RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 NRBP1Q9UHY1 535 aa15.43■□□□□ 0.06
MSH6-208ENST00000493177 DNM1LO00429 736 aa15.42■□□□□ 0.06
MSH6-208ENST00000493177 AKR1A1P14550 325 aa15.42■□□□□ 0.06
MSH6-208ENST00000493177 PDCP20941 246 aa15.42■□□□□ 0.06
MSH6-208ENST00000493177 NAPAP54920 295 aa15.42■□□□□ 0.06
MSH6-208ENST00000493177 GJC2Q5T442 439 aaPredicted RBP15.42■□□□□ 0.06
MSH6-208ENST00000493177 WWC2Q6AWC2 1192 aa15.42■□□□□ 0.06
MSH6-208ENST00000493177 CHRDL2Q6WN34 429 aa15.42■□□□□ 0.06
MSH6-208ENST00000493177 MSL3Q8N5Y2 521 aaKnown RBP15.42■□□□□ 0.06
MSH6-208ENST00000493177 AMNQ9BXJ7 453 aa15.42■□□□□ 0.06
MSH6-208ENST00000493177 VPS54Q9P1Q0 977 aa15.42■□□□□ 0.06
MSH6-208ENST00000493177 PFASO15067 1338 aa15.42■□□□□ 0.06
MSH6-208ENST00000493177 ZNF536O15090 1300 aa15.42■□□□□ 0.06
MSH6-208ENST00000493177 SYNGAP1Q96PV0 1343 aa15.42■□□□□ 0.06
MSH6-208ENST00000493177 hCG_1984214I3L0E3 225 aa15.41■□□□□ 0.06
MSH6-208ENST00000493177 ICAM1P05362 532 aa15.41■□□□□ 0.06
MSH6-208ENST00000493177 TAL1P17542 331 aaPredicted RBP15.41■□□□□ 0.06
MSH6-208ENST00000493177 GUCY1B3Q02153 619 aa15.41■□□□□ 0.06
MSH6-208ENST00000493177 TRAF1Q13077 416 aa15.41■□□□□ 0.06
MSH6-208ENST00000493177 ZNF713Q8N859 430 aaPredicted RBP15.41■□□□□ 0.06
MSH6-208ENST00000493177 CCDC12Q8WUD4 166 aaPredicted RBP15.41■□□□□ 0.06
MSH6-208ENST00000493177 A1CFQ9NQ94 594 aaKnown RBP15.41■□□□□ 0.06
MSH6-208ENST00000493177 XPNPEP3Q9NQH7 507 aa15.41■□□□□ 0.06
MSH6-208ENST00000493177 BARHL2Q9NY43 387 aa15.41■□□□□ 0.06
MSH6-208ENST00000493177 PNMA2Q9UL42 364 aa15.41■□□□□ 0.06
MSH6-208ENST00000493177 PCDHA1Q9Y5I3 950 aa15.41■□□□□ 0.06
MSH6-208ENST00000493177 DNAJC25-GNG10A0A024R161 153 aa15.4■□□□□ 0.06
MSH6-208ENST00000493177 VPS37CA5D8V6 355 aaPredicted RBP15.4■□□□□ 0.06
MSH6-208ENST00000493177 STXBP3O00186 592 aa15.4■□□□□ 0.06
MSH6-208ENST00000493177 PPP1R11O60927 126 aaPredicted RBP15.4■□□□□ 0.06
MSH6-208ENST00000493177 MNX1P50219 401 aaPredicted RBP15.4■□□□□ 0.06
MSH6-208ENST00000493177 ATN1P54259 1190 aaPredicted RBP15.4■□□□□ 0.06
MSH6-208ENST00000493177 NLRP5P59047 1200 aa15.4■□□□□ 0.06
MSH6-208ENST00000493177 ZNF467Q7Z7K2 595 aaPredicted RBP15.4■□□□□ 0.06
MSH6-208ENST00000493177 RNF180Q86T96 592 aa15.4■□□□□ 0.06
MSH6-208ENST00000493177 CCDC148Q8NFR7 591 aa15.4■□□□□ 0.06
MSH6-208ENST00000493177 GJB4Q9NTQ9 266 aa15.4■□□□□ 0.06
MSH6-208ENST00000493177 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.4■□□□□ 0.06
MSH6-208ENST00000493177 FAM184BQ9ULE4 1060 aa15.4■□□□□ 0.06
MSH6-208ENST00000493177 ZMYND8Q9ULU4 1186 aaPredicted RBP15.4■□□□□ 0.06
MSH6-208ENST00000493177 KCNJ14Q9UNX9 436 aa15.4■□□□□ 0.06
MSH6-208ENST00000493177 COLQQ9Y215 455 aaPredicted RBP15.4■□□□□ 0.06
MSH6-208ENST00000493177 BRCA2P51587 3418 aa15.4■□□□□ 0.06
MSH6-208ENST00000493177 ABCB11O95342 1321 aa15.4■□□□□ 0.06
MSH6-208ENST00000493177 SYT1P21579 422 aa15.39■□□□□ 0.05
MSH6-208ENST00000493177 CNTN2Q02246 1040 aa15.39■□□□□ 0.05
MSH6-208ENST00000493177 MUM1L1Q5H9M0 696 aa15.39■□□□□ 0.05
MSH6-208ENST00000493177 KRT40Q6A162 431 aa15.39■□□□□ 0.05
MSH6-208ENST00000493177 PPP1R18Q6NYC8 613 aa15.39■□□□□ 0.05
MSH6-208ENST00000493177 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.39■□□□□ 0.052e-7■■■■□ 25.1
MSH6-208ENST00000493177 ARMCX2Q7L311 632 aa15.39■□□□□ 0.05
MSH6-208ENST00000493177 SH3GLB2Q9NR46 395 aa15.39■□□□□ 0.05
MSH6-208ENST00000493177 MRPL11Q9Y3B7 192 aaKnown RBP15.39■□□□□ 0.05
MSH6-208ENST00000493177 SMCO2A6NFE2 343 aa15.38■□□□□ 0.05
MSH6-208ENST00000493177 ASB14A6NK59 587 aa15.38■□□□□ 0.05
MSH6-208ENST00000493177 STX6O43752 255 aa15.38■□□□□ 0.05
MSH6-208ENST00000493177 IGHA2P01877 340 aa15.38■□□□□ 0.05
MSH6-208ENST00000493177 ZNF865P0CJ78 1059 aaPredicted RBP15.38■□□□□ 0.05
MSH6-208ENST00000493177 SYN1P17600 705 aa15.38■□□□□ 0.05
MSH6-208ENST00000493177 ACVR2BQ13705 512 aa15.38■□□□□ 0.05
MSH6-208ENST00000493177 GNL2Q13823 731 aaKnown RBP15.38■□□□□ 0.05
MSH6-208ENST00000493177 SAFBQ15424 915 aaKnown RBP eCLIP15.38■□□□□ 0.05
MSH6-208ENST00000493177 HABP4Q5JVS0 413 aaKnown RBP15.38■□□□□ 0.05
MSH6-208ENST00000493177 MAMDC4Q6UXC1 1216 aa15.38■□□□□ 0.05
MSH6-208ENST00000493177 MPHOSPH6Q99547 160 aaKnown RBP15.38■□□□□ 0.05
MSH6-208ENST00000493177 ABHD16BQ9H3Z7 469 aa15.38■□□□□ 0.05
MSH6-208ENST00000493177 SPC25Q9HBM1 224 aa15.38■□□□□ 0.05
MSH6-208ENST00000493177 BRMS1Q9HCU9 246 aa15.38■□□□□ 0.05
MSH6-208ENST00000493177 C6orf50Q9HD87 102 aa15.38■□□□□ 0.05
MSH6-208ENST00000493177 PRKAG2Q9UGJ0 569 aa15.38■□□□□ 0.05
MSH6-208ENST00000493177 LCTP09848 1927 aa15.37■□□□□ 0.05
MSH6-208ENST00000493177 SNAI1O95863 264 aaPredicted RBP15.37■□□□□ 0.05
MSH6-208ENST00000493177 PGK1P00558 417 aa15.37■□□□□ 0.05
MSH6-208ENST00000493177 COL6A1P12109 1028 aa15.37■□□□□ 0.05
MSH6-208ENST00000493177 CALML3P27482 149 aa15.37■□□□□ 0.05
MSH6-208ENST00000493177 ADCY7P51828 1080 aa15.37■□□□□ 0.05
MSH6-208ENST00000493177 LRRC41Q15345 812 aa15.37■□□□□ 0.05
MSH6-208ENST00000493177 LRRC26Q2I0M4 334 aa15.37■□□□□ 0.05
MSH6-208ENST00000493177 FOXD4L5Q5VV16 416 aaPredicted RBP15.37■□□□□ 0.05
MSH6-208ENST00000493177 MCTP1Q6DN14 999 aa15.37■□□□□ 0.05
MSH6-208ENST00000493177 TYW1BQ6NUM6 668 aa15.37■□□□□ 0.05
MSH6-208ENST00000493177 FBXO18Q8NFZ0 1043 aa15.37■□□□□ 0.05
MSH6-208ENST00000493177 FOXD4L4Q8WXT5 416 aaPredicted RBP15.37■□□□□ 0.05
MSH6-208ENST00000493177 FERMT2Q96AC1 680 aa15.37■□□□□ 0.05
MSH6-208ENST00000493177 LENG1Q96BZ8 264 aaPredicted RBP15.37■□□□□ 0.05
MSH6-208ENST00000493177 CYP39A1Q9NYL5 469 aa15.37■□□□□ 0.05
MSH6-208ENST00000493177 ADD3Q9UEY8 706 aaKnown RBP15.37■□□□□ 0.05
MSH6-208ENST00000493177 ATP11BQ9Y2G3 1177 aa15.37■□□□□ 0.05
MSH6-208ENST00000493177 LRRC37A2A6NM11 1700 aa15.37■□□□□ 0.05
MSH6-208ENST00000493177 MMP1P03956 469 aa15.36■□□□□ 0.05
MSH6-208ENST00000493177 GNA11P29992 359 aa15.36■□□□□ 0.05
MSH6-208ENST00000493177 KRT2P35908 639 aa15.36■□□□□ 0.05
MSH6-208ENST00000493177 ADCYAP1R1P41586 468 aa15.36■□□□□ 0.05
MSH6-208ENST00000493177 RNF207Q6ZRF8 634 aa15.36■□□□□ 0.05
MSH6-208ENST00000493177 FAM133AQ8N9E0 248 aa15.36■□□□□ 0.05
MSH6-208ENST00000493177 CUL5Q93034 780 aa15.36■□□□□ 0.05
MSH6-208ENST00000493177 PHF20Q9BVI0 1012 aa15.36■□□□□ 0.05
MSH6-208ENST00000493177 PSTPIP2Q9H939 334 aa15.36■□□□□ 0.05
MSH6-208ENST00000493177 NFIBO00712 420 aa15.35■□□□□ 0.05
MSH6-208ENST00000493177 C6orf222P0C671 652 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms