RNA–Protein interactions for RNA: ENST00000491680.6

LCLAT1-211, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2

Gene LCLAT1, Length 1,610 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-211ENST00000491680 CT47A1Q5JQC4 288 aaPredicted RBP13.02□□□□□ -0.33
LCLAT1-211ENST00000491680 ANKRD13CQ8N6S4 541 aa13.02□□□□□ -0.33
LCLAT1-211ENST00000491680 C12orf42Q96LP6 360 aa13.02□□□□□ -0.33
LCLAT1-211ENST00000491680 FTOQ9C0B1 505 aaKnown RBP eCLIP13.02□□□□□ -0.33
LCLAT1-211ENST00000491680 KANSL2Q9H9L4 492 aa13.02□□□□□ -0.33
LCLAT1-211ENST00000491680 PTPN22Q9Y2R2 807 aa13.02□□□□□ -0.33
LCLAT1-211ENST00000491680 hCG_1642624A0A1W2PR95 340 aa13.01□□□□□ -0.33
LCLAT1-211ENST00000491680 KIF28PB7ZC32 967 aa13.01□□□□□ -0.33
LCLAT1-211ENST00000491680 USP17L15C9J2P7 530 aa13.01□□□□□ -0.33
LCLAT1-211ENST00000491680 USP17L13C9JLJ4 530 aa13.01□□□□□ -0.33
LCLAT1-211ENST00000491680 USP17L11C9JVI0 530 aa13.01□□□□□ -0.33
LCLAT1-211ENST00000491680 USP17L18D6R9N7 530 aa13.01□□□□□ -0.33
LCLAT1-211ENST00000491680 USP17L22D6RA61 530 aa13.01□□□□□ -0.33
LCLAT1-211ENST00000491680 USP17L17D6RBQ6 530 aa13.01□□□□□ -0.33
LCLAT1-211ENST00000491680 USP17L19D6RCP7 530 aa13.01□□□□□ -0.33
LCLAT1-211ENST00000491680 USP17L20D6RJB6 530 aa13.01□□□□□ -0.33
LCLAT1-211ENST00000491680 CYTH3O43739 400 aa13.01□□□□□ -0.33
LCLAT1-211ENST00000491680 GNRH1P01148 92 aa13.01□□□□□ -0.33
LCLAT1-211ENST00000491680 EEF2P13639 858 aaKnown RBP13.01□□□□□ -0.33
LCLAT1-211ENST00000491680 HOXD10P28358 340 aa13.01□□□□□ -0.33
LCLAT1-211ENST00000491680 GNAQP50148 359 aa13.01□□□□□ -0.33
LCLAT1-211ENST00000491680 FCGRTP55899 365 aa13.01□□□□□ -0.33
LCLAT1-211ENST00000491680 DMTNQ08495 405 aa13.01□□□□□ -0.33
LCLAT1-211ENST00000491680 USP17L24Q0WX57 530 aa13.01□□□□□ -0.33
LCLAT1-211ENST00000491680 FCHSD1Q86WN1 690 aa13.01□□□□□ -0.33
LCLAT1-211ENST00000491680 MTMR7Q9Y216 660 aa13.01□□□□□ -0.33
LCLAT1-211ENST00000491680 MYH4Q9Y623 1939 aa13□□□□□ -0.33
LCLAT1-211ENST00000491680 PARP1P09874 1014 aaKnown RBP13□□□□□ -0.33
LCLAT1-211ENST00000491680 GOLGA8HP0CJ92 632 aa13□□□□□ -0.33
LCLAT1-211ENST00000491680 VCAM1P19320 739 aa13□□□□□ -0.33
LCLAT1-211ENST00000491680 CAP1Q01518 475 aa13□□□□□ -0.33
LCLAT1-211ENST00000491680 TRIM29Q14134 588 aa13□□□□□ -0.33
LCLAT1-211ENST00000491680 FAM110CQ1W6H9 321 aa13□□□□□ -0.33
LCLAT1-211ENST00000491680 P2RX7Q99572 595 aaKnown RBP13□□□□□ -0.33
LCLAT1-211ENST00000491680 LZTS2Q9BRK4 669 aa13□□□□□ -0.33
LCLAT1-211ENST00000491680 A0A1W2PRG0 241 aa12.99□□□□□ -0.33
LCLAT1-211ENST00000491680 RAD21O60216 631 aa12.99□□□□□ -0.33
LCLAT1-211ENST00000491680 PFKFB1P16118 471 aa12.99□□□□□ -0.33
LCLAT1-211ENST00000491680 SFPQP23246 707 aaKnown RBP eCLIP12.99□□□□□ -0.33
LCLAT1-211ENST00000491680 SYKP43405 635 aa12.99□□□□□ -0.33
LCLAT1-211ENST00000491680 HERVK_113P62684 666 aa12.99□□□□□ -0.33
LCLAT1-211ENST00000491680 PFKFB3Q16875 520 aaPredicted RBP12.99□□□□□ -0.33
LCLAT1-211ENST00000491680 RESP18Q5W5W9 173 aa12.99□□□□□ -0.33
LCLAT1-211ENST00000491680 GTF3C2Q8WUA4 911 aaPredicted RBP12.99□□□□□ -0.33
LCLAT1-211ENST00000491680 TRIM47Q96LD4 638 aa12.99□□□□□ -0.33
LCLAT1-211ENST00000491680 SPZ1Q9BXG8 430 aa12.99□□□□□ -0.33
LCLAT1-211ENST00000491680 CPVLQ9H3G5 476 aa12.99□□□□□ -0.33
LCLAT1-211ENST00000491680 RPAP3Q9H6T3 665 aaPredicted RBP12.99□□□□□ -0.33
LCLAT1-211ENST00000491680 L2HGDHQ9H9P8 463 aa12.99□□□□□ -0.33
LCLAT1-211ENST00000491680 TMX2Q9Y320 296 aa12.99□□□□□ -0.33
LCLAT1-211ENST00000491680 PDE4DIPQ5VU43 2346 aa12.99□□□□□ -0.33
LCLAT1-211ENST00000491680 MYPNQ86TC9 1320 aa12.99□□□□□ -0.33
LCLAT1-211ENST00000491680 KLRF2D3W0D1 207 aa12.99□□□□□ -0.33
LCLAT1-211ENST00000491680 TNPO2O14787 897 aaKnown RBP12.99□□□□□ -0.33
LCLAT1-211ENST00000491680 MMP1P03956 469 aa12.99□□□□□ -0.33
LCLAT1-211ENST00000491680 SMARCA1P28370 1054 aa12.99□□□□□ -0.33
LCLAT1-211ENST00000491680 PRMT2P55345 433 aa12.99□□□□□ -0.33
LCLAT1-211ENST00000491680 AKAP17AQ02040 695 aaKnown RBP12.99□□□□□ -0.33
LCLAT1-211ENST00000491680 ZNF543Q08ER8 600 aa12.99□□□□□ -0.33
LCLAT1-211ENST00000491680 NCAPHQ15003 741 aa12.99□□□□□ -0.33
LCLAT1-211ENST00000491680 PTPAQ15257 358 aa12.99□□□□□ -0.33
LCLAT1-211ENST00000491680 ASPRV1Q53RT3 343 aa12.99□□□□□ -0.33
LCLAT1-211ENST00000491680 KANK3Q6NY19 840 aa12.99□□□□□ -0.33
LCLAT1-211ENST00000491680 CATSPERGQ6ZRH7 1159 aa12.99□□□□□ -0.33
LCLAT1-211ENST00000491680 FILIP1Q7Z7B0 1213 aa12.99□□□□□ -0.33
LCLAT1-211ENST00000491680 ZNF579Q8NAF0 562 aaKnown RBP12.99□□□□□ -0.33
LCLAT1-211ENST00000491680 TSC1Q92574 1164 aa12.99□□□□□ -0.33
LCLAT1-211ENST00000491680 PAGR1Q9BTK6 254 aa12.99□□□□□ -0.33
LCLAT1-211ENST00000491680 TANGO6Q9C0B7 1094 aa12.99□□□□□ -0.33
LCLAT1-211ENST00000491680 VCPKMTQ9H867 229 aa12.99□□□□□ -0.33
LCLAT1-211ENST00000491680 KCNJ14Q9UNX9 436 aa12.99□□□□□ -0.33
LCLAT1-211ENST00000491680 PTCH2Q9Y6C5 1203 aa12.99□□□□□ -0.33
LCLAT1-211ENST00000491680 FRMPD2Q68DX3 1309 aaPredicted RBP12.98□□□□□ -0.33
LCLAT1-211ENST00000491680 KIF20AO95235 890 aa12.98□□□□□ -0.33
LCLAT1-211ENST00000491680 SLU7O95391 586 aaKnown RBP12.98□□□□□ -0.33
LCLAT1-211ENST00000491680 SCG2P13521 617 aa12.98□□□□□ -0.33
LCLAT1-211ENST00000491680 ZSCAN20P17040 1043 aaPredicted RBP12.98□□□□□ -0.33
LCLAT1-211ENST00000491680 CTGFP29279 349 aa12.98□□□□□ -0.33
LCLAT1-211ENST00000491680 MYL5Q02045 173 aa12.98□□□□□ -0.33
LCLAT1-211ENST00000491680 NPY5RQ15761 445 aa12.98□□□□□ -0.33
LCLAT1-211ENST00000491680 DPCR1Q3MIW9 517 aa12.98□□□□□ -0.33
LCLAT1-211ENST00000491680 ZNF397Q8NF99 534 aaPredicted RBP12.98□□□□□ -0.33
LCLAT1-211ENST00000491680 LPAR1Q92633 364 aa12.98□□□□□ -0.33
LCLAT1-211ENST00000491680 SRRTQ9BXP5 876 aaKnown RBP12.98□□□□□ -0.33
LCLAT1-211ENST00000491680 XPO4Q9C0E2 1151 aaKnown RBP12.98□□□□□ -0.33
LCLAT1-211ENST00000491680 RIOX1Q9H6W3 641 aa12.98□□□□□ -0.33
LCLAT1-211ENST00000491680 GOPCQ9HD26 462 aa12.98□□□□□ -0.33
LCLAT1-211ENST00000491680 VPS54Q9P1Q0 977 aa12.98□□□□□ -0.33
LCLAT1-211ENST00000491680 SRRDQ9UH36 339 aa12.98□□□□□ -0.33
LCLAT1-211ENST00000491680 TNRC18O15417 2968 aaPredicted RBP12.97□□□□□ -0.33
LCLAT1-211ENST00000491680 GABPB1Q06547 395 aaPredicted RBP12.97□□□□□ -0.33
LCLAT1-211ENST00000491680 SAFBQ15424 915 aaKnown RBP eCLIP12.97□□□□□ -0.33
LCLAT1-211ENST00000491680 SLC9C1Q4G0N8 1177 aa12.97□□□□□ -0.33
LCLAT1-211ENST00000491680 PRPF38BQ5VTL8 546 aaKnown RBP12.97□□□□□ -0.33
LCLAT1-211ENST00000491680 IFNLR1Q8IU57 520 aaPredicted RBP12.97□□□□□ -0.33
LCLAT1-211ENST00000491680 SPICE1Q8N0Z3 855 aa12.97□□□□□ -0.33
LCLAT1-211ENST00000491680 TRIML1Q8N9V2 468 aa12.97□□□□□ -0.33
LCLAT1-211ENST00000491680 GMCL1P1Q8NEA9 526 aa12.97□□□□□ -0.33
LCLAT1-211ENST00000491680 GPRC5AQ8NFJ5 357 aa12.97□□□□□ -0.33
LCLAT1-211ENST00000491680 RAET1EQ8TD07 263 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms