RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 MSH2P43246 934 aa10.67□□□□□ -0.7
VPS8-225ENST00000492449 KLC1Q07866 573 aa10.67□□□□□ -0.7
VPS8-225ENST00000492449 MTMR3Q13615 1198 aa10.67□□□□□ -0.7
VPS8-225ENST00000492449 NFRKBQ6P4R8 1299 aa10.67□□□□□ -0.7
VPS8-225ENST00000492449 NCSTNQ92542 709 aa10.67□□□□□ -0.7
VPS8-225ENST00000492449 AZIN2Q96A70 460 aa10.67□□□□□ -0.7
VPS8-225ENST00000492449 OPTNQ96CV9 577 aa10.67□□□□□ -0.7
VPS8-225ENST00000492449 LZTS2Q9BRK4 669 aa10.67□□□□□ -0.7
VPS8-225ENST00000492449 MAF1Q9H063 256 aa10.67□□□□□ -0.7
VPS8-225ENST00000492449 TAOK2Q9UL54 1235 aa10.67□□□□□ -0.7
VPS8-225ENST00000492449 DUSP10Q9Y6W6 482 aa10.67□□□□□ -0.7
VPS8-225ENST00000492449 TOPAZ1Q8N9V7 1692 aa10.67□□□□□ -0.7
VPS8-225ENST00000492449 PDS5AQ29RF7 1337 aaKnown RBP10.67□□□□□ -0.7
VPS8-225ENST00000492449 IGSF1Q8N6C5 1336 aa10.67□□□□□ -0.7
VPS8-225ENST00000492449 ECHS1P30084 290 aa10.67□□□□□ -0.7
VPS8-225ENST00000492449 GUCY2FP51841 1108 aa10.67□□□□□ -0.7
VPS8-225ENST00000492449 LACTBP83111 547 aaPredicted RBP10.67□□□□□ -0.7
VPS8-225ENST00000492449 UBXN1Q04323 297 aa10.67□□□□□ -0.7
VPS8-225ENST00000492449 BNIP1Q12981 228 aa10.67□□□□□ -0.7
VPS8-225ENST00000492449 CUL1Q13616 776 aa10.67□□□□□ -0.7
VPS8-225ENST00000492449 RASA3Q14644 834 aa10.67□□□□□ -0.7
VPS8-225ENST00000492449 SPDYCQ5MJ68 293 aa10.67□□□□□ -0.7
VPS8-225ENST00000492449 KLHL10Q6JEL2 608 aa10.67□□□□□ -0.7
VPS8-225ENST00000492449 MB21D2Q8IYB1 491 aaPredicted RBP10.67□□□□□ -0.7
VPS8-225ENST00000492449 KAZALD1Q96I82 304 aa10.67□□□□□ -0.7
VPS8-225ENST00000492449 KRT23Q9C075 422 aa10.67□□□□□ -0.7
VPS8-225ENST00000492449 FAM192AQ9GZU8 254 aa10.67□□□□□ -0.7
VPS8-225ENST00000492449 IQCGQ9H095 443 aaKnown RBP10.67□□□□□ -0.7
VPS8-225ENST00000492449 VCXQ9H320 206 aa10.67□□□□□ -0.7
VPS8-225ENST00000492449 THAP9Q9H5L6 903 aa10.67□□□□□ -0.7
VPS8-225ENST00000492449 ATP8A2Q9NTI2 1148 aa10.67□□□□□ -0.7
VPS8-225ENST00000492449 TAB2Q9NYJ8 693 aa10.67□□□□□ -0.7
VPS8-225ENST00000492449 SLC4A7Q9Y6M7 1214 aa10.67□□□□□ -0.7
VPS8-225ENST00000492449 MACROD2A1Z1Q3 448 aa10.66□□□□□ -0.7
VPS8-225ENST00000492449 IGF2BP3O00425 579 aaKnown RBP eCLIP10.66□□□□□ -0.7
VPS8-225ENST00000492449 RXRBP28702 533 aa10.66□□□□□ -0.7
VPS8-225ENST00000492449 MATR3P43243 847 aaKnown RBP eCLIP10.66□□□□□ -0.7
VPS8-225ENST00000492449 PABPC4Q13310 644 aaKnown RBP eCLIP10.66□□□□□ -0.7
VPS8-225ENST00000492449 IRGCQ6NXR0 463 aa10.66□□□□□ -0.7
VPS8-225ENST00000492449 CHST3Q7LGC8 479 aa10.66□□□□□ -0.7
VPS8-225ENST00000492449 IFT81Q8WYA0 676 aa10.66□□□□□ -0.7
VPS8-225ENST00000492449 PRCCQ92733 491 aaPredicted RBP10.66□□□□□ -0.7
VPS8-225ENST00000492449 IFT74Q96LB3 600 aa10.66□□□□□ -0.7
VPS8-225ENST00000492449 CTNND2Q9UQB3 1225 aa10.66□□□□□ -0.7
VPS8-225ENST00000492449 KIF13AQ9H1H9 1805 aa10.66□□□□□ -0.7
VPS8-225ENST00000492449 NUTM2BA6NNL0 878 aaPredicted RBP10.66□□□□□ -0.7
VPS8-225ENST00000492449 NUTM2EB1AL46 878 aaPredicted RBP10.66□□□□□ -0.7
VPS8-225ENST00000492449 M0R2C6 588 aa10.66□□□□□ -0.7
VPS8-225ENST00000492449 PJA2O43164 708 aa10.66□□□□□ -0.7
VPS8-225ENST00000492449 KRT16P08779 473 aa10.66□□□□□ -0.7
VPS8-225ENST00000492449 GBP1P32455 592 aa10.66□□□□□ -0.7
VPS8-225ENST00000492449 SKIV2L2P42285 1042 aaKnown RBP10.66□□□□□ -0.7
VPS8-225ENST00000492449 INHBCP55103 352 aa10.66□□□□□ -0.7
VPS8-225ENST00000492449 MRPS25P82663 173 aaKnown RBP10.66□□□□□ -0.7
VPS8-225ENST00000492449 GRIN1Q05586 938 aa10.66□□□□□ -0.7
VPS8-225ENST00000492449 PLS1Q14651 629 aa10.66□□□□□ -0.7
VPS8-225ENST00000492449 DNAJC14Q6Y2X3 702 aaPredicted RBP10.66□□□□□ -0.7
VPS8-225ENST00000492449 FAM136AQ96C01 138 aa10.66□□□□□ -0.7
VPS8-225ENST00000492449 PAGE5Q96GU1 130 aa10.66□□□□□ -0.7
VPS8-225ENST00000492449 PBKQ96KB5 322 aa10.66□□□□□ -0.7
VPS8-225ENST00000492449 ECT2Q9H8V3 914 aa10.66□□□□□ -0.7
VPS8-225ENST00000492449 C9orf78Q9NZ63 289 aaPredicted RBP10.66□□□□□ -0.7
VPS8-225ENST00000492449 DBNLQ9UJU6 430 aaKnown RBP10.66□□□□□ -0.7
VPS8-225ENST00000492449 PHF8Q9UPP1 1060 aa10.66□□□□□ -0.7
VPS8-225ENST00000492449 EID1Q9Y6B2 187 aa10.66□□□□□ -0.7
VPS8-225ENST00000492449 STK36Q9NRP7 1315 aa10.66□□□□□ -0.7
VPS8-225ENST00000492449 DISP2A7MBM2 1401 aa10.66□□□□□ -0.7
VPS8-225ENST00000492449 A0A1W2PQJ5 194 aa10.65□□□□□ -0.7
VPS8-225ENST00000492449 TOB1P50616 345 aaPredicted RBP10.65□□□□□ -0.7
VPS8-225ENST00000492449 COPS2P61201 443 aa10.65□□□□□ -0.7
VPS8-225ENST00000492449 SH3TC2Q8TF17 1288 aa10.65□□□□□ -0.7
VPS8-225ENST00000492449 NOC3LQ8WTT2 800 aaKnown RBP10.65□□□□□ -0.7
VPS8-225ENST00000492449 ATXN2LQ8WWM7 1075 aaKnown RBP10.65□□□□□ -0.7
VPS8-225ENST00000492449 IQCDQ96DY2 449 aa10.65□□□□□ -0.7
VPS8-225ENST00000492449 FGD4Q96M96 766 aa10.65□□□□□ -0.7
VPS8-225ENST00000492449 GPHNQ9NQX3 736 aaPredicted RBP10.65□□□□□ -0.7
VPS8-225ENST00000492449 AATFQ9NY61 560 aaKnown RBP eCLIP10.65□□□□□ -0.7
VPS8-225ENST00000492449 SAMD15Q9P1V8 674 aa10.65□□□□□ -0.7
VPS8-225ENST00000492449 ZNF263O14978 683 aa10.65□□□□□ -0.7
VPS8-225ENST00000492449 HIP1RO75146 1068 aa10.65□□□□□ -0.7
VPS8-225ENST00000492449 OATP04181 439 aa10.65□□□□□ -0.7
VPS8-225ENST00000492449 HNRNPH3P31942 346 aaKnown RBP10.65□□□□□ -0.7
VPS8-225ENST00000492449 SCNN1BP51168 640 aa10.65□□□□□ -0.7
VPS8-225ENST00000492449 FIGNQ5HY92 759 aa10.65□□□□□ -0.7
VPS8-225ENST00000492449 TMEM154Q6P9G4 183 aa10.65□□□□□ -0.7
VPS8-225ENST00000492449 GIGYF2Q6Y7W6 1299 aaKnown RBP10.65□□□□□ -0.7
VPS8-225ENST00000492449 TSHZ1Q6ZSZ6 1077 aa10.65□□□□□ -0.7
VPS8-225ENST00000492449 NOSTRINQ8IVI9 506 aa10.65□□□□□ -0.7
VPS8-225ENST00000492449 ENDOVQ8N8Q3 282 aaKnown RBP10.65□□□□□ -0.7
VPS8-225ENST00000492449 LTV1Q96GA3 475 aaPredicted RBP10.65□□□□□ -0.7
VPS8-225ENST00000492449 TSPAN18Q96SJ8 248 aa10.65□□□□□ -0.7
VPS8-225ENST00000492449 TLR10Q9BXR5 811 aa10.65□□□□□ -0.7
VPS8-225ENST00000492449 TRIM7Q9C029 511 aa10.65□□□□□ -0.7
VPS8-225ENST00000492449 ZCWPW1Q9H0M4 648 aa10.65□□□□□ -0.7
VPS8-225ENST00000492449 STRN4Q9NRL3 753 aa10.65□□□□□ -0.7
VPS8-225ENST00000492449 LRWD1Q9UFC0 647 aa10.65□□□□□ -0.7
VPS8-225ENST00000492449 CIDEBQ9UHD4 219 aa10.65□□□□□ -0.7
VPS8-225ENST00000492449 A2ML1A8K2U0 1454 aa10.65□□□□□ -0.71
VPS8-225ENST00000492449 TMEM94Q12767 1356 aa10.65□□□□□ -0.71
VPS8-225ENST00000492449 A0A0G2JLW4 131 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms