RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 ITGA7Q13683 1181 aa13.36□□□□□ -0.27
LRTM1-202ENST00000493075 TTLL4Q14679 1199 aa13.36□□□□□ -0.27
LRTM1-202ENST00000493075 BRDTQ58F21 947 aaPredicted RBP13.36□□□□□ -0.27
LRTM1-202ENST00000493075 MFSD5Q6N075 450 aa13.36□□□□□ -0.27
LRTM1-202ENST00000493075 RMDN3Q96TC7 470 aa13.36□□□□□ -0.27
LRTM1-202ENST00000493075 SENP2Q9HC62 589 aa13.36□□□□□ -0.27
LRTM1-202ENST00000493075 PCDHA1Q9Y5I3 950 aa13.36□□□□□ -0.27
LRTM1-202ENST00000493075 GRIN2DO15399 1336 aa13.35□□□□□ -0.27
LRTM1-202ENST00000493075 PNMA6FA0A0J9YX94 578 aa13.35□□□□□ -0.27
LRTM1-202ENST00000493075 A6NJR5 290 aa13.35□□□□□ -0.27
LRTM1-202ENST00000493075 OPLAHO14841 1288 aa13.35□□□□□ -0.27
LRTM1-202ENST00000493075 SLC27A2O14975 620 aa13.35□□□□□ -0.27
LRTM1-202ENST00000493075 PPP1R11O60927 126 aaPredicted RBP13.35□□□□□ -0.27
LRTM1-202ENST00000493075 MCM5P33992 734 aa13.35□□□□□ -0.27
LRTM1-202ENST00000493075 FPGSQ05932 587 aa13.35□□□□□ -0.27
LRTM1-202ENST00000493075 PPP2R5BQ15173 497 aa13.35□□□□□ -0.27
LRTM1-202ENST00000493075 STXBP2Q15833 593 aa13.35□□□□□ -0.27
LRTM1-202ENST00000493075 SLC35G1Q2M3R5 365 aa13.35□□□□□ -0.27
LRTM1-202ENST00000493075 C9orf50Q5SZB4 431 aa13.35□□□□□ -0.27
LRTM1-202ENST00000493075 CCDC62Q6P9F0 684 aa13.35□□□□□ -0.27
LRTM1-202ENST00000493075 CASC1Q6TDU7 716 aa13.35□□□□□ -0.27
LRTM1-202ENST00000493075 CHST3Q7LGC8 479 aa13.35□□□□□ -0.27
LRTM1-202ENST00000493075 OR6J1Q8NGC5 347 aa13.35□□□□□ -0.27
LRTM1-202ENST00000493075 TMEM87BQ96K49 555 aa13.35□□□□□ -0.27
LRTM1-202ENST00000493075 COL20A1Q9P218 1284 aa13.35□□□□□ -0.27
LRTM1-202ENST00000493075 CYTH3O43739 400 aa13.34□□□□□ -0.27
LRTM1-202ENST00000493075 EIF3JO75822 258 aaKnown RBP13.34□□□□□ -0.27
LRTM1-202ENST00000493075 DDAH1O94760 285 aa13.34□□□□□ -0.27
LRTM1-202ENST00000493075 CFBP00751 764 aa13.34□□□□□ -0.27
LRTM1-202ENST00000493075 TXNP10599 105 aaKnown RBP13.34□□□□□ -0.27
LRTM1-202ENST00000493075 PTGS1P23219 599 aa13.34□□□□□ -0.27
LRTM1-202ENST00000493075 PURAQ00577 322 aaKnown RBP13.34□□□□□ -0.27
LRTM1-202ENST00000493075 ARHGEF16Q5VV41 709 aa13.34□□□□□ -0.27
LRTM1-202ENST00000493075 CREB3L3Q68CJ9 461 aa13.34□□□□□ -0.27
LRTM1-202ENST00000493075 DEFB123Q8N688 67 aa13.34□□□□□ -0.27
LRTM1-202ENST00000493075 PIGSQ96S52 555 aa13.34□□□□□ -0.27
LRTM1-202ENST00000493075 LZTS2Q9BRK4 669 aa13.34□□□□□ -0.27
LRTM1-202ENST00000493075 MTG1Q9BT17 334 aaPredicted RBP13.34□□□□□ -0.27
LRTM1-202ENST00000493075 LY9Q9HBG7 655 aa13.34□□□□□ -0.27
LRTM1-202ENST00000493075 GPHNQ9NQX3 736 aaPredicted RBP13.34□□□□□ -0.27
LRTM1-202ENST00000493075 PRC1O43663 620 aa13.33□□□□□ -0.28
LRTM1-202ENST00000493075 NR3C2P08235 984 aa13.33□□□□□ -0.28
LRTM1-202ENST00000493075 KIF5BP33176 963 aa13.33□□□□□ -0.28
LRTM1-202ENST00000493075 LIFRP42702 1097 aa13.33□□□□□ -0.28
LRTM1-202ENST00000493075 GNAQP50148 359 aa13.33□□□□□ -0.28
LRTM1-202ENST00000493075 EPHB4P54760 987 aa13.33□□□□□ -0.28
LRTM1-202ENST00000493075 SMAD3P84022 425 aaKnown RBP13.33□□□□□ -0.28
LRTM1-202ENST00000493075 PPIGQ13427 754 aaKnown RBP eCLIP13.33□□□□□ -0.28
LRTM1-202ENST00000493075 TMEM199Q8N511 208 aa13.33□□□□□ -0.28
LRTM1-202ENST00000493075 ANO2Q9NQ90 1003 aa13.33□□□□□ -0.28
LRTM1-202ENST00000493075 PXMP2Q9NR77 195 aa13.33□□□□□ -0.28
LRTM1-202ENST00000493075 SZT2Q5T011 3432 aa13.32□□□□□ -0.28
LRTM1-202ENST00000493075 GCOM1H8Y6P7 765 aaPredicted RBP13.32□□□□□ -0.28
LRTM1-202ENST00000493075 SH2B2O14492 632 aaPredicted RBP13.32□□□□□ -0.28
LRTM1-202ENST00000493075 ARIH2O95376 493 aa13.32□□□□□ -0.28
LRTM1-202ENST00000493075 MYL3P08590 195 aa13.32□□□□□ -0.28
LRTM1-202ENST00000493075 SUPT20HL2P0C7V6 817 aa13.32□□□□□ -0.28
LRTM1-202ENST00000493075 POLR2MP0CAP2 368 aa13.32□□□□□ -0.28
LRTM1-202ENST00000493075 RNF20Q5VTR2 975 aa13.32□□□□□ -0.28
LRTM1-202ENST00000493075 KCNV1Q6PIU1 500 aa13.32□□□□□ -0.28
LRTM1-202ENST00000493075 SEPT14Q6ZU15 432 aa13.32□□□□□ -0.28
LRTM1-202ENST00000493075 VSIG10LQ86VR7 867 aa13.32□□□□□ -0.28
LRTM1-202ENST00000493075 HOMER1Q86YM7 354 aa13.32□□□□□ -0.28
LRTM1-202ENST00000493075 ZNF654Q8IZM8 581 aa13.32□□□□□ -0.28
LRTM1-202ENST00000493075 CTCFLQ8NI51 663 aaPredicted RBP13.32□□□□□ -0.28
LRTM1-202ENST00000493075 SPZ1Q9BXG8 430 aa13.32□□□□□ -0.28
LRTM1-202ENST00000493075 MTMR10Q9NXD2 777 aa13.32□□□□□ -0.28
LRTM1-202ENST00000493075 LAMA3Q16787 3333 aa13.32□□□□□ -0.28
LRTM1-202ENST00000493075 CCDC69A6NI79 296 aa13.31□□□□□ -0.28
LRTM1-202ENST00000493075 GH1P01241 217 aa13.31□□□□□ -0.28
LRTM1-202ENST00000493075 CALM1P0DP23 149 aa13.31□□□□□ -0.28
LRTM1-202ENST00000493075 CALM2P0DP24 149 aa13.31□□□□□ -0.28
LRTM1-202ENST00000493075 CALM3P0DP25 149 aa13.31□□□□□ -0.28
LRTM1-202ENST00000493075 EIF2AK2P19525 551 aaKnown RBP13.31□□□□□ -0.28
LRTM1-202ENST00000493075 PSMC6P62333 389 aa13.31□□□□□ -0.28
LRTM1-202ENST00000493075 PTPN11Q06124 597 aaPredicted RBP13.31□□□□□ -0.28
LRTM1-202ENST00000493075 TSGA10IPQ3SY00 556 aa13.31□□□□□ -0.28
LRTM1-202ENST00000493075 NFRKBQ6P4R8 1299 aa13.31□□□□□ -0.28
LRTM1-202ENST00000493075 COPS5Q92905 334 aa13.31□□□□□ -0.28
LRTM1-202ENST00000493075 EMID1Q96A84 441 aaPredicted RBP13.31□□□□□ -0.28
LRTM1-202ENST00000493075 RNPC3Q96LT9 517 aaKnown RBP13.31□□□□□ -0.28
LRTM1-202ENST00000493075 PDCD2LQ9BRP1 358 aa13.31□□□□□ -0.28
LRTM1-202ENST00000493075 TRPV6Q9H1D0 765 aa13.31□□□□□ -0.28
LRTM1-202ENST00000493075 ALDH8A1Q9H2A2 487 aaPredicted RBP13.31□□□□□ -0.28
LRTM1-202ENST00000493075 DDX41Q9UJV9 622 aaKnown RBP13.31□□□□□ -0.28
LRTM1-202ENST00000493075 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.3□□□□□ -0.28
LRTM1-202ENST00000493075 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.3□□□□□ -0.28
LRTM1-202ENST00000493075 B4GALT4O60513 344 aa13.3□□□□□ -0.28
LRTM1-202ENST00000493075 CDC45O75419 566 aa13.3□□□□□ -0.28
LRTM1-202ENST00000493075 TGFB3P10600 412 aa13.3□□□□□ -0.28
LRTM1-202ENST00000493075 ARHGAP1Q07960 439 aa13.3□□□□□ -0.28
LRTM1-202ENST00000493075 LY6KQ17RY6 165 aa13.3□□□□□ -0.28
LRTM1-202ENST00000493075 NFXL1Q6ZNB6 911 aa13.3□□□□□ -0.28
LRTM1-202ENST00000493075 Q7L0L9 218 aa13.3□□□□□ -0.28
LRTM1-202ENST00000493075 C16orf59Q7L2K0 433 aa13.3□□□□□ -0.28
LRTM1-202ENST00000493075 SGMS1Q86VZ5 419 aa13.3□□□□□ -0.28
LRTM1-202ENST00000493075 SKAP1Q86WV1 359 aa13.3□□□□□ -0.28
LRTM1-202ENST00000493075 RRP36Q96EU6 259 aaKnown RBP13.3□□□□□ -0.28
LRTM1-202ENST00000493075 NOC4LQ9BVI4 516 aaKnown RBP13.3□□□□□ -0.28
LRTM1-202ENST00000493075 PPP1R12CQ9BZL4 782 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms