RNA–Protein interactions for RNA: ENST00000491467.1

SRGAP3-210, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-210ENST00000491467 GRIN2CQ14957 1233 aa13.54□□□□□ -0.24
SRGAP3-210ENST00000491467 SHHQ15465 462 aa13.54□□□□□ -0.24
SRGAP3-210ENST00000491467 DACT2Q5SW24 774 aa13.54□□□□□ -0.24
SRGAP3-210ENST00000491467 KRT25Q7Z3Z0 450 aa13.54□□□□□ -0.24
SRGAP3-210ENST00000491467 DRC7Q8IY82 874 aa13.54□□□□□ -0.24
SRGAP3-210ENST00000491467 MLKLQ8NB16 471 aa13.54□□□□□ -0.24
SRGAP3-210ENST00000491467 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.54□□□□□ -0.24
SRGAP3-210ENST00000491467 CSRNP2Q9H175 543 aa13.54□□□□□ -0.24
SRGAP3-210ENST00000491467 ZCCHC17Q9NP64 241 aaKnown RBP13.54□□□□□ -0.24
SRGAP3-210ENST00000491467 IMPACTQ9P2X3 320 aa13.54□□□□□ -0.24
SRGAP3-210ENST00000491467 SEC63Q9UGP8 760 aaKnown RBP13.54□□□□□ -0.24
SRGAP3-210ENST00000491467 PPP2R3BQ9Y5P8 575 aa13.54□□□□□ -0.24
SRGAP3-210ENST00000491467 STXBP3O00186 592 aa13.53□□□□□ -0.24
SRGAP3-210ENST00000491467 POLR2DO15514 142 aaKnown RBP13.53□□□□□ -0.24
SRGAP3-210ENST00000491467 CYTH3O43739 400 aa13.53□□□□□ -0.24
SRGAP3-210ENST00000491467 ENTPD3O75355 529 aa13.53□□□□□ -0.24
SRGAP3-210ENST00000491467 SLFN14P0C7P3 912 aa13.53□□□□□ -0.24
SRGAP3-210ENST00000491467 CETPP11597 493 aa13.53□□□□□ -0.24
SRGAP3-210ENST00000491467 PRPHP41219 470 aa13.53□□□□□ -0.24
SRGAP3-210ENST00000491467 SARSP49591 514 aaKnown RBP13.53□□□□□ -0.24
SRGAP3-210ENST00000491467 PTGDRQ13258 359 aa13.53□□□□□ -0.24
SRGAP3-210ENST00000491467 POSTNQ15063 836 aa13.53□□□□□ -0.24
SRGAP3-210ENST00000491467 GPATCH4Q5T3I0 446 aaKnown RBP13.53□□□□□ -0.24
SRGAP3-210ENST00000491467 PIK3AP1Q6ZUJ8 805 aa13.53□□□□□ -0.24
SRGAP3-210ENST00000491467 METTL16Q86W50 562 aaKnown RBP13.53□□□□□ -0.24
SRGAP3-210ENST00000491467 AOPEPQ8N6M6 819 aa13.53□□□□□ -0.24
SRGAP3-210ENST00000491467 SPATA20Q8TB22 786 aa13.53□□□□□ -0.24
SRGAP3-210ENST00000491467 SMARCE1Q969G3 411 aa13.53□□□□□ -0.24
SRGAP3-210ENST00000491467 PI4KBQ9UBF8 816 aa13.53□□□□□ -0.24
SRGAP3-210ENST00000491467 hCG_1642624A0A1W2PR95 340 aa13.52□□□□□ -0.25
SRGAP3-210ENST00000491467 F8W031 263 aaPredicted RBP13.52□□□□□ -0.25
SRGAP3-210ENST00000491467 ATP2B1P20020 1258 aa13.52□□□□□ -0.25
SRGAP3-210ENST00000491467 TXLNAP40222 546 aa13.52□□□□□ -0.25
SRGAP3-210ENST00000491467 MMP14P50281 582 aa13.52□□□□□ -0.25
SRGAP3-210ENST00000491467 PICALMQ13492 652 aa13.52□□□□□ -0.25
SRGAP3-210ENST00000491467 ZNF174Q15697 407 aa13.52□□□□□ -0.25
SRGAP3-210ENST00000491467 WWC2Q6AWC2 1192 aa13.52□□□□□ -0.25
SRGAP3-210ENST00000491467 PPP1R18Q6NYC8 613 aa13.52□□□□□ -0.25
SRGAP3-210ENST00000491467 IQUBQ8NA54 791 aa13.52□□□□□ -0.25
SRGAP3-210ENST00000491467 PXYLP1Q8TE99 480 aa13.52□□□□□ -0.25
SRGAP3-210ENST00000491467 PIBF1Q8WXW3 757 aa13.52□□□□□ -0.25
SRGAP3-210ENST00000491467 MKL1Q969V6 931 aa13.52□□□□□ -0.25
SRGAP3-210ENST00000491467 GSDMAQ96QA5 445 aa13.52□□□□□ -0.25
SRGAP3-210ENST00000491467 GLT8D2Q9H1C3 349 aa13.52□□□□□ -0.25
SRGAP3-210ENST00000491467 DDX4Q9NQI0 724 aaKnown RBP13.52□□□□□ -0.25
SRGAP3-210ENST00000491467 NYAP2Q9P242 653 aa13.52□□□□□ -0.25
SRGAP3-210ENST00000491467 CLIP2Q9UDT6 1046 aa13.52□□□□□ -0.25
SRGAP3-210ENST00000491467 SERTAD1Q9UHV2 236 aa13.52□□□□□ -0.25
SRGAP3-210ENST00000491467 SYNPO2Q9UMS6 1093 aa13.52□□□□□ -0.25
SRGAP3-210ENST00000491467 PCDHA5Q9Y5H7 936 aa13.52□□□□□ -0.25
SRGAP3-210ENST00000491467 CBFA2T2O43439 604 aa13.51□□□□□ -0.25
SRGAP3-210ENST00000491467 ACTN4O43707 911 aaKnown RBP13.51□□□□□ -0.25
SRGAP3-210ENST00000491467 PDHBP11177 359 aa13.51□□□□□ -0.25
SRGAP3-210ENST00000491467 ERCC5P28715 1186 aaPredicted RBP13.51□□□□□ -0.25
SRGAP3-210ENST00000491467 SHMT1P34896 483 aa13.51□□□□□ -0.25
SRGAP3-210ENST00000491467 FLT3LGP49771 235 aa13.51□□□□□ -0.25
SRGAP3-210ENST00000491467 GSDMDP57764 484 aa13.51□□□□□ -0.25
SRGAP3-210ENST00000491467 PNOCQ13519 176 aa13.51□□□□□ -0.25
SRGAP3-210ENST00000491467 CCDC85BQ15834 202 aaPredicted RBP13.51□□□□□ -0.25
SRGAP3-210ENST00000491467 DPCR1Q3MIW9 517 aa13.51□□□□□ -0.25
SRGAP3-210ENST00000491467 EARS2Q5JPH6 523 aaKnown RBP13.51□□□□□ -0.25
SRGAP3-210ENST00000491467 POTEEQ6S8J3 1075 aa13.51□□□□□ -0.25
SRGAP3-210ENST00000491467 SH3RF1Q7Z6J0 888 aa13.51□□□□□ -0.25
SRGAP3-210ENST00000491467 GTPBP4Q9BZE4 634 aaKnown RBP13.51□□□□□ -0.25
SRGAP3-210ENST00000491467 PCDHA6Q9UN73 950 aa13.51□□□□□ -0.25
SRGAP3-210ENST00000491467 PCDHA8Q9Y5H6 950 aa13.51□□□□□ -0.25
SRGAP3-210ENST00000491467 DNAH12Q6ZR08 3092 aa13.51□□□□□ -0.25
SRGAP3-210ENST00000491467 DOCK3Q8IZD9 2030 aa13.51□□□□□ -0.25
SRGAP3-210ENST00000491467 ATRNL1Q5VV63 1379 aa13.5□□□□□ -0.25
SRGAP3-210ENST00000491467 PFASO15067 1338 aa13.5□□□□□ -0.25
SRGAP3-210ENST00000491467 MYL1P05976 194 aa13.5□□□□□ -0.25
SRGAP3-210ENST00000491467 AKR1B1P15121 316 aa13.5□□□□□ -0.25
SRGAP3-210ENST00000491467 NAPAP54920 295 aa13.5□□□□□ -0.25
SRGAP3-210ENST00000491467 MYL5Q02045 173 aa13.5□□□□□ -0.25
SRGAP3-210ENST00000491467 MORC3Q14149 939 aa13.5□□□□□ -0.25
SRGAP3-210ENST00000491467 NONOQ15233 471 aaKnown RBP eCLIP13.5□□□□□ -0.25
SRGAP3-210ENST00000491467 C9orf50Q5SZB4 431 aa13.5□□□□□ -0.25
SRGAP3-210ENST00000491467 MCTP2Q6DN12 878 aa13.5□□□□□ -0.25
SRGAP3-210ENST00000491467 HEATR3Q7Z4Q2 680 aa13.5□□□□□ -0.25
SRGAP3-210ENST00000491467 TEX2Q8IWB9 1127 aa13.5□□□□□ -0.25
SRGAP3-210ENST00000491467 C4orf32Q8N8J7 132 aa13.5□□□□□ -0.25
SRGAP3-210ENST00000491467 AK8Q96MA6 479 aa13.5□□□□□ -0.25
SRGAP3-210ENST00000491467 GAS2L1Q99501 681 aaPredicted RBP13.5□□□□□ -0.25
SRGAP3-210ENST00000491467 KANSL2Q9H9L4 492 aa13.5□□□□□ -0.25
SRGAP3-210ENST00000491467 C11orf16Q9NQ32 467 aa13.5□□□□□ -0.25
SRGAP3-210ENST00000491467 LTBP2Q14767 1821 aa13.5□□□□□ -0.25
SRGAP3-210ENST00000491467 MYO9BQ13459 2157 aa13.49□□□□□ -0.25
SRGAP3-210ENST00000491467 PNMA6FA0A0J9YX94 578 aa13.49□□□□□ -0.25
SRGAP3-210ENST00000491467 FAM205CA6NFA0 338 aa13.49□□□□□ -0.25
SRGAP3-210ENST00000491467 SMCO2A6NFE2 343 aa13.49□□□□□ -0.25
SRGAP3-210ENST00000491467 GRIN1Q05586 938 aa13.49□□□□□ -0.25
SRGAP3-210ENST00000491467 ZNF543Q08ER8 600 aa13.49□□□□□ -0.25
SRGAP3-210ENST00000491467 LRRC26Q2I0M4 334 aa13.49□□□□□ -0.25
SRGAP3-210ENST00000491467 SLC35G1Q2M3R5 365 aa13.49□□□□□ -0.25
SRGAP3-210ENST00000491467 TATDN1Q6P1N9 297 aa13.49□□□□□ -0.25
SRGAP3-210ENST00000491467 USP17L2Q6R6M4 530 aa13.49□□□□□ -0.25
SRGAP3-210ENST00000491467 DTHD1Q6ZMT9 781 aa13.49□□□□□ -0.25
SRGAP3-210ENST00000491467 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.49□□□□□ -0.25
SRGAP3-210ENST00000491467 ENOX1Q8TC92 643 aaKnown RBP13.49□□□□□ -0.25
SRGAP3-210ENST00000491467 DCAF4Q8WV16 495 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms