RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 GCOM1H8Y6P7 765 aaPredicted RBP19.2■□□□□ 0.66
PDLIM2-217ENST00000491330 POLR2MP0CAP2 368 aa19.2■□□□□ 0.66
PDLIM2-217ENST00000491330 EDNRBP24530 442 aa19.2■□□□□ 0.66
PDLIM2-217ENST00000491330 GRM4Q14833 912 aa19.2■□□□□ 0.66
PDLIM2-217ENST00000491330 PSRC1Q6PGN9 363 aaPredicted RBP19.2■□□□□ 0.66
PDLIM2-217ENST00000491330 FAM126BQ8IXS8 530 aa19.2■□□□□ 0.66
PDLIM2-217ENST00000491330 MAP3K14Q99558 947 aa19.2■□□□□ 0.66
PDLIM2-217ENST00000491330 IL25Q9H293 177 aa19.2■□□□□ 0.66
PDLIM2-217ENST00000491330 MAD2L2Q9UI95 211 aa19.2■□□□□ 0.66
PDLIM2-217ENST00000491330 NOD1Q9Y239 953 aa19.2■□□□□ 0.66
PDLIM2-217ENST00000491330 ASTN1O14525 1302 aa19.2■□□□□ 0.66
PDLIM2-217ENST00000491330 PNMA6FA0A0J9YX94 578 aa19.19■□□□□ 0.66
PDLIM2-217ENST00000491330 GH1P01241 217 aa19.19■□□□□ 0.66
PDLIM2-217ENST00000491330 SMAD3P84022 425 aaKnown RBP19.19■□□□□ 0.66
PDLIM2-217ENST00000491330 SEPT14Q6ZU15 432 aa19.19■□□□□ 0.66
PDLIM2-217ENST00000491330 RPUSD2Q8IZ73 545 aaKnown RBP19.19■□□□□ 0.66
PDLIM2-217ENST00000491330 STAG2Q8N3U4 1231 aa19.19■□□□□ 0.66
PDLIM2-217ENST00000491330 CUL5Q93034 780 aa19.19■□□□□ 0.66
PDLIM2-217ENST00000491330 RRP36Q96EU6 259 aaKnown RBP19.19■□□□□ 0.66
PDLIM2-217ENST00000491330 ESYT1Q9BSJ8 1104 aa19.19■□□□□ 0.66
PDLIM2-217ENST00000491330 HIPK3Q9H422 1215 aa19.19■□□□□ 0.66
PDLIM2-217ENST00000491330 TBX21Q9UL17 535 aa19.19■□□□□ 0.66
PDLIM2-217ENST00000491330 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.18■□□□□ 0.66
PDLIM2-217ENST00000491330 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.18■□□□□ 0.66
PDLIM2-217ENST00000491330 CTAGE5O15320 804 aa19.18■□□□□ 0.66
PDLIM2-217ENST00000491330 PRC1O43663 620 aa19.18■□□□□ 0.66
PDLIM2-217ENST00000491330 DDAH1O94760 285 aa19.18■□□□□ 0.66
PDLIM2-217ENST00000491330 EIF2AK2P19525 551 aaKnown RBP19.18■□□□□ 0.66
PDLIM2-217ENST00000491330 CASTP20810 708 aaKnown RBP19.18■□□□□ 0.66
PDLIM2-217ENST00000491330 FAM47CQ5HY64 1035 aa19.18■□□□□ 0.66
PDLIM2-217ENST00000491330 CHST3Q7LGC8 479 aa19.18■□□□□ 0.66
PDLIM2-217ENST00000491330 SLC43A3Q8NBI5 491 aa19.18■□□□□ 0.66
PDLIM2-217ENST00000491330 TAAR1Q96RJ0 339 aa19.18■□□□□ 0.66
PDLIM2-217ENST00000491330 PPP1R12CQ9BZL4 782 aa19.18■□□□□ 0.66
PDLIM2-217ENST00000491330 MRVI1Q9Y6F6 885 aa19.18■□□□□ 0.66
PDLIM2-217ENST00000491330 SMCHD1A6NHR9 2005 aa19.18■□□□□ 0.66
PDLIM2-217ENST00000491330 NR3C2P08235 984 aa19.17■□□□□ 0.66
PDLIM2-217ENST00000491330 SMARCA1P28370 1054 aa19.17■□□□□ 0.66
PDLIM2-217ENST00000491330 IRX5P78411 483 aaPredicted RBP19.17■□□□□ 0.66
PDLIM2-217ENST00000491330 PTPN11Q06124 597 aaPredicted RBP19.17■□□□□ 0.66
PDLIM2-217ENST00000491330 RETREG2Q8NC44 543 aa19.17■□□□□ 0.66
PDLIM2-217ENST00000491330 RIOX1Q9H6W3 641 aa19.17■□□□□ 0.66
PDLIM2-217ENST00000491330 A6NJR5 290 aa19.16■□□□□ 0.66
PDLIM2-217ENST00000491330 MYCLP12524 364 aaPredicted RBP19.16■□□□□ 0.66
PDLIM2-217ENST00000491330 PURAQ00577 322 aaKnown RBP19.16■□□□□ 0.66
PDLIM2-217ENST00000491330 TROAPQ12815 778 aa19.16■□□□□ 0.66
PDLIM2-217ENST00000491330 LAMC2Q13753 1193 aa19.16■□□□□ 0.66
PDLIM2-217ENST00000491330 C9orf50Q5SZB4 431 aa19.16■□□□□ 0.66
PDLIM2-217ENST00000491330 CCDC155Q8N6L0 562 aa19.16■□□□□ 0.66
PDLIM2-217ENST00000491330 PIGSQ96S52 555 aa19.16■□□□□ 0.66
PDLIM2-217ENST00000491330 KATNAL1Q9BW62 490 aa19.16■□□□□ 0.66
PDLIM2-217ENST00000491330 STXBP5LQ9Y2K9 1186 aa19.16■□□□□ 0.66
PDLIM2-217ENST00000491330 SLC12A7Q9Y666 1083 aa19.16■□□□□ 0.66
PDLIM2-217ENST00000491330 DDX49Q9Y6V7 483 aaKnown RBP19.16■□□□□ 0.66
PDLIM2-217ENST00000491330 TMEM265A0A087WTH1 108 aa19.15■□□□□ 0.66
PDLIM2-217ENST00000491330 CD4P01730 458 aa19.15■□□□□ 0.66
PDLIM2-217ENST00000491330 FGBP02675 491 aa19.15■□□□□ 0.66
PDLIM2-217ENST00000491330 CCND2P30279 289 aa19.15■□□□□ 0.66
PDLIM2-217ENST00000491330 HSD17B4P51659 736 aa19.15■□□□□ 0.66
PDLIM2-217ENST00000491330 CHMP4BP1P59074 171 aa19.15■□□□□ 0.66
PDLIM2-217ENST00000491330 KRT32Q14532 448 aa19.15■□□□□ 0.66
PDLIM2-217ENST00000491330 DGKDQ16760 1214 aa19.15■□□□□ 0.66
PDLIM2-217ENST00000491330 GNPTABQ3T906 1256 aa19.15■□□□□ 0.66
PDLIM2-217ENST00000491330 NFRKBQ6P4R8 1299 aa19.15■□□□□ 0.66
PDLIM2-217ENST00000491330 DHX37Q8IY37 1157 aaKnown RBP19.15■□□□□ 0.66
PDLIM2-217ENST00000491330 MB21D2Q8IYB1 491 aaPredicted RBP19.15■□□□□ 0.66
PDLIM2-217ENST00000491330 ZNF654Q8IZM8 581 aa19.15■□□□□ 0.66
PDLIM2-217ENST00000491330 IGDCC4Q8TDY8 1250 aa19.15■□□□□ 0.66
PDLIM2-217ENST00000491330 TBC1D5Q92609 795 aa19.15■□□□□ 0.66
PDLIM2-217ENST00000491330 MTMR8Q96EF0 704 aa19.15■□□□□ 0.66
PDLIM2-217ENST00000491330 ALDH8A1Q9H2A2 487 aaPredicted RBP19.15■□□□□ 0.66
PDLIM2-217ENST00000491330 PXMP2Q9NR77 195 aa19.15■□□□□ 0.66
PDLIM2-217ENST00000491330 MTMR10Q9NXD2 777 aa19.15■□□□□ 0.66
PDLIM2-217ENST00000491330 SLC27A2O14975 620 aa19.14■□□□□ 0.65
PDLIM2-217ENST00000491330 CDC45O75419 566 aa19.14■□□□□ 0.65
PDLIM2-217ENST00000491330 TGFB3P10600 412 aa19.14■□□□□ 0.65
PDLIM2-217ENST00000491330 CSF2RAP15509 400 aa19.14■□□□□ 0.65
PDLIM2-217ENST00000491330 LIFRP42702 1097 aa19.14■□□□□ 0.65
PDLIM2-217ENST00000491330 PSMC6P62333 389 aa19.14■□□□□ 0.65
PDLIM2-217ENST00000491330 FGD1P98174 961 aa19.14■□□□□ 0.65
PDLIM2-217ENST00000491330 CREB3L3Q68CJ9 461 aa19.14■□□□□ 0.65
PDLIM2-217ENST00000491330 FCHSD1Q86WN1 690 aa19.14■□□□□ 0.65
PDLIM2-217ENST00000491330 SLC17A8Q8NDX2 589 aa19.14■□□□□ 0.65
PDLIM2-217ENST00000491330 SMARCC2Q8TAQ2 1214 aa19.14■□□□□ 0.65
PDLIM2-217ENST00000491330 LSG1Q9H089 658 aaKnown RBP19.14■□□□□ 0.65
PDLIM2-217ENST00000491330 IL23AQ9NPF7 189 aa19.14■□□□□ 0.65
PDLIM2-217ENST00000491330 STAM2O75886 525 aa19.13■□□□□ 0.65
PDLIM2-217ENST00000491330 PFKMP08237 780 aa19.13■□□□□ 0.65
PDLIM2-217ENST00000491330 HMGB1P09429 215 aaKnown RBP19.13■□□□□ 0.65
PDLIM2-217ENST00000491330 ACTN1P12814 892 aa19.13■□□□□ 0.65
PDLIM2-217ENST00000491330 ITGB8P26012 769 aa19.13■□□□□ 0.65
PDLIM2-217ENST00000491330 CYP2C18P33260 490 aa19.13■□□□□ 0.65
PDLIM2-217ENST00000491330 BFSP2Q13515 415 aa19.13■□□□□ 0.65
PDLIM2-217ENST00000491330 STOX1Q6ZVD7 989 aa19.13■□□□□ 0.65
PDLIM2-217ENST00000491330 Q7L0L9 218 aa19.13■□□□□ 0.65
PDLIM2-217ENST00000491330 SPZ1Q9BXG8 430 aa19.13■□□□□ 0.65
PDLIM2-217ENST00000491330 TRPV6Q9H1D0 765 aa19.13■□□□□ 0.65
PDLIM2-217ENST00000491330 B4GALT4O60513 344 aa19.12■□□□□ 0.65
PDLIM2-217ENST00000491330 GHRHRQ02643 423 aa19.12■□□□□ 0.65
PDLIM2-217ENST00000491330 LY6KQ17RY6 165 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms