RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 SLF1Q9BQI6 1058 aa14.01□□□□□ -0.17
CACNA1C-228ENST00000492150 TEX13BQ9BXU2 312 aa14.01□□□□□ -0.17
CACNA1C-228ENST00000492150 SLC4A4Q9Y6R1 1079 aa14.01□□□□□ -0.17
CACNA1C-228ENST00000492150 WDR87Q6ZQQ6 2873 aa14.01□□□□□ -0.17
CACNA1C-228ENST00000492150 MICAL3Q7RTP6 2002 aa14□□□□□ -0.17
CACNA1C-228ENST00000492150 H3BNC9 293 aa14□□□□□ -0.17
CACNA1C-228ENST00000492150 PSMC6P62333 389 aa14□□□□□ -0.17
CACNA1C-228ENST00000492150 TNFAIP2Q03169 654 aa14□□□□□ -0.17
CACNA1C-228ENST00000492150 UBE3CQ15386 1083 aa14□□□□□ -0.17
CACNA1C-228ENST00000492150 TMCO2Q7Z6W1 182 aaPredicted RBP14□□□□□ -0.17
CACNA1C-228ENST00000492150 RETREG2Q8NC44 543 aa14□□□□□ -0.17
CACNA1C-228ENST00000492150 DDX11Q96FC9 970 aa14□□□□□ -0.17
CACNA1C-228ENST00000492150 FGD4Q96M96 766 aa14□□□□□ -0.17
CACNA1C-228ENST00000492150 HAUS7Q99871 368 aa14□□□□□ -0.17
CACNA1C-228ENST00000492150 PUS7LQ9H0K6 701 aaKnown RBP14□□□□□ -0.17
CACNA1C-228ENST00000492150 BCL11AQ9H165 835 aa14□□□□□ -0.17
CACNA1C-228ENST00000492150 Q9Y3F1 56 aa14□□□□□ -0.17
CACNA1C-228ENST00000492150 GREB1LQ9C091 1923 aaPredicted RBP14□□□□□ -0.17
CACNA1C-228ENST00000492150 ANKRD11Q6UB99 2663 aaPredicted RBP13.99□□□□□ -0.17
CACNA1C-228ENST00000492150 GPR179Q6PRD1 2367 aa13.99□□□□□ -0.17
CACNA1C-228ENST00000492150 ATP2A1O14983 1001 aa13.99□□□□□ -0.17
CACNA1C-228ENST00000492150 EFCAB14O75071 495 aa13.99□□□□□ -0.17
CACNA1C-228ENST00000492150 EYA4O95677 639 aa13.99□□□□□ -0.17
CACNA1C-228ENST00000492150 RASA1P20936 1047 aa13.99□□□□□ -0.17
CACNA1C-228ENST00000492150 ICAM3P32942 547 aa13.99□□□□□ -0.17
CACNA1C-228ENST00000492150 DLX2Q07687 328 aaPredicted RBP13.99□□□□□ -0.17
CACNA1C-228ENST00000492150 BFSP2Q13515 415 aa13.99□□□□□ -0.17
CACNA1C-228ENST00000492150 EPC2Q52LR7 807 aa13.99□□□□□ -0.17
CACNA1C-228ENST00000492150 ARMCX2Q7L311 632 aa13.99□□□□□ -0.17
CACNA1C-228ENST00000492150 RPAP2Q8IXW5 612 aaPredicted RBP13.99□□□□□ -0.17
CACNA1C-228ENST00000492150 SP7Q8TDD2 431 aaPredicted RBP13.99□□□□□ -0.17
CACNA1C-228ENST00000492150 CRBNQ96SW2 442 aa13.99□□□□□ -0.17
CACNA1C-228ENST00000492150 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.99□□□□□ -0.17
CACNA1C-228ENST00000492150 NYAP2Q9P242 653 aa13.99□□□□□ -0.17
CACNA1C-228ENST00000492150 CD207Q9UJ71 328 aa13.99□□□□□ -0.17
CACNA1C-228ENST00000492150 INSL6Q9Y581 213 aa13.99□□□□□ -0.17
CACNA1C-228ENST00000492150 SPTBN2O15020 2390 aa13.98□□□□□ -0.17
CACNA1C-228ENST00000492150 ABHD14A-ACY1A0A1B0GW23 586 aa13.98□□□□□ -0.17
CACNA1C-228ENST00000492150 F5H6K3 240 aa13.98□□□□□ -0.17
CACNA1C-228ENST00000492150 RAB11FIP3O75154 756 aa13.98□□□□□ -0.17
CACNA1C-228ENST00000492150 NDUFB10O96000 172 aa13.98□□□□□ -0.17
CACNA1C-228ENST00000492150 KLRC3Q07444 240 aa13.98□□□□□ -0.17
CACNA1C-228ENST00000492150 CLUL1Q15846 466 aa13.98□□□□□ -0.17
CACNA1C-228ENST00000492150 CNKSR3Q6P9H4 555 aa13.98□□□□□ -0.17
CACNA1C-228ENST00000492150 PRPF38AQ8NAV1 312 aaKnown RBP13.98□□□□□ -0.17
CACNA1C-228ENST00000492150 DDRGK1Q96HY6 314 aa13.98□□□□□ -0.17
CACNA1C-228ENST00000492150 SEMA4AQ9H3S1 761 aa13.98□□□□□ -0.17
CACNA1C-228ENST00000492150 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.97□□□□□ -0.17
CACNA1C-228ENST00000492150 ZBED4O75132 1171 aa13.97□□□□□ -0.17
CACNA1C-228ENST00000492150 TBX10O75333 385 aa13.97□□□□□ -0.17
CACNA1C-228ENST00000492150 PARNO95453 639 aaKnown RBP13.97□□□□□ -0.17
CACNA1C-228ENST00000492150 SLC4A3P48751 1232 aa13.97□□□□□ -0.17
CACNA1C-228ENST00000492150 GPM6BQ13491 265 aa13.97□□□□□ -0.17
CACNA1C-228ENST00000492150 SBK1Q52WX2 424 aa13.97□□□□□ -0.17
CACNA1C-228ENST00000492150 CPXCR1Q8N123 301 aa13.97□□□□□ -0.17
CACNA1C-228ENST00000492150 AP5M1Q9H0R1 490 aa13.97□□□□□ -0.17
CACNA1C-228ENST00000492150 RAVER2Q9HCJ3 691 aaKnown RBP13.97□□□□□ -0.17
CACNA1C-228ENST00000492150 ARPP21Q9UBL0 812 aaPredicted RBP13.97□□□□□ -0.17
CACNA1C-228ENST00000492150 IGKV6D-41A0A0C4DH26 115 aa13.96□□□□□ -0.17
CACNA1C-228ENST00000492150 GSG1L2A8MUP6 293 aa13.96□□□□□ -0.17
CACNA1C-228ENST00000492150 HMMRO75330 724 aa13.96□□□□□ -0.17
CACNA1C-228ENST00000492150 CXCL10P02778 98 aa13.96□□□□□ -0.17
CACNA1C-228ENST00000492150 HTRA4P83105 476 aaPredicted RBP13.96□□□□□ -0.17
CACNA1C-228ENST00000492150 PTPN21Q16825 1174 aa13.96□□□□□ -0.17
CACNA1C-228ENST00000492150 STK11IPQ8N1F8 1099 aa13.96□□□□□ -0.17
CACNA1C-228ENST00000492150 TMEM105Q8N8V8 129 aa13.96□□□□□ -0.17
CACNA1C-228ENST00000492150 MSLNLQ96KJ4 702 aa13.96□□□□□ -0.17
CACNA1C-228ENST00000492150 STRBPQ96SI9 672 aaKnown RBP13.96□□□□□ -0.17
CACNA1C-228ENST00000492150 SLC38A10Q9HBR0 1119 aa13.96□□□□□ -0.17
CACNA1C-228ENST00000492150 ZBTB40Q9NUA8 1239 aa13.96□□□□□ -0.17
CACNA1C-228ENST00000492150 CLIP2Q9UDT6 1046 aa13.96□□□□□ -0.17
CACNA1C-228ENST00000492150 OTOGLQ3ZCN5 2332 aa13.95□□□□□ -0.18
CACNA1C-228ENST00000492150 PDGFBP01127 241 aaPredicted RBP13.95□□□□□ -0.18
CACNA1C-228ENST00000492150 HNRNPUQ00839 825 aaKnown RBP eCLIP13.95□□□□□ -0.18
CACNA1C-228ENST00000492150 HYAL1Q12794 435 aa13.95□□□□□ -0.18
CACNA1C-228ENST00000492150 GPNMBQ14956 572 aa13.95□□□□□ -0.18
CACNA1C-228ENST00000492150 ZSCAN25Q6NSZ9 544 aa13.95□□□□□ -0.18
CACNA1C-228ENST00000492150 NOL8Q76FK4 1167 aaKnown RBP13.95□□□□□ -0.18
CACNA1C-228ENST00000492150 CCDC144CPQ8IYA2 1237 aa13.95□□□□□ -0.18
CACNA1C-228ENST00000492150 KIAA2013Q8IYS2 634 aa13.95□□□□□ -0.18
CACNA1C-228ENST00000492150 ANKRD35Q8N283 1001 aa13.95□□□□□ -0.18
CACNA1C-228ENST00000492150 CAGE1Q8TC20 777 aa13.95□□□□□ -0.18
CACNA1C-228ENST00000492150 AFAP1L1Q8TED9 768 aa13.95□□□□□ -0.18
CACNA1C-228ENST00000492150 MKL1Q969V6 931 aa13.95□□□□□ -0.18
CACNA1C-228ENST00000492150 KIFC2Q96AC6 838 aa13.95□□□□□ -0.18
CACNA1C-228ENST00000492150 MKNK2Q9HBH9 465 aa13.95□□□□□ -0.18
CACNA1C-228ENST00000492150 MYH7P12883 1935 aa13.95□□□□□ -0.18
CACNA1C-228ENST00000492150 CNTN2Q02246 1040 aa13.94□□□□□ -0.18
CACNA1C-228ENST00000492150 PTPN11Q06124 597 aaPredicted RBP13.94□□□□□ -0.18
CACNA1C-228ENST00000492150 NFRKBQ6P4R8 1299 aa13.94□□□□□ -0.18
CACNA1C-228ENST00000492150 GIMAP6Q6P9H5 292 aa13.94□□□□□ -0.18
CACNA1C-228ENST00000492150 SMRP1Q8NCR6 262 aa13.94□□□□□ -0.18
CACNA1C-228ENST00000492150 CHST13Q8NET6 341 aa13.94□□□□□ -0.18
CACNA1C-228ENST00000492150 PHF7Q9BWX1 381 aaPredicted RBP13.94□□□□□ -0.18
CACNA1C-228ENST00000492150 LMAN2LQ9H0V9 348 aa13.94□□□□□ -0.18
CACNA1C-228ENST00000492150 POLR3EQ9NVU0 708 aa13.94□□□□□ -0.18
CACNA1C-228ENST00000492150 FBXO40Q9UH90 709 aa13.94□□□□□ -0.18
CACNA1C-228ENST00000492150 FEM1BQ9UK73 627 aa13.94□□□□□ -0.18
CACNA1C-228ENST00000492150 CTDP1Q9Y5B0 961 aaPredicted RBP13.94□□□□□ -0.18
CACNA1C-228ENST00000492150 MINDY4BA8MYZ0 360 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms