RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.57□□□□□ -0.56
TNFRSF9-203ENST00000492571 CTAGE5O15320 804 aa11.57□□□□□ -0.56
TNFRSF9-203ENST00000492571 ALAS1P13196 640 aa11.57□□□□□ -0.56
TNFRSF9-203ENST00000492571 CPT1AP50416 773 aa11.57□□□□□ -0.56
TNFRSF9-203ENST00000492571 TMEM31Q5JXX7 168 aa11.57□□□□□ -0.56
TNFRSF9-203ENST00000492571 EEPD1Q7L9B9 569 aa11.57□□□□□ -0.56
TNFRSF9-203ENST00000492571 DEFB128Q7Z7B8 93 aa11.57□□□□□ -0.56
TNFRSF9-203ENST00000492571 PHOSPHO2Q8TCD6 241 aa11.57□□□□□ -0.56
TNFRSF9-203ENST00000492571 STAG1Q8WVM7 1258 aa11.57□□□□□ -0.56
TNFRSF9-203ENST00000492571 TATDN2Q93075 761 aa11.57□□□□□ -0.56
TNFRSF9-203ENST00000492571 HLA-CQ95604 372 aa11.57□□□□□ -0.56
TNFRSF9-203ENST00000492571 CEP95Q96GE4 821 aa11.57□□□□□ -0.56
TNFRSF9-203ENST00000492571 SCLYQ96I15 445 aa11.57□□□□□ -0.56
TNFRSF9-203ENST00000492571 GPATCH3Q96I76 525 aa11.57□□□□□ -0.56
TNFRSF9-203ENST00000492571 SLC9A7Q96T83 725 aa11.57□□□□□ -0.56
TNFRSF9-203ENST00000492571 MPHOSPH6Q99547 160 aaKnown RBP11.57□□□□□ -0.56
TNFRSF9-203ENST00000492571 FTOQ9C0B1 505 aaKnown RBP eCLIP11.57□□□□□ -0.56
TNFRSF9-203ENST00000492571 ALDH8A1Q9H2A2 487 aaPredicted RBP11.57□□□□□ -0.56
TNFRSF9-203ENST00000492571 A1CFQ9NQ94 594 aaKnown RBP11.57□□□□□ -0.56
TNFRSF9-203ENST00000492571 ADD3Q9UEY8 706 aaKnown RBP11.57□□□□□ -0.56
TNFRSF9-203ENST00000492571 UMODL1Q5DID0 1318 aa11.57□□□□□ -0.56
TNFRSF9-203ENST00000492571 GSG1L2A8MUP6 293 aa11.56□□□□□ -0.56
TNFRSF9-203ENST00000492571 RGS20O76081 388 aa11.56□□□□□ -0.56
TNFRSF9-203ENST00000492571 CA3P07451 260 aa11.56□□□□□ -0.56
TNFRSF9-203ENST00000492571 ZFYP08048 801 aaPredicted RBP11.56□□□□□ -0.56
TNFRSF9-203ENST00000492571 MYOGP15173 224 aa11.56□□□□□ -0.56
TNFRSF9-203ENST00000492571 SMPD1P17405 629 aa11.56□□□□□ -0.56
TNFRSF9-203ENST00000492571 POU3F3P20264 500 aaPredicted RBP11.56□□□□□ -0.56
TNFRSF9-203ENST00000492571 RFC2P35250 354 aa11.56□□□□□ -0.56
TNFRSF9-203ENST00000492571 KCNQ1P51787 676 aa11.56□□□□□ -0.56
TNFRSF9-203ENST00000492571 PSMC6P62333 389 aa11.56□□□□□ -0.56
TNFRSF9-203ENST00000492571 FAM47CQ5HY64 1035 aa11.56□□□□□ -0.56
TNFRSF9-203ENST00000492571 LRRC47Q8N1G4 583 aaKnown RBP11.56□□□□□ -0.56
TNFRSF9-203ENST00000492571 PANK1Q8TE04 598 aa11.56□□□□□ -0.56
TNFRSF9-203ENST00000492571 ARNTL2Q8WYA1 636 aa11.56□□□□□ -0.56
TNFRSF9-203ENST00000492571 FGD4Q96M96 766 aa11.56□□□□□ -0.56
TNFRSF9-203ENST00000492571 LRRCC1Q9C099 1032 aa11.56□□□□□ -0.56
TNFRSF9-203ENST00000492571 KATNBL1Q9H079 304 aa11.56□□□□□ -0.56
TNFRSF9-203ENST00000492571 WNT8AQ9H1J5 351 aa11.56□□□□□ -0.56
TNFRSF9-203ENST00000492571 CERS4Q9HA82 394 aa11.56□□□□□ -0.56
TNFRSF9-203ENST00000492571 VTA1Q9NP79 307 aa11.56□□□□□ -0.56
TNFRSF9-203ENST00000492571 NPDC1Q9NQX5 325 aaPredicted RBP11.56□□□□□ -0.56
TNFRSF9-203ENST00000492571 DDX19BQ9UMR2 479 aa11.56□□□□□ -0.56
TNFRSF9-203ENST00000492571 NOD1Q9Y239 953 aa11.56□□□□□ -0.56
TNFRSF9-203ENST00000492571 MTCH2Q9Y6C9 303 aa11.56□□□□□ -0.56
TNFRSF9-203ENST00000492571 RAD50Q92878 1312 aa11.56□□□□□ -0.56
TNFRSF9-203ENST00000492571 KPNA6O60684 536 aa11.55□□□□□ -0.56
TNFRSF9-203ENST00000492571 PRDM1O75626 825 aa11.55□□□□□ -0.56
TNFRSF9-203ENST00000492571 MYL3P08590 195 aa11.55□□□□□ -0.56
TNFRSF9-203ENST00000492571 BFSP2Q13515 415 aa11.55□□□□□ -0.56
TNFRSF9-203ENST00000492571 NSMFQ6X4W1 530 aa11.55□□□□□ -0.56
TNFRSF9-203ENST00000492571 APPBP2Q92624 585 aa11.55□□□□□ -0.56
TNFRSF9-203ENST00000492571 GMCL1Q96IK5 515 aa11.55□□□□□ -0.56
TNFRSF9-203ENST00000492571 AGBL1Q96MI9 1066 aa11.55□□□□□ -0.56
TNFRSF9-203ENST00000492571 LRFN3Q9BTN0 628 aa11.55□□□□□ -0.56
TNFRSF9-203ENST00000492571 GRIN2DO15399 1336 aa11.55□□□□□ -0.56
TNFRSF9-203ENST00000492571 TNKSO95271 1327 aa11.55□□□□□ -0.56
TNFRSF9-203ENST00000492571 ZNFX1Q9P2E3 1918 aaKnown RBP11.54□□□□□ -0.56
TNFRSF9-203ENST00000492571 IGKV6D-41A0A0C4DH26 115 aa11.54□□□□□ -0.56
TNFRSF9-203ENST00000492571 B4DLN1 442 aa11.54□□□□□ -0.56
TNFRSF9-203ENST00000492571 PATL2C9JE40 543 aaKnown RBP11.54□□□□□ -0.56
TNFRSF9-203ENST00000492571 CYP2C9P11712 490 aa11.54□□□□□ -0.56
TNFRSF9-203ENST00000492571 MCCP23508 829 aa11.54□□□□□ -0.56
TNFRSF9-203ENST00000492571 MLLT3P42568 568 aaPredicted RBP11.54□□□□□ -0.56
TNFRSF9-203ENST00000492571 KCNJ6P48051 423 aa11.54□□□□□ -0.56
TNFRSF9-203ENST00000492571 MRPL12P52815 198 aaKnown RBP11.54□□□□□ -0.56
TNFRSF9-203ENST00000492571 HNRNPUQ00839 825 aaKnown RBP eCLIP11.54□□□□□ -0.56
TNFRSF9-203ENST00000492571 TFAP4Q01664 338 aa11.54□□□□□ -0.56
TNFRSF9-203ENST00000492571 TTLL4Q14679 1199 aa11.54□□□□□ -0.56
TNFRSF9-203ENST00000492571 DUSP28Q4G0W2 176 aa11.54□□□□□ -0.56
TNFRSF9-203ENST00000492571 TAPT1Q6NXT6 567 aa11.54□□□□□ -0.56
TNFRSF9-203ENST00000492571 FBXO16Q8IX29 292 aaPredicted RBP11.54□□□□□ -0.56
TNFRSF9-203ENST00000492571 NEDD1Q8NHV4 660 aa11.54□□□□□ -0.56
TNFRSF9-203ENST00000492571 KCNV2Q8TDN2 545 aa11.54□□□□□ -0.56
TNFRSF9-203ENST00000492571 MTG1Q9BT17 334 aaPredicted RBP11.54□□□□□ -0.56
TNFRSF9-203ENST00000492571 WDR11Q9BZH6 1224 aa11.54□□□□□ -0.56
TNFRSF9-203ENST00000492571 PDGFCQ9NRA1 345 aa11.54□□□□□ -0.56
TNFRSF9-203ENST00000492571 ECHDC1Q9NTX5 307 aa11.54□□□□□ -0.56
TNFRSF9-203ENST00000492571 TRMT13Q9NUP7 481 aaKnown RBP11.54□□□□□ -0.56
TNFRSF9-203ENST00000492571 CYP39A1Q9NYL5 469 aa11.54□□□□□ -0.56
TNFRSF9-203ENST00000492571 CCPG1Q9ULG6 757 aa11.54□□□□□ -0.56
TNFRSF9-203ENST00000492571 STX8Q9UNK0 236 aa11.54□□□□□ -0.56
TNFRSF9-203ENST00000492571 ASTN1O14525 1302 aa11.54□□□□□ -0.56
TNFRSF9-203ENST00000492571 BDP1A6H8Y1 2624 aa11.54□□□□□ -0.56
TNFRSF9-203ENST00000492571 CHD9Q3L8U1 2897 aa11.53□□□□□ -0.56
TNFRSF9-203ENST00000492571 LOC102724159A0A0B4J2E5 919 aa11.53□□□□□ -0.56
TNFRSF9-203ENST00000492571 RFXAPO00287 272 aa11.53□□□□□ -0.56
TNFRSF9-203ENST00000492571 RNF113AO15541 343 aaKnown RBP11.53□□□□□ -0.56
TNFRSF9-203ENST00000492571 GPAA1O43292 621 aa11.53□□□□□ -0.56
TNFRSF9-203ENST00000492571 TLL1O43897 1013 aa11.53□□□□□ -0.56
TNFRSF9-203ENST00000492571 PLA2G6O60733 806 aa11.53□□□□□ -0.56
TNFRSF9-203ENST00000492571 CHGBP05060 677 aa11.53□□□□□ -0.56
TNFRSF9-203ENST00000492571 PWP2Q15269 919 aaKnown RBP11.53□□□□□ -0.56
TNFRSF9-203ENST00000492571 RCSD1Q6JBY9 416 aa11.53□□□□□ -0.56
TNFRSF9-203ENST00000492571 NUDT18Q6ZVK8 323 aa11.53□□□□□ -0.56
TNFRSF9-203ENST00000492571 CCDC155Q8N6L0 562 aa11.53□□□□□ -0.56
TNFRSF9-203ENST00000492571 KBTBD3Q8NAB2 608 aa11.53□□□□□ -0.56
TNFRSF9-203ENST00000492571 NAPBQ9H115 298 aa11.53□□□□□ -0.56
TNFRSF9-203ENST00000492571 EPHX3Q9H6B9 360 aa11.53□□□□□ -0.56
TNFRSF9-203ENST00000492571 PNMA2Q9UL42 364 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms