RNA–Protein interactions for RNA: ENST00000493191.1

HMG20B-214, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 852 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-214ENST00000493191 RNF41Q9H4P4 317 aaPredicted RBP26.42■■□□□ 1.82
HMG20B-214ENST00000493191 PCDHA11Q9Y5I1 949 aa26.42■■□□□ 1.82
HMG20B-214ENST00000493191 RAD50Q92878 1312 aa26.41■■□□□ 1.82
HMG20B-214ENST00000493191 GPATCH4Q5T3I0 446 aaKnown RBP26.41■■□□□ 1.82
HMG20B-214ENST00000493191 B4GALNT3Q6L9W6 998 aa26.41■■□□□ 1.82
HMG20B-214ENST00000493191 ATXN2LQ8WWM7 1075 aaKnown RBP26.41■■□□□ 1.82
HMG20B-214ENST00000493191 THEGQ9P2T0 379 aa26.41■■□□□ 1.82
HMG20B-214ENST00000493191 A6NJR5 290 aa26.4■■□□□ 1.82
HMG20B-214ENST00000493191 PFKMP08237 780 aa26.4■■□□□ 1.82
HMG20B-214ENST00000493191 SDSP20132 328 aa26.4■■□□□ 1.82
HMG20B-214ENST00000493191 CHMP4BP1P59074 171 aa26.4■■□□□ 1.82
HMG20B-214ENST00000493191 NFRKBQ6P4R8 1299 aa26.4■■□□□ 1.82
HMG20B-214ENST00000493191 B4DLN1 442 aa26.39■■□□□ 1.82
HMG20B-214ENST00000493191 TNFRSF10AO00220 468 aa26.39■■□□□ 1.82
HMG20B-214ENST00000493191 ZNF213O14771 459 aa26.39■■□□□ 1.82
HMG20B-214ENST00000493191 KPNA6O60684 536 aa26.39■■□□□ 1.82
HMG20B-214ENST00000493191 ARIH2O95376 493 aa26.39■■□□□ 1.82
HMG20B-214ENST00000493191 MRPL12P52815 198 aaKnown RBP26.39■■□□□ 1.82
HMG20B-214ENST00000493191 MFAP1P55081 439 aaKnown RBP26.39■■□□□ 1.82
HMG20B-214ENST00000493191 DGKHQ86XP1 1220 aa26.39■■□□□ 1.82
HMG20B-214ENST00000493191 TBC1D5Q92609 795 aa26.39■■□□□ 1.82
HMG20B-214ENST00000493191 ASB2Q96Q27 587 aa26.39■■□□□ 1.82
HMG20B-214ENST00000493191 CDC37Q16543 378 aaPredicted RBP26.38■■□□□ 1.81
HMG20B-214ENST00000493191 RETREG2Q8NC44 543 aa26.38■■□□□ 1.81
HMG20B-214ENST00000493191 RGS22Q8NE09 1264 aa26.38■■□□□ 1.81
HMG20B-214ENST00000493191 NCOR1O75376 2440 aa26.38■■□□□ 1.81
HMG20B-214ENST00000493191 TRIP12Q14669 1992 aaPredicted RBP26.37■■□□□ 1.81
HMG20B-214ENST00000493191 KDM4AO75164 1064 aa26.37■■□□□ 1.81
HMG20B-214ENST00000493191 MICALL1Q8N3F8 863 aa26.37■■□□□ 1.81
HMG20B-214ENST00000493191 PNMA1Q8ND90 353 aa26.37■■□□□ 1.81
HMG20B-214ENST00000493191 TAAR1Q96RJ0 339 aa26.37■■□□□ 1.81
HMG20B-214ENST00000493191 REV3LO60673 3130 aa26.37■■□□□ 1.81
HMG20B-214ENST00000493191 TET1Q8NFU7 2136 aa26.36■■□□□ 1.81
HMG20B-214ENST00000493191 IQCF3P0C7M6 154 aa26.36■■□□□ 1.81
HMG20B-214ENST00000493191 ACTN1P12814 892 aa26.36■■□□□ 1.81
HMG20B-214ENST00000493191 MRPS5P82675 430 aaKnown RBP26.36■■□□□ 1.81
HMG20B-214ENST00000493191 TMEM67Q5HYA8 995 aa26.36■■□□□ 1.81
HMG20B-214ENST00000493191 CWC27Q6UX04 472 aaKnown RBP26.36■■□□□ 1.81
HMG20B-214ENST00000493191 SEPT14Q6ZU15 432 aa26.36■■□□□ 1.81
HMG20B-214ENST00000493191 IQCA1Q86XH1 822 aa26.36■■□□□ 1.81
HMG20B-214ENST00000493191 PITPNM1O00562 1244 aa26.35■■□□□ 1.81
HMG20B-214ENST00000493191 RFC2P35250 354 aa26.35■■□□□ 1.81
HMG20B-214ENST00000493191 PTPN11Q06124 597 aaPredicted RBP26.35■■□□□ 1.81
HMG20B-214ENST00000493191 LY6KQ17RY6 165 aa26.35■■□□□ 1.81
HMG20B-214ENST00000493191 CCDC62Q6P9F0 684 aa26.35■■□□□ 1.81
HMG20B-214ENST00000493191 PLEKHM2Q8IWE5 1019 aa26.35■■□□□ 1.81
HMG20B-214ENST00000493191 ADGRF4Q8IZF3 695 aa26.35■■□□□ 1.81
HMG20B-214ENST00000493191 SYTL5Q8TDW5 730 aaPredicted RBP26.35■■□□□ 1.81
HMG20B-214ENST00000493191 AFG1LQ8WV93 481 aa26.35■■□□□ 1.81
HMG20B-214ENST00000493191 FTOQ9C0B1 505 aaKnown RBP eCLIP26.35■■□□□ 1.81
HMG20B-214ENST00000493191 KAT14Q9H8E8 782 aa26.35■■□□□ 1.81
HMG20B-214ENST00000493191 NOD1Q9Y239 953 aa26.35■■□□□ 1.81
HMG20B-214ENST00000493191 ABCB11O95342 1321 aa26.35■■□□□ 1.81
HMG20B-214ENST00000493191 PRRC2BQ5JSZ5 2229 aaKnown RBP26.34■■□□□ 1.81
HMG20B-214ENST00000493191 MYH6P13533 1939 aa26.34■■□□□ 1.81
HMG20B-214ENST00000493191 B4E1Z4 1266 aa26.34■■□□□ 1.81
HMG20B-214ENST00000493191 CA3P07451 260 aa26.34■■□□□ 1.81
HMG20B-214ENST00000493191 BFSP2Q13515 415 aa26.34■■□□□ 1.81
HMG20B-214ENST00000493191 CCDC178Q5BJE1 867 aa26.34■■□□□ 1.81
HMG20B-214ENST00000493191 SMC5Q8IY18 1101 aa26.34■■□□□ 1.81
HMG20B-214ENST00000493191 CERS4Q9HA82 394 aa26.34■■□□□ 1.81
HMG20B-214ENST00000493191 COL20A1Q9P218 1284 aa26.34■■□□□ 1.81
HMG20B-214ENST00000493191 RFXAPO00287 272 aa26.33■■□□□ 1.81
HMG20B-214ENST00000493191 CHST3Q7LGC8 479 aa26.33■■□□□ 1.81
HMG20B-214ENST00000493191 CHD1LQ86WJ1 897 aa26.33■■□□□ 1.81
HMG20B-214ENST00000493191 ADAMTS19Q8TE59 1207 aa26.33■■□□□ 1.81
HMG20B-214ENST00000493191 NSUN6Q8TEA1 469 aaKnown RBP26.33■■□□□ 1.81
HMG20B-214ENST00000493191 ANKS1AQ92625 1134 aa26.33■■□□□ 1.81
HMG20B-214ENST00000493191 ZSCAN10Q96SZ4 725 aaPredicted RBP26.33■■□□□ 1.81
HMG20B-214ENST00000493191 RWDD1Q9H446 243 aaPredicted RBP26.33■■□□□ 1.81
HMG20B-214ENST00000493191 VAT1LQ9HCJ6 419 aa26.33■■□□□ 1.81
HMG20B-214ENST00000493191 LAMA4Q16363 1823 aa26.32■■□□□ 1.8
HMG20B-214ENST00000493191 DHX16O60231 1041 aaKnown RBP26.32■■□□□ 1.8
HMG20B-214ENST00000493191 GH1P01241 217 aa26.32■■□□□ 1.8
HMG20B-214ENST00000493191 MMP3P08254 477 aa26.32■■□□□ 1.8
HMG20B-214ENST00000493191 PTGISQ16647 500 aa26.32■■□□□ 1.8
HMG20B-214ENST00000493191 QRICH1Q2TAL8 776 aa26.32■■□□□ 1.8
HMG20B-214ENST00000493191 ENAHQ8N8S7 591 aaPredicted RBP26.32■■□□□ 1.8
HMG20B-214ENST00000493191 SLC9A7Q96T83 725 aa26.32■■□□□ 1.8
HMG20B-214ENST00000493191 RMDN3Q96TC7 470 aa26.32■■□□□ 1.8
HMG20B-214ENST00000493191 DIAPH3Q9NSV4 1193 aa26.32■■□□□ 1.8
HMG20B-214ENST00000493191 ZSWIM5Q9P217 1185 aa26.32■■□□□ 1.8
HMG20B-214ENST00000493191 TANC1Q9C0D5 1861 aa26.32■■□□□ 1.8
HMG20B-214ENST00000493191 KIAA1217Q5T5P2 1943 aa26.31■■□□□ 1.8
HMG20B-214ENST00000493191 TRANK1O15050 2925 aa26.31■■□□□ 1.8
HMG20B-214ENST00000493191 ARHGAP1Q07960 439 aa26.31■■□□□ 1.8
HMG20B-214ENST00000493191 STXBP2Q15833 593 aa26.31■■□□□ 1.8
HMG20B-214ENST00000493191 ASPRV1Q53RT3 343 aa26.31■■□□□ 1.8
HMG20B-214ENST00000493191 MCF2L2Q86YR7 1114 aa26.31■■□□□ 1.8
HMG20B-214ENST00000493191 TSPYL2Q9H2G4 693 aaPredicted RBP26.31■■□□□ 1.8
HMG20B-214ENST00000493191 OSBPL3Q9H4L5 887 aa26.31■■□□□ 1.8
HMG20B-214ENST00000493191 TCF20Q9UGU0 1960 aaKnown RBP26.31■■□□□ 1.8
HMG20B-214ENST00000493191 XIRP2A4UGR9 3374 aa26.3■■□□□ 1.8
HMG20B-214ENST00000493191 IGHDP01880 384 aa26.3■■□□□ 1.8
HMG20B-214ENST00000493191 PARP1P09874 1014 aaKnown RBP26.3■■□□□ 1.8
HMG20B-214ENST00000493191 GDF6Q6KF10 455 aaPredicted RBP26.3■■□□□ 1.8
HMG20B-214ENST00000493191 FBXO11Q86XK2 927 aa26.3■■□□□ 1.8
HMG20B-214ENST00000493191 IL27Q8NEV9 243 aa26.3■■□□□ 1.8
HMG20B-214ENST00000493191 PHOSPHO2Q8TCD6 241 aa26.3■■□□□ 1.8
HMG20B-214ENST00000493191 KAT2BQ92831 832 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms