa12.04□□□□□ -0.48
TRAPPC12-222ENST00000493792 FGD4Q96M96 766 aa12.04□□□□□ -0.48
TRAPPC12-222ENST00000493792 MPHOSPH6Q99547 160 aaKnown RBP12.04□□□□□ -0.48
TRAPPC12-222ENST00000493792 SPZ1Q9BXG8 430 aa12.04□□□□□ -0.48
TRAPPC12-222ENST00000493792 UPF3BQ9BZI7 483 aaKnown RBP12.04□□□□□ -0.48
TRAPPC12-222ENST00000493792 RBM28Q9NW13 759 aaKnown RBP12.04□□□□□ -0.48
TRAPPC12-222ENST00000493792 FAM184BQ9ULE4 1060 aa12.04□□□□□ -0.48
TRAPPC12-222ENST00000493792 SNAI1O95863 264 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC12-222ENST00000493792 AKR1A1P14550 325 aa12.03□□□□□ -0.48
TRAPPC12-222ENST00000493792 METAP2P50579 478 aaKnown RBP eCLIP12.03□□□□□ -0.48
TRAPPC12-222ENST00000493792 ALDH5A1P51649 535 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC12-222ENST00000493792 ACVR2BQ13705 512 aa12.03□□□□□ -0.48
TRAPPC12-222ENST00000493792 LRRC41Q15345 812 aa12.03□□□□□ -0.48
TRAPPC12-222ENST00000493792 MAMDC4Q6UXC1 1216 aa12.03□□□□□ -0.48
TRAPPC12-222ENST00000493792 TMTC3Q6ZXV5 915 aa12.03□□□□□ -0.48
TRAPPC12-222ENST00000493792 RUFY3Q7L099 469 aa12.03□□□□□ -0.48
TRAPPC12-222ENST00000493792 FERMT2Q96AC1 680 aa12.03□□□□□ -0.48
TRAPPC12-222ENST00000493792 MTMR8Q96EF0 704 aa12.03□□□□□ -0.48
TRAPPC12-222ENST00000493792 ABHD16BQ9H3Z7 469 aa12.03□□□□□ -0.48
TRAPPC12-222ENST00000493792 XPNPEP3Q9NQH7 507 aa12.03□□□□□ -0.48
TRAPPC12-222ENST00000493792 PDRG1Q9NUG6 133 aa12.03□□□□□ -0.48
TRAPPC12-222ENST00000493792 BAZ2BQ9UIF8 2168 aaKnown RBP12.03□□□□□ -0.48
TRAPPC12-222ENST00000493792 MCM3APO60318 1980 aa12.03□□□□□ -0.48
TRAPPC12-222ENST00000493792 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC12-222ENST00000493792 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC12-222ENST00000493792 B4DLN1 442 aa12.02□□□□□ -0.49
TRAPPC12-222ENST00000493792 KBTBD13C9JR72 458 aa12.02□□□□□ -0.49
TRAPPC12-222ENST00000493792 KIAA0355O15063 1070 aa12.02□□□□□ -0.49
TRAPPC12-222ENST00000493792 ZNF865P0CJ78 1059 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC12-222ENST00000493792 MRPL12P52815 198 aaKnown RBP12.02□□□□□ -0.49
TRAPPC12-222ENST00000493792 PDE4DQ08499 809 aa12.02□□□□□ -0.49
TRAPPC12-222ENST00000493792 FBXO16Q8IX29 292 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC12-222ENST00000493792 LENG1Q96BZ8 264 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC12-222ENST00000493792 RNPC3Q96LT9 517 aaKnown RBP12.02□□□□□ -0.49
TRAPPC12-222ENST00000493792 LARP6Q9BRS8 491 aaKnown RBP12.02□□□□□ -0.49
TRAPPC12-222ENST00000493792 ZNF576Q9H609 170 aa12.02□□□□□ -0.49
TRAPPC12-222ENST00000493792 ASTN1O14525 1302 aa12.02□□□□□ -0.49
TRAPPC12-222ENST00000493792 CCDC196A0A1B0GTZ2 297 aa12.01□□□□□ -0.49
TRAPPC12-222ENST00000493792 GCOM1H8Y6P7 765 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC12-222ENST00000493792 SEC24BO95487 1268 aa12.01□□□□□ -0.49
TRAPPC12-222ENST00000493792 PGK1P00558 417 aa12.01□□□□□ -0.49
TRAPPC12-222ENST00000493792 POLR2MP0CAP2 368 aa12.01□□□□□ -0.49
TRAPPC12-222ENST00000493792 EIF2AK2P19525 551 aaKnown RBP12.01□□□□□ -0.49
TRAPPC12-222ENST00000493792 DNAJB2P25686 324 aa12.01□□□□□ -0.49
TRAPPC12-222ENST00000493792 SMARCA1P28370 1054 aa12.01□□□□□ -0.49
TRAPPC12-222ENST00000493792 HOXA13P31271 388 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC12-222ENST00000493792 PLA2G5P39877 138 aa12.01□□□□□ -0.49
TRAPPC12-222ENST00000493792 CCDC144BQ3MJ40 725 aa12.01□□□□□ -0.49
TRAPPC12-222ENST00000493792 ARHGEF16Q5VV41 709 aa12.01□□□□□ -0.49
TRAPPC12-222ENST00000493792 HEATR3Q7Z4Q2 680 aa12.01□□□□□ -0.49
TRAPPC12-222ENST00000493792 FCHSD1Q86WN1 690 aa12.01□□□□□ -0.49
TRAPPC12-222ENST00000493792 PIAS4Q8N2W9 510 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC12-222ENST00000493792 RGS22Q8NE09 1264 aa12.01□□□□□ -0.49
TRAPPC12-222ENST00000493792 DNERQ8NFT8 737 aa12.01□□□□□ -0.49
TRAPPC12-222ENST00000493792 SYTL5Q8TDW5 730 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC12-222ENST00000493792 ATXN2LQ8WWM7 1075 aaKnown RBP12.01□□□□□ -0.49
TRAPPC12-222ENST00000493792 ASB2Q96Q27 587 aa12.01□□□□□ -0.49
TRAPPC12-222ENST00000493792 TAAR1Q96RJ0 339 aa12.01□□□□□ -0.49
TRAPPC12-222ENST00000493792 RMDN3Q96TC7 470 aa12.01□□□□□ -0.49
TRAPPC12-222ENST00000493792 TM6SF1Q9BZW5 370 aa12.01□□□□□ -0.49
TRAPPC12-222ENST00000493792 ZSWIM6Q9HCJ5 1215 aa12.01□□□□□ -0.49
TRAPPC12-222ENST00000493792 PHF24Q9UPV7 400 aa12.01□□□□□ -0.49
TRAPPC12-222ENST00000493792 GTF3C3Q9Y5Q9 886 aa12.01□□□□□ -0.49
TRAPPC12-222ENST00000493792 LTBP2Q14767 1821 aa12.01□□□□□ -0.49
TRAPPC12-222ENST00000493792 FRMPD3Q5JV73 1810 aa12.01□□□□□ -0.49
TRAPPC12-222ENST00000493792 LCTP09848 1927 aa12□□□□□ -0.49
TRAPPC12-222ENST00000493792 CLTBP09497 229 aa12□□□□□ -0.49
TRAPPC12-222ENST00000493792 CDC27P30260 824 aa12□□□□□ -0.49
TRAPPC12-222ENST00000493792 CCT2P78371 535 aaKnown RBP12□□□□□ -0.49
TRAPPC12-222ENST00000493792 TNFAIP2Q03169 654 aa12□□□□□ -0.49
TRAPPC12-222ENST00000493792 C16orf59Q7L2K0 433 aa12□□□□□ -0.49
TRAPPC12-222ENST00000493792 RNF180Q86T96 592 aa12□□□□□ -0.49
TRAPPC12-222ENST00000493792 SMARCC2Q8TAQ2 1214 aa12□□□□□ -0.49
TRAPPC12-222ENST00000493792 NSUN6Q8TEA1 469 aaKnown RBP12□□□□□ -0.49
TRAPPC12-222ENST00000493792 GPKOWQ92917 476 aaPredicted RBP eCLIP12□□□□□ -0.49
TRAPPC12-222ENST00000493792 CUL5Q93034 780 aa12□□□□□ -0.49
TRAPPC12-222ENST00000493792 SPC25Q9HBM1 224 aa12□□□□□ -0.49
TRAPPC12-222ENST00000493792 COL20A1Q9P218 1284 aa12□□□□□ -0.49
TRAPPC12-222ENST00000493792 V9GY48 417 aaPredicted RBP12□□□□□ -0.49
TRAPPC12-222ENST00000493792 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC12-222ENST00000493792 OPLAHO14841 1288 aa11.99□□□□□ -0.49
TRAPPC12-222ENST00000493792 C6orf222P0C671 652 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC12-222ENST00000493792 MYCLP12524 364 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC12-222ENST00000493792 HOXD11P31277 338 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC12-222ENST00000493792 ADD1P35611 737 aaKnown RBP11.99□□□□□ -0.49
TRAPPC12-222ENST00000493792 RCAN1P53805 252 aa11.99□□□□□ -0.49
TRAPPC12-222ENST00000493792 ANAPC15P60006 121 aa11.99□□□□□ -0.49
TRAPPC12-222ENST00000493792 AKAP17AQ02040 695 aaKnown RBP11.99□□□□□ -0.49
TRAPPC12-222ENST00000493792 FAAP100Q0VG06 881 aa11.99□□□□□ -0.49
TRAPPC12-222ENST00000493792 STK3Q13188 491 aa11.99□□□□□ -0.49
TRAPPC12-222ENST00000493792 ADGRE1Q14246 886 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms