RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 WDR78Q5VTH9 848 aa24.79■■□□□ 1.56
VCPKMT-204ENST00000491402 CCAR1Q8IX12 1150 aaKnown RBP24.79■■□□□ 1.56
VCPKMT-204ENST00000491402 ARHGAP39Q9C0H5 1083 aa24.79■■□□□ 1.56
VCPKMT-204ENST00000491402 TFIP11Q9UBB9 837 aaKnown RBP24.79■■□□□ 1.56
VCPKMT-204ENST00000491402 ZNFX1Q9P2E3 1918 aaKnown RBP24.79■■□□□ 1.56
VCPKMT-204ENST00000491402 PFASO15067 1338 aa24.79■■□□□ 1.56
VCPKMT-204ENST00000491402 WNT7AO00755 349 aa24.78■■□□□ 1.56
VCPKMT-204ENST00000491402 ATP2B1P20020 1258 aa24.78■■□□□ 1.56
VCPKMT-204ENST00000491402 CTGFP29279 349 aa24.78■■□□□ 1.56
VCPKMT-204ENST00000491402 NEK8Q86SG6 692 aa24.78■■□□□ 1.56
VCPKMT-204ENST00000491402 CD99L2Q8TCZ2 262 aa24.78■■□□□ 1.56
VCPKMT-204ENST00000491402 GBP4Q96PP9 640 aa24.78■■□□□ 1.56
VCPKMT-204ENST00000491402 CFAP45Q9UL16 551 aa24.78■■□□□ 1.56
VCPKMT-204ENST00000491402 CNPY2Q9Y2B0 182 aa24.78■■□□□ 1.56
VCPKMT-204ENST00000491402 CASP8AP2Q9UKL3 1982 aa24.78■■□□□ 1.56
VCPKMT-204ENST00000491402 SREBF1P36956 1147 aa24.77■■□□□ 1.56
VCPKMT-204ENST00000491402 CAP1Q01518 475 aa24.77■■□□□ 1.56
VCPKMT-204ENST00000491402 CEBPZQ03701 1054 aaKnown RBP24.77■■□□□ 1.56
VCPKMT-204ENST00000491402 CRYGNQ8WXF5 182 aa24.77■■□□□ 1.56
VCPKMT-204ENST00000491402 PCDHB6Q9Y5E3 794 aa24.77■■□□□ 1.56
VCPKMT-204ENST00000491402 PSMC4P43686 418 aa24.77■■□□□ 1.56
VCPKMT-204ENST00000491402 KIF22Q14807 665 aa24.77■■□□□ 1.56
VCPKMT-204ENST00000491402 TTC38Q5R3I4 469 aa24.77■■□□□ 1.56
VCPKMT-204ENST00000491402 PURBQ96QR8 312 aaKnown RBP24.77■■□□□ 1.56
VCPKMT-204ENST00000491402 EHMT1Q9H9B1 1298 aa24.77■■□□□ 1.56
VCPKMT-204ENST00000491402 POLR3EQ9NVU0 708 aa24.77■■□□□ 1.56
VCPKMT-204ENST00000491402 CLIC4Q9Y696 253 aa24.77■■□□□ 1.56
VCPKMT-204ENST00000491402 ARHGAP4P98171 946 aa24.76■■□□□ 1.55
VCPKMT-204ENST00000491402 KCTD2Q14681 263 aa24.76■■□□□ 1.55
VCPKMT-204ENST00000491402 LETM2Q2VYF4 491 aa24.76■■□□□ 1.55
VCPKMT-204ENST00000491402 ANO1Q5XXA6 986 aa24.76■■□□□ 1.55
VCPKMT-204ENST00000491402 TAAR1Q96RJ0 339 aa24.76■■□□□ 1.55
VCPKMT-204ENST00000491402 MMP19Q99542 508 aa24.76■■□□□ 1.55
VCPKMT-204ENST00000491402 FIBPO43427 364 aa24.75■■□□□ 1.55
VCPKMT-204ENST00000491402 EDIL3O43854 480 aa24.75■■□□□ 1.55
VCPKMT-204ENST00000491402 FCER1AP12319 257 aa24.75■■□□□ 1.55
VCPKMT-204ENST00000491402 MAPK4P31152 587 aa24.75■■□□□ 1.55
VCPKMT-204ENST00000491402 SF3A1Q15459 793 aaKnown RBP24.75■■□□□ 1.55
VCPKMT-204ENST00000491402 ERO1AQ96HE7 468 aa24.75■■□□□ 1.55
VCPKMT-204ENST00000491402 TRIM47Q96LD4 638 aa24.75■■□□□ 1.55
VCPKMT-204ENST00000491402 RMDN3Q96TC7 470 aa24.75■■□□□ 1.55
VCPKMT-204ENST00000491402 RTEL1Q9NZ71 1219 aa24.75■■□□□ 1.55
VCPKMT-204ENST00000491402 FRMPD4Q14CM0 1322 aa24.75■■□□□ 1.55
VCPKMT-204ENST00000491402 RPTORQ8N122 1335 aa24.75■■□□□ 1.55
VCPKMT-204ENST00000491402 NASPP49321 788 aaPredicted RBP24.75■■□□□ 1.55
VCPKMT-204ENST00000491402 GDPD2Q9HCC8 539 aa24.75■■□□□ 1.55
VCPKMT-204ENST00000491402 ZSWIM8A7E2V4 1837 aa24.74■■□□□ 1.55
VCPKMT-204ENST00000491402 CCNT1O60563 726 aaKnown RBP24.74■■□□□ 1.55
VCPKMT-204ENST00000491402 USP11P51784 963 aa24.74■■□□□ 1.55
VCPKMT-204ENST00000491402 GPR142Q7Z601 462 aa24.74■■□□□ 1.55
VCPKMT-204ENST00000491402 SCAND2PQ9GZW5 306 aaPredicted RBP24.74■■□□□ 1.55
VCPKMT-204ENST00000491402 PXMP2Q9NR77 195 aa24.74■■□□□ 1.55
VCPKMT-204ENST00000491402 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.74■■□□□ 1.55
VCPKMT-204ENST00000491402 DOCK3Q8IZD9 2030 aa24.73■■□□□ 1.55
VCPKMT-204ENST00000491402 TNPO2O14787 897 aaKnown RBP24.73■■□□□ 1.55
VCPKMT-204ENST00000491402 MCM7P33993 719 aa24.73■■□□□ 1.55
VCPKMT-204ENST00000491402 FCGRTP55899 365 aa24.73■■□□□ 1.55
VCPKMT-204ENST00000491402 UBXN2AP68543 259 aa24.73■■□□□ 1.55
VCPKMT-204ENST00000491402 ZNF174Q15697 407 aa24.73■■□□□ 1.55
VCPKMT-204ENST00000491402 IVNS1ABPQ9Y6Y0 642 aa24.73■■□□□ 1.55
VCPKMT-204ENST00000491402 PLXNA1Q9UIW2 1896 aa24.73■■□□□ 1.55
VCPKMT-204ENST00000491402 POTEB2H3BUK9 544 aa24.72■■□□□ 1.55
VCPKMT-204ENST00000491402 STRNO43815 780 aa24.72■■□□□ 1.55
VCPKMT-204ENST00000491402 CNTN2Q02246 1040 aa24.72■■□□□ 1.55
VCPKMT-204ENST00000491402 ARHGEF16Q5VV41 709 aa24.72■■□□□ 1.55
VCPKMT-204ENST00000491402 ABRAQ8N0Z2 381 aa24.72■■□□□ 1.55
VCPKMT-204ENST00000491402 FAM133AQ8N9E0 248 aa24.72■■□□□ 1.55
VCPKMT-204ENST00000491402 LINC00301Q8NCQ3 95 aa24.72■■□□□ 1.55
VCPKMT-204ENST00000491402 SPATA32Q96LK8 384 aa24.72■■□□□ 1.55
VCPKMT-204ENST00000491402 MGAMO43451 1857 aa24.72■■□□□ 1.55
VCPKMT-204ENST00000491402 DNAJC25-GNG10A0A024R161 153 aa24.72■■□□□ 1.55
VCPKMT-204ENST00000491402 TDP2O95551 362 aa24.72■■□□□ 1.55
VCPKMT-204ENST00000491402 YEATS4O95619 227 aa24.72■■□□□ 1.55
VCPKMT-204ENST00000491402 CYP3A4P08684 503 aa24.72■■□□□ 1.55
VCPKMT-204ENST00000491402 EIF2AK2P19525 551 aaKnown RBP24.72■■□□□ 1.55
VCPKMT-204ENST00000491402 PTPAQ15257 358 aa24.72■■□□□ 1.55
VCPKMT-204ENST00000491402 PLEKHH3Q7Z736 793 aa24.72■■□□□ 1.55
VCPKMT-204ENST00000491402 DNERQ8NFT8 737 aa24.72■■□□□ 1.55
VCPKMT-204ENST00000491402 NSUN6Q8TEA1 469 aaKnown RBP24.72■■□□□ 1.55
VCPKMT-204ENST00000491402 LEO1Q8WVC0 666 aaPredicted RBP24.72■■□□□ 1.55
VCPKMT-204ENST00000491402 ZNF236Q9UL36 1845 aa24.72■■□□□ 1.55
VCPKMT-204ENST00000491402 ASTN1O14525 1302 aa24.71■■□□□ 1.55
VCPKMT-204ENST00000491402 PGK2P07205 417 aa24.71■■□□□ 1.55
VCPKMT-204ENST00000491402 PGM5Q15124 567 aa24.71■■□□□ 1.55
VCPKMT-204ENST00000491402 PPP4R3AQ6IN85 833 aa24.71■■□□□ 1.55
VCPKMT-204ENST00000491402 IL31RAQ8NI17 732 aa24.71■■□□□ 1.55
VCPKMT-204ENST00000491402 PDCD2LQ9BRP1 358 aa24.71■■□□□ 1.55
VCPKMT-204ENST00000491402 CEP131Q9UPN4 1083 aa24.71■■□□□ 1.55
VCPKMT-204ENST00000491402 GCFC2P16383 781 aaKnown RBP24.7■■□□□ 1.55
VCPKMT-204ENST00000491402 ADORA2AP29274 412 aa24.7■■□□□ 1.55
VCPKMT-204ENST00000491402 GRB14Q14449 540 aa24.7■■□□□ 1.55
VCPKMT-204ENST00000491402 STK38Q15208 465 aa24.7■■□□□ 1.55
VCPKMT-204ENST00000491402 MOXD1Q6UVY6 613 aa24.7■■□□□ 1.55
VCPKMT-204ENST00000491402 NAP1L4Q99733 375 aaKnown RBP24.7■■□□□ 1.55
VCPKMT-204ENST00000491402 RCOR1Q9UKL0 485 aa24.7■■□□□ 1.55
VCPKMT-204ENST00000491402 BMP15O95972 392 aa24.7■■□□□ 1.54
VCPKMT-204ENST00000491402 PTPREP23469 700 aa24.7■■□□□ 1.54
VCPKMT-204ENST00000491402 CIITAP33076 1130 aa24.7■■□□□ 1.54
VCPKMT-204ENST00000491402 ORC2Q13416 577 aaPredicted RBP24.7■■□□□ 1.54
VCPKMT-204ENST00000491402 SLC39A14Q15043 492 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms