RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 ZBTB38Q8NAP3 1195 aaPredicted RBP6.67□□□□□ -1.34
ITGB1-216ENST00000493758 OSBPL2Q9H1P3 480 aa6.67□□□□□ -1.34
ITGB1-216ENST00000493758 GULP1Q9UBP9 304 aa6.67□□□□□ -1.34
ITGB1-216ENST00000493758 PPP1R1BQ9UD71 204 aaPredicted RBP6.67□□□□□ -1.34
ITGB1-216ENST00000493758 TMEFF2Q9UIK5 374 aaPredicted RBP6.67□□□□□ -1.34
ITGB1-216ENST00000493758 X6R8D5 127 aa6.67□□□□□ -1.34
ITGB1-216ENST00000493758 IRS2Q9Y4H2 1338 aa6.67□□□□□ -1.34
ITGB1-216ENST00000493758 NUDT19A8MXV4 375 aa6.66□□□□□ -1.34
ITGB1-216ENST00000493758 ETV2O00321 342 aaPredicted RBP6.66□□□□□ -1.34
ITGB1-216ENST00000493758 NFIBO00712 420 aa6.66□□□□□ -1.34
ITGB1-216ENST00000493758 IRS4O14654 1257 aaPredicted RBP6.66□□□□□ -1.34
ITGB1-216ENST00000493758 MYO1BO43795 1136 aa6.66□□□□□ -1.34
ITGB1-216ENST00000493758 KCNJ6P48051 423 aa6.66□□□□□ -1.34
ITGB1-216ENST00000493758 RPL11P62913 178 aaKnown RBP6.66□□□□□ -1.34
ITGB1-216ENST00000493758 SRSF3P84103 164 aaKnown RBP6.66□□□□□ -1.34
ITGB1-216ENST00000493758 SSRP1Q08945 709 aaKnown RBP6.66□□□□□ -1.34
ITGB1-216ENST00000493758 SLC9A5Q14940 896 aa6.66□□□□□ -1.34
ITGB1-216ENST00000493758 MROH9Q5TGP6 573 aa6.66□□□□□ -1.34
ITGB1-216ENST00000493758 STYK1Q6J9G0 422 aa6.66□□□□□ -1.34
ITGB1-216ENST00000493758 ZC3H14Q6PJT7 736 aaKnown RBP6.66□□□□□ -1.34
ITGB1-216ENST00000493758 TMC6Q7Z403 805 aa6.66□□□□□ -1.34
ITGB1-216ENST00000493758 DCP2Q8IU60 420 aaKnown RBP6.66□□□□□ -1.34
ITGB1-216ENST00000493758 PEX11GQ96HA9 241 aa6.66□□□□□ -1.34
ITGB1-216ENST00000493758 RNF38Q9H0F5 515 aa6.66□□□□□ -1.34
ITGB1-216ENST00000493758 NUDT5Q9UKK9 219 aa6.66□□□□□ -1.34
ITGB1-216ENST00000493758 RWDD3Q9Y3V2 267 aa6.66□□□□□ -1.34
ITGB1-216ENST00000493758 TIMM13Q9Y5L4 95 aaPredicted RBP6.66□□□□□ -1.34
ITGB1-216ENST00000493758 A0A1W2PQJ5 194 aa6.65□□□□□ -1.34
ITGB1-216ENST00000493758 FAM221BA6H8Z2 402 aa6.65□□□□□ -1.34
ITGB1-216ENST00000493758 H7BY64 318 aa6.65□□□□□ -1.34
ITGB1-216ENST00000493758 N4BP3O15049 544 aa6.65□□□□□ -1.34
ITGB1-216ENST00000493758 SDHBP21912 280 aa6.65□□□□□ -1.34
ITGB1-216ENST00000493758 TACR1P25103 407 aa6.65□□□□□ -1.34
ITGB1-216ENST00000493758 RAP1GAPP47736 663 aa6.65□□□□□ -1.34
ITGB1-216ENST00000493758 IFRD2Q12894 506 aaPredicted RBP6.65□□□□□ -1.34
ITGB1-216ENST00000493758 NFE2L2Q16236 605 aa6.65□□□□□ -1.34
ITGB1-216ENST00000493758 NSMFQ6X4W1 530 aa6.65□□□□□ -1.34
ITGB1-216ENST00000493758 DPH6Q7L8W6 267 aa6.65□□□□□ -1.34
ITGB1-216ENST00000493758 RCBTB1Q8NDN9 531 aa6.65□□□□□ -1.34
ITGB1-216ENST00000493758 DCAF4Q8WV16 495 aa6.65□□□□□ -1.34
ITGB1-216ENST00000493758 CNTD2Q9H8S5 307 aa6.65□□□□□ -1.34
ITGB1-216ENST00000493758 PCDHA5Q9Y5H7 936 aa6.65□□□□□ -1.34
ITGB1-216ENST00000493758 DBX1A6NMT0 343 aa6.64□□□□□ -1.35
ITGB1-216ENST00000493758 DIAPH1O60610 1272 aaKnown RBP6.64□□□□□ -1.35
ITGB1-216ENST00000493758 ZBTB7AO95365 584 aa6.64□□□□□ -1.35
ITGB1-216ENST00000493758 TMEM253P0C7T8 217 aa6.64□□□□□ -1.35
ITGB1-216ENST00000493758 IGFBP6P24592 240 aaPredicted RBP6.64□□□□□ -1.35
ITGB1-216ENST00000493758 NTRK3Q16288 839 aa6.64□□□□□ -1.35
ITGB1-216ENST00000493758 YOD1Q5VVQ6 348 aaPredicted RBP6.64□□□□□ -1.35
ITGB1-216ENST00000493758 SCUBE1Q8IWY4 988 aa6.64□□□□□ -1.35
ITGB1-216ENST00000493758 SRPK1Q96SB4 655 aaKnown RBP6.64□□□□□ -1.35
ITGB1-216ENST00000493758 DNAJC2Q99543 621 aaKnown RBP6.64□□□□□ -1.35
ITGB1-216ENST00000493758 CDIP1Q9H305 208 aa6.64□□□□□ -1.35
ITGB1-216ENST00000493758 SIRT5Q9NXA8 310 aa6.64□□□□□ -1.35
ITGB1-216ENST00000493758 MARCH2Q9P0N8 246 aa6.64□□□□□ -1.35
ITGB1-216ENST00000493758 TCAF2A6NFQ2 919 aa6.63□□□□□ -1.35
ITGB1-216ENST00000493758 PRODHO43272 600 aa6.63□□□□□ -1.35
ITGB1-216ENST00000493758 C1QTNF9P0C862 333 aa6.63□□□□□ -1.35
ITGB1-216ENST00000493758 CDR1P51861 262 aa6.63□□□□□ -1.35
ITGB1-216ENST00000493758 SUMO1P63165 101 aaKnown RBP6.63□□□□□ -1.35
ITGB1-216ENST00000493758 KRTAP19-4Q3LI73 84 aa6.63□□□□□ -1.35
ITGB1-216ENST00000493758 EMC4Q5J8M3 183 aa6.63□□□□□ -1.35
ITGB1-216ENST00000493758 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.63□□□□□ -1.35
ITGB1-216ENST00000493758 MZB1Q8WU39 189 aa6.63□□□□□ -1.35
ITGB1-216ENST00000493758 KCNK12Q9HB15 430 aa6.63□□□□□ -1.35
ITGB1-216ENST00000493758 FBXL7Q9UJT9 491 aa6.63□□□□□ -1.35
ITGB1-216ENST00000493758 C22orf46C9J442 243 aa6.62□□□□□ -1.35
ITGB1-216ENST00000493758 LINC00310P59036 64 aa6.62□□□□□ -1.35
ITGB1-216ENST00000493758 JAG1P78504 1218 aa6.62□□□□□ -1.35
ITGB1-216ENST00000493758 CAP1Q01518 475 aa6.62□□□□□ -1.35
ITGB1-216ENST00000493758 LSAMPQ13449 338 aa6.62□□□□□ -1.35
ITGB1-216ENST00000493758 KCNA10Q16322 511 aa6.62□□□□□ -1.35
ITGB1-216ENST00000493758 C2orf27AQ580R0 203 aa6.62□□□□□ -1.35
ITGB1-216ENST00000493758 ATG14Q6ZNE5 492 aa6.62□□□□□ -1.35
ITGB1-216ENST00000493758 MAMDC2Q7Z304 686 aaPredicted RBP6.62□□□□□ -1.35
ITGB1-216ENST00000493758 LDHDQ86WU2 507 aa6.62□□□□□ -1.35
ITGB1-216ENST00000493758 IGDCC3Q8IVU1 814 aa6.62□□□□□ -1.35
ITGB1-216ENST00000493758 CPA5Q8WXQ8 436 aa6.62□□□□□ -1.35
ITGB1-216ENST00000493758 SEC14L1Q92503 715 aa6.62□□□□□ -1.35
ITGB1-216ENST00000493758 KCNN1Q92952 543 aa6.62□□□□□ -1.35
ITGB1-216ENST00000493758 KISS1RQ969F8 398 aaPredicted RBP6.62□□□□□ -1.35
ITGB1-216ENST00000493758 TMEM169Q96HH4 297 aa6.62□□□□□ -1.35
ITGB1-216ENST00000493758 SIGLEC10Q96LC7 697 aa6.62□□□□□ -1.35
ITGB1-216ENST00000493758 PHF20Q9BVI0 1012 aa6.62□□□□□ -1.35
ITGB1-216ENST00000493758 ZNF652Q9Y2D9 606 aa6.62□□□□□ -1.35
ITGB1-216ENST00000493758 TRBV23-1A0A0A0MS06 115 aa6.61□□□□□ -1.35
ITGB1-216ENST00000493758 CCDC85CA6NKD9 419 aa6.61□□□□□ -1.35
ITGB1-216ENST00000493758 F8W031 263 aaPredicted RBP6.61□□□□□ -1.35
ITGB1-216ENST00000493758 FUCA1P04066 466 aa6.61□□□□□ -1.35
ITGB1-216ENST00000493758 NTRK1P04629 796 aa6.61□□□□□ -1.35
ITGB1-216ENST00000493758 C6orf222P0C671 652 aaPredicted RBP6.61□□□□□ -1.35
ITGB1-216ENST00000493758 LCP1P13796 627 aa6.61□□□□□ -1.35
ITGB1-216ENST00000493758 BCL6P41182 706 aa6.61□□□□□ -1.35
ITGB1-216ENST00000493758 EPHB3P54753 998 aa6.61□□□□□ -1.35
ITGB1-216ENST00000493758 GPR85P60893 370 aa6.61□□□□□ -1.35
ITGB1-216ENST00000493758 PRR5P85299 388 aa6.61□□□□□ -1.35
ITGB1-216ENST00000493758 ZNF200P98182 395 aaPredicted RBP6.61□□□□□ -1.35
ITGB1-216ENST00000493758 TARBP2Q15633 366 aaKnown RBP6.61□□□□□ -1.35
ITGB1-216ENST00000493758 KIZQ2M2Z5 673 aa6.61□□□□□ -1.35
ITGB1-216ENST00000493758 CYP4F22Q6NT55 531 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms