RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 CXCL17Q6UXB2 119 aa31.46■■■□□ 2.63
SH3GL3-204ENST00000492099 NFXL1Q6ZNB6 911 aa31.46■■■□□ 2.63
SH3GL3-204ENST00000492099 COL20A1Q9P218 1284 aa31.46■■■□□ 2.63
SH3GL3-204ENST00000492099 MYH6P13533 1939 aa31.45■■■□□ 2.63
SH3GL3-204ENST00000492099 PNMA6FA0A0J9YX94 578 aa31.45■■■□□ 2.63
SH3GL3-204ENST00000492099 SH2B2O14492 632 aaPredicted RBP31.45■■■□□ 2.63
SH3GL3-204ENST00000492099 CYTH3O43739 400 aa31.45■■■□□ 2.63
SH3GL3-204ENST00000492099 LIFRP42702 1097 aa31.45■■■□□ 2.63
SH3GL3-204ENST00000492099 HSD17B4P51659 736 aa31.45■■■□□ 2.63
SH3GL3-204ENST00000492099 SEZ6LQ9BYH1 1024 aa31.45■■■□□ 2.63
SH3GL3-204ENST00000492099 GPHNQ9NQX3 736 aaPredicted RBP31.45■■■□□ 2.63
SH3GL3-204ENST00000492099 CCDC69A6NI79 296 aa31.44■■■□□ 2.62
SH3GL3-204ENST00000492099 SOX1O00570 391 aaPredicted RBP31.44■■■□□ 2.62
SH3GL3-204ENST00000492099 OPLAHO14841 1288 aa31.44■■■□□ 2.62
SH3GL3-204ENST00000492099 RAG1P15918 1043 aa31.44■■■□□ 2.62
SH3GL3-204ENST00000492099 STXBP2Q15833 593 aa31.44■■■□□ 2.62
SH3GL3-204ENST00000492099 ARHGEF16Q5VV41 709 aa31.44■■■□□ 2.62
SH3GL3-204ENST00000492099 LTBP2Q14767 1821 aa31.43■■■□□ 2.62
SH3GL3-204ENST00000492099 SMARCA1P28370 1054 aa31.43■■■□□ 2.62
SH3GL3-204ENST00000492099 CPT1AP50416 773 aa31.43■■■□□ 2.62
SH3GL3-204ENST00000492099 TTLL4Q14679 1199 aa31.43■■■□□ 2.62
SH3GL3-204ENST00000492099 BRDTQ58F21 947 aaPredicted RBP31.43■■■□□ 2.62
SH3GL3-204ENST00000492099 OR6J1Q8NGC5 347 aa31.43■■■□□ 2.62
SH3GL3-204ENST00000492099 LZTS2Q9BRK4 669 aa31.43■■■□□ 2.62
SH3GL3-204ENST00000492099 TLR3O15455 904 aaKnown RBP31.42■■■□□ 2.62
SH3GL3-204ENST00000492099 CALM1P0DP23 149 aa31.42■■■□□ 2.62
SH3GL3-204ENST00000492099 CALM2P0DP24 149 aa31.42■■■□□ 2.62
SH3GL3-204ENST00000492099 CALM3P0DP25 149 aa31.42■■■□□ 2.62
SH3GL3-204ENST00000492099 TXNP10599 105 aaKnown RBP31.42■■■□□ 2.62
SH3GL3-204ENST00000492099 GNAQP50148 359 aa31.42■■■□□ 2.62
SH3GL3-204ENST00000492099 SLC43A3Q8NBI5 491 aa31.42■■■□□ 2.62
SH3GL3-204ENST00000492099 LRCH3Q96II8 777 aa31.42■■■□□ 2.62
SH3GL3-204ENST00000492099 MYL10Q9BUA6 226 aa31.42■■■□□ 2.62
SH3GL3-204ENST00000492099 SPZ1Q9BXG8 430 aa31.42■■■□□ 2.62
SH3GL3-204ENST00000492099 POLR3EQ9NVU0 708 aa31.42■■■□□ 2.62
SH3GL3-204ENST00000492099 ITGB8P26012 769 aa31.41■■■□□ 2.62
SH3GL3-204ENST00000492099 ITGA7Q13683 1181 aa31.41■■■□□ 2.62
SH3GL3-204ENST00000492099 PXMP2Q9NR77 195 aa31.41■■■□□ 2.62
SH3GL3-204ENST00000492099 LAMA3Q16787 3333 aa31.4■■■□□ 2.62
SH3GL3-204ENST00000492099 EIF2AK2P19525 551 aaKnown RBP31.4■■■□□ 2.62
SH3GL3-204ENST00000492099 TSGA10IPQ3SY00 556 aa31.4■■■□□ 2.62
SH3GL3-204ENST00000492099 GPR153Q6NV75 609 aa31.4■■■□□ 2.62
SH3GL3-204ENST00000492099 FAM126BQ8IXS8 530 aa31.4■■■□□ 2.62
SH3GL3-204ENST00000492099 NEK1Q96PY6 1258 aa31.4■■■□□ 2.62
SH3GL3-204ENST00000492099 TBX21Q9UL17 535 aa31.4■■■□□ 2.62
SH3GL3-204ENST00000492099 GCOM1H8Y6P7 765 aaPredicted RBP31.39■■■□□ 2.62
SH3GL3-204ENST00000492099 EIF3JO75822 258 aaKnown RBP31.39■■■□□ 2.62
SH3GL3-204ENST00000492099 NR3C2P08235 984 aa31.39■■■□□ 2.62
SH3GL3-204ENST00000492099 POLR2MP0CAP2 368 aa31.39■■■□□ 2.62
SH3GL3-204ENST00000492099 COL9A3Q14050 684 aaPredicted RBP31.39■■■□□ 2.62
SH3GL3-204ENST00000492099 RRP36Q96EU6 259 aaKnown RBP31.39■■■□□ 2.62
SH3GL3-204ENST00000492099 SLC12A7Q9Y666 1083 aa31.39■■■□□ 2.62
SH3GL3-204ENST00000492099 TIMP1P01033 207 aa31.38■■■□□ 2.61
SH3GL3-204ENST00000492099 KRT32Q14532 448 aa31.38■■■□□ 2.61
SH3GL3-204ENST00000492099 CCDC62Q6P9F0 684 aa31.38■■■□□ 2.61
SH3GL3-204ENST00000492099 SEPT14Q6ZU15 432 aa31.38■■■□□ 2.61
SH3GL3-204ENST00000492099 BAZ2BQ9UIF8 2168 aaKnown RBP31.37■■■□□ 2.61
SH3GL3-204ENST00000492099 KPNA6O60684 536 aa31.37■■■□□ 2.61
SH3GL3-204ENST00000492099 SGMS1Q86VZ5 419 aa31.37■■■□□ 2.61
SH3GL3-204ENST00000492099 COPS5Q92905 334 aa31.37■■■□□ 2.61
SH3GL3-204ENST00000492099 LRRC2Q9BYS8 371 aa31.37■■■□□ 2.61
SH3GL3-204ENST00000492099 GRIN2DO15399 1336 aa31.36■■■□□ 2.61
SH3GL3-204ENST00000492099 A6NJR5 290 aa31.36■■■□□ 2.61
SH3GL3-204ENST00000492099 ARIH2O95376 493 aa31.36■■■□□ 2.61
SH3GL3-204ENST00000492099 CD4P01730 458 aa31.36■■■□□ 2.61
SH3GL3-204ENST00000492099 HOXA13P31271 388 aaPredicted RBP31.36■■■□□ 2.61
SH3GL3-204ENST00000492099 PURAQ00577 322 aaKnown RBP31.36■■■□□ 2.61
SH3GL3-204ENST00000492099 PIBF1Q8WXW3 757 aa31.36■■■□□ 2.61
SH3GL3-204ENST00000492099 PDCD2LQ9BRP1 358 aa31.36■■■□□ 2.61
SH3GL3-204ENST00000492099 SEC63Q9UGP8 760 aaKnown RBP31.36■■■□□ 2.61
SH3GL3-204ENST00000492099 SZT2Q5T011 3432 aa31.36■■■□□ 2.61
SH3GL3-204ENST00000492099 MYL3P08590 195 aa31.35■■■□□ 2.61
SH3GL3-204ENST00000492099 PSMC6P62333 389 aa31.35■■■□□ 2.61
SH3GL3-204ENST00000492099 FPGSQ05932 587 aa31.35■■■□□ 2.61
SH3GL3-204ENST00000492099 SHHQ15465 462 aa31.35■■■□□ 2.61
SH3GL3-204ENST00000492099 SYNE3Q6ZMZ3 975 aa31.35■■■□□ 2.61
SH3GL3-204ENST00000492099 DHX32Q7L7V1 743 aaKnown RBP31.35■■■□□ 2.61
SH3GL3-204ENST00000492099 RASEFQ8IZ41 740 aa31.35■■■□□ 2.61
SH3GL3-204ENST00000492099 MTG1Q9BT17 334 aaPredicted RBP31.35■■■□□ 2.61
SH3GL3-204ENST00000492099 SRBD1Q8N5C6 995 aaKnown RBP31.34■■■□□ 2.61
SH3GL3-204ENST00000492099 FANCBQ8NB91 859 aa31.34■■■□□ 2.61
SH3GL3-204ENST00000492099 PLEKHA8P1O95397 391 aa31.33■■■□□ 2.61
SH3GL3-204ENST00000492099 GH1P01241 217 aa31.33■■■□□ 2.61
SH3GL3-204ENST00000492099 RXRAP19793 462 aa31.33■■■□□ 2.61
SH3GL3-204ENST00000492099 EXOSC10Q01780 885 aaKnown RBP31.33■■■□□ 2.61
SH3GL3-204ENST00000492099 LY6KQ17RY6 165 aa31.33■■■□□ 2.61
SH3GL3-204ENST00000492099 MFSD5Q6N075 450 aa31.33■■■□□ 2.61
SH3GL3-204ENST00000492099 VSIG10LQ86VR7 867 aa31.33■■■□□ 2.61
SH3GL3-204ENST00000492099 HMGB1P09429 215 aaKnown RBP31.32■■■□□ 2.6
SH3GL3-204ENST00000492099 MYCLP12524 364 aaPredicted RBP31.32■■■□□ 2.6
SH3GL3-204ENST00000492099 PGM5Q15124 567 aa31.32■■■□□ 2.6
SH3GL3-204ENST00000492099 C9orf50Q5SZB4 431 aa31.32■■■□□ 2.6
SH3GL3-204ENST00000492099 FCHSD1Q86WN1 690 aa31.32■■■□□ 2.6
SH3GL3-204ENST00000492099 DDX41Q9UJV9 622 aaKnown RBP31.32■■■□□ 2.6
SH3GL3-204ENST00000492099 ADCK5Q3MIX3 580 aa31.31■■■□□ 2.6
SH3GL3-204ENST00000492099 KCNV1Q6PIU1 500 aa31.31■■■□□ 2.6
SH3GL3-204ENST00000492099 MRVI1Q9Y6F6 885 aa31.31■■■□□ 2.6
SH3GL3-204ENST00000492099 CCND2P30279 289 aa31.3■■■□□ 2.6
SH3GL3-204ENST00000492099 MICU3Q86XE3 530 aa31.3■■■□□ 2.6
SH3GL3-204ENST00000492099 TMEM199Q8N511 208 aa31.3■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms