RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 ALAS1P13196 640 aa13.24□□□□□ -0.29
CLCNKA-206ENST00000491433 ZP2Q05996 745 aa13.24□□□□□ -0.29
CLCNKA-206ENST00000491433 PDE4BQ07343 736 aa13.24□□□□□ -0.29
CLCNKA-206ENST00000491433 ST3GAL2Q16842 350 aa13.24□□□□□ -0.29
CLCNKA-206ENST00000491433 HERC4Q5GLZ8 1057 aaPredicted RBP13.24□□□□□ -0.29
CLCNKA-206ENST00000491433 NFRKBQ6P4R8 1299 aa13.24□□□□□ -0.29
CLCNKA-206ENST00000491433 MORC4Q8TE76 937 aa13.24□□□□□ -0.29
CLCNKA-206ENST00000491433 GMCL1Q96IK5 515 aa13.24□□□□□ -0.29
CLCNKA-206ENST00000491433 STRBPQ96SI9 672 aaKnown RBP13.24□□□□□ -0.29
CLCNKA-206ENST00000491433 TRMT13Q9NUP7 481 aaKnown RBP13.24□□□□□ -0.29
CLCNKA-206ENST00000491433 TANC1Q9C0D5 1861 aa13.24□□□□□ -0.29
CLCNKA-206ENST00000491433 PLIN4Q96Q06 1357 aa13.23□□□□□ -0.29
CLCNKA-206ENST00000491433 TRIOO75962 3097 aa13.23□□□□□ -0.29
CLCNKA-206ENST00000491433 GSG1L2A8MUP6 293 aa13.23□□□□□ -0.29
CLCNKA-206ENST00000491433 PARNO95453 639 aaKnown RBP13.23□□□□□ -0.29
CLCNKA-206ENST00000491433 MYL3P08590 195 aa13.23□□□□□ -0.29
CLCNKA-206ENST00000491433 CYP2C9P11712 490 aa13.23□□□□□ -0.29
CLCNKA-206ENST00000491433 RLBP1P12271 317 aa13.23□□□□□ -0.29
CLCNKA-206ENST00000491433 SLC1A4P43007 532 aa13.23□□□□□ -0.29
CLCNKA-206ENST00000491433 PURAQ00577 322 aaKnown RBP13.23□□□□□ -0.29
CLCNKA-206ENST00000491433 SLFNL1Q499Z3 407 aa13.23□□□□□ -0.29
CLCNKA-206ENST00000491433 FAM47CQ5HY64 1035 aa13.23□□□□□ -0.29
CLCNKA-206ENST00000491433 EEPD1Q7L9B9 569 aa13.23□□□□□ -0.29
CLCNKA-206ENST00000491433 FBXO16Q8IX29 292 aaPredicted RBP13.23□□□□□ -0.29
CLCNKA-206ENST00000491433 STK11IPQ8N1F8 1099 aa13.23□□□□□ -0.29
CLCNKA-206ENST00000491433 LRRC47Q8N1G4 583 aaKnown RBP13.23□□□□□ -0.29
CLCNKA-206ENST00000491433 EDAQ92838 391 aa13.23□□□□□ -0.29
CLCNKA-206ENST00000491433 VWCEQ96DN2 955 aa13.23□□□□□ -0.29
CLCNKA-206ENST00000491433 FSD1Q9BTV5 496 aa13.23□□□□□ -0.29
CLCNKA-206ENST00000491433 CHMP4BQ9H444 224 aaKnown RBP13.23□□□□□ -0.29
CLCNKA-206ENST00000491433 PDGFCQ9NRA1 345 aa13.23□□□□□ -0.29
CLCNKA-206ENST00000491433 CYP39A1Q9NYL5 469 aa13.23□□□□□ -0.29
CLCNKA-206ENST00000491433 NOD1Q9Y239 953 aa13.23□□□□□ -0.29
CLCNKA-206ENST00000491433 SCN10AQ9Y5Y9 1956 aa13.22□□□□□ -0.29
CLCNKA-206ENST00000491433 TMEM221A6NGB7 291 aa13.22□□□□□ -0.29
CLCNKA-206ENST00000491433 C19orf67A6NJJ6 358 aa13.22□□□□□ -0.29
CLCNKA-206ENST00000491433 M0R296 226 aa13.22□□□□□ -0.29
CLCNKA-206ENST00000491433 CENPBP07199 599 aaPredicted RBP13.22□□□□□ -0.29
CLCNKA-206ENST00000491433 IQCF3P0C7M6 154 aa13.22□□□□□ -0.29
CLCNKA-206ENST00000491433 TDO2P48775 406 aa13.22□□□□□ -0.29
CLCNKA-206ENST00000491433 FBXL6Q8N531 539 aa13.22□□□□□ -0.29
CLCNKA-206ENST00000491433 NEDD1Q8NHV4 660 aa13.22□□□□□ -0.29
CLCNKA-206ENST00000491433 CAGE1Q8TC20 777 aa13.22□□□□□ -0.29
CLCNKA-206ENST00000491433 ZBED2Q9BTP6 218 aa13.22□□□□□ -0.29
CLCNKA-206ENST00000491433 WDR11Q9BZH6 1224 aa13.22□□□□□ -0.29
CLCNKA-206ENST00000491433 BCL11AQ9H165 835 aa13.22□□□□□ -0.29
CLCNKA-206ENST00000491433 MUTYHQ9UIF7 546 aa13.22□□□□□ -0.29
CLCNKA-206ENST00000491433 PNMA2Q9UL42 364 aa13.22□□□□□ -0.29
CLCNKA-206ENST00000491433 MYO15AQ9UKN7 3530 aa13.22□□□□□ -0.29
CLCNKA-206ENST00000491433 COL4A4P53420 1690 aaPredicted RBP13.21□□□□□ -0.29
CLCNKA-206ENST00000491433 COL4A6Q14031 1691 aa13.21□□□□□ -0.29
CLCNKA-206ENST00000491433 TECTAO75443 2155 aa13.21□□□□□ -0.29
CLCNKA-206ENST00000491433 B4DLN1 442 aa13.21□□□□□ -0.29
CLCNKA-206ENST00000491433 H0Y858 1186 aa13.21□□□□□ -0.29
CLCNKA-206ENST00000491433 EFCAB14O75071 495 aa13.21□□□□□ -0.29
CLCNKA-206ENST00000491433 ZFYP08048 801 aaPredicted RBP13.21□□□□□ -0.29
CLCNKA-206ENST00000491433 MRPL12P52815 198 aaKnown RBP13.21□□□□□ -0.29
CLCNKA-206ENST00000491433 NBPF20Q3BBV1 942 aa13.21□□□□□ -0.29
CLCNKA-206ENST00000491433 NSMFQ6X4W1 530 aa13.21□□□□□ -0.29
CLCNKA-206ENST00000491433 ADHFE1Q8IWW8 467 aa13.21□□□□□ -0.29
CLCNKA-206ENST00000491433 OR6J1Q8NGC5 347 aa13.21□□□□□ -0.29
CLCNKA-206ENST00000491433 APPBP2Q92624 585 aa13.21□□□□□ -0.29
CLCNKA-206ENST00000491433 NACAP1Q9BZK3 213 aa13.21□□□□□ -0.29
CLCNKA-206ENST00000491433 TLR9Q9NR96 1032 aa13.21□□□□□ -0.29
CLCNKA-206ENST00000491433 CCPG1Q9ULG6 757 aa13.21□□□□□ -0.29
CLCNKA-206ENST00000491433 FASNP49327 2511 aaKnown RBP13.21□□□□□ -0.29
CLCNKA-206ENST00000491433 RBM47A0AV96 593 aaKnown RBP13.2□□□□□ -0.3
CLCNKA-206ENST00000491433 APPP05067 770 aa13.2□□□□□ -0.3
CLCNKA-206ENST00000491433 IRS1P35568 1242 aa13.2□□□□□ -0.3
CLCNKA-206ENST00000491433 ALDH5A1P51649 535 aaPredicted RBP13.2□□□□□ -0.3
CLCNKA-206ENST00000491433 RCSD1Q6JBY9 416 aa13.2□□□□□ -0.3
CLCNKA-206ENST00000491433 TRIM67Q6ZTA4 783 aa13.2□□□□□ -0.3
CLCNKA-206ENST00000491433 ADSSL1Q8N142 457 aa13.2□□□□□ -0.3
CLCNKA-206ENST00000491433 AFAP1L1Q8TED9 768 aa13.2□□□□□ -0.3
CLCNKA-206ENST00000491433 ALG13Q9NP73 1137 aaKnown RBP13.2□□□□□ -0.3
CLCNKA-206ENST00000491433 LPXNO60711 386 aa13.19□□□□□ -0.3
CLCNKA-206ENST00000491433 PRDM1O75626 825 aa13.19□□□□□ -0.3
CLCNKA-206ENST00000491433 ICAM1P05362 532 aa13.19□□□□□ -0.3
CLCNKA-206ENST00000491433 PPP2R5BQ15173 497 aa13.19□□□□□ -0.3
CLCNKA-206ENST00000491433 KBTBD3Q8NAB2 608 aa13.19□□□□□ -0.3
CLCNKA-206ENST00000491433 RMDN1Q96DB5 314 aa13.19□□□□□ -0.3
CLCNKA-206ENST00000491433 TGS1Q96RS0 853 aaKnown RBP13.19□□□□□ -0.3
CLCNKA-206ENST00000491433 CRBNQ96SW2 442 aa13.19□□□□□ -0.3
CLCNKA-206ENST00000491433 POP1Q99575 1024 aaKnown RBP13.19□□□□□ -0.3
CLCNKA-206ENST00000491433 CTNNA3Q9UI47 895 aa13.19□□□□□ -0.3
CLCNKA-206ENST00000491433 DDX19BQ9UMR2 479 aa13.19□□□□□ -0.3
CLCNKA-206ENST00000491433 TRIP12Q14669 1992 aaPredicted RBP13.19□□□□□ -0.3
CLCNKA-206ENST00000491433 LCTP09848 1927 aa13.19□□□□□ -0.3
CLCNKA-206ENST00000491433 SIP14410 1827 aa13.18□□□□□ -0.3
CLCNKA-206ENST00000491433 ABHD14A-ACY1A0A1B0GW23 586 aa13.18□□□□□ -0.3
CLCNKA-206ENST00000491433 PATL2C9JE40 543 aaKnown RBP13.18□□□□□ -0.3
CLCNKA-206ENST00000491433 GPAA1O43292 621 aa13.18□□□□□ -0.3
CLCNKA-206ENST00000491433 CHGBP05060 677 aa13.18□□□□□ -0.3
CLCNKA-206ENST00000491433 MCCP23508 829 aa13.18□□□□□ -0.3
CLCNKA-206ENST00000491433 NBL1P41271 181 aa13.18□□□□□ -0.3
CLCNKA-206ENST00000491433 WDR5P61964 334 aaKnown RBP13.18□□□□□ -0.3
CLCNKA-206ENST00000491433 TFAP4Q01664 338 aa13.18□□□□□ -0.3
CLCNKA-206ENST00000491433 MUM1L1Q5H9M0 696 aa13.18□□□□□ -0.3
CLCNKA-206ENST00000491433 CNKSR3Q6P9H4 555 aa13.18□□□□□ -0.3
CLCNKA-206ENST00000491433 SCFD2Q8WU76 684 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms