RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 RBM28Q9NW13 759 aaKnown RBP10.67□□□□□ -0.7
SUPT20H-220ENST00000490716 FARP2O94887 1054 aaPredicted RBP10.67□□□□□ -0.7
SUPT20H-220ENST00000490716 PFKFB3Q16875 520 aaPredicted RBP10.67□□□□□ -0.7
SUPT20H-220ENST00000490716 PRPF38BQ5VTL8 546 aaKnown RBP10.67□□□□□ -0.7
SUPT20H-220ENST00000490716 FAM177A1Q8N128 213 aaPredicted RBP10.67□□□□□ -0.7
SUPT20H-220ENST00000490716 TMEM106CQ9BVX2 250 aa10.67□□□□□ -0.7
SUPT20H-220ENST00000490716 BARHL2Q9NY43 387 aa10.67□□□□□ -0.7
SUPT20H-220ENST00000490716 A0A1W2PQ45 241 aaPredicted RBP10.67□□□□□ -0.7
SUPT20H-220ENST00000490716 A0A1W2PQY0 241 aa10.67□□□□□ -0.7
SUPT20H-220ENST00000490716 PRPF3O43395 683 aaKnown RBP10.67□□□□□ -0.7
SUPT20H-220ENST00000490716 RBL2Q08999 1139 aa10.67□□□□□ -0.7
SUPT20H-220ENST00000490716 CATIPQ7Z7H3 387 aa10.67□□□□□ -0.7
SUPT20H-220ENST00000490716 ZMYND12Q9H0C1 365 aa10.67□□□□□ -0.7
SUPT20H-220ENST00000490716 COL4A4P53420 1690 aaPredicted RBP10.66□□□□□ -0.7
SUPT20H-220ENST00000490716 hCG_1984214I3L0E3 225 aa10.66□□□□□ -0.7
SUPT20H-220ENST00000490716 TRDNQ13061 729 aa10.66□□□□□ -0.7
SUPT20H-220ENST00000490716 KIAA1211Q6ZU35 1233 aa10.66□□□□□ -0.7
SUPT20H-220ENST00000490716 ZNF713Q8N859 430 aaPredicted RBP10.66□□□□□ -0.7
SUPT20H-220ENST00000490716 KAT2BQ92831 832 aa10.66□□□□□ -0.7
SUPT20H-220ENST00000490716 TNFRSF25Q93038 417 aa10.66□□□□□ -0.7
SUPT20H-220ENST00000490716 MBOAT7Q96N66 472 aa10.66□□□□□ -0.7
SUPT20H-220ENST00000490716 TOX2Q96NM4 488 aa10.66□□□□□ -0.7
SUPT20H-220ENST00000490716 DDX41Q9UJV9 622 aaKnown RBP10.66□□□□□ -0.7
SUPT20H-220ENST00000490716 MOXD2PA6NHM9 499 aa10.66□□□□□ -0.7
SUPT20H-220ENST00000490716 ECM2O94769 699 aaPredicted RBP10.66□□□□□ -0.7
SUPT20H-220ENST00000490716 IFNAR1P17181 557 aa10.66□□□□□ -0.7
SUPT20H-220ENST00000490716 ADCYAP1R1P41586 468 aa10.66□□□□□ -0.7
SUPT20H-220ENST00000490716 PCNX4Q63HM2 1172 aa10.66□□□□□ -0.7
SUPT20H-220ENST00000490716 TRAF7Q6Q0C0 670 aa10.66□□□□□ -0.7
SUPT20H-220ENST00000490716 ANKRD35Q8N283 1001 aa10.66□□□□□ -0.7
SUPT20H-220ENST00000490716 TCEANC2Q96MN5 208 aa10.66□□□□□ -0.7
SUPT20H-220ENST00000490716 RIC8AQ9NPQ8 531 aa10.66□□□□□ -0.7
SUPT20H-220ENST00000490716 MRPL11Q9Y3B7 192 aaKnown RBP10.66□□□□□ -0.7
SUPT20H-220ENST00000490716 ADAM17P78536 824 aa10.66□□□□□ -0.7
SUPT20H-220ENST00000490716 HIC1Q14526 733 aa10.66□□□□□ -0.7
SUPT20H-220ENST00000490716 RASIP1Q5U651 963 aa10.66□□□□□ -0.7
SUPT20H-220ENST00000490716 B3GNT9Q6UX72 402 aa10.66□□□□□ -0.7
SUPT20H-220ENST00000490716 RALYLQ86SE5 291 aaKnown RBP10.66□□□□□ -0.7
SUPT20H-220ENST00000490716 FAM184BQ9ULE4 1060 aa10.66□□□□□ -0.7
SUPT20H-220ENST00000490716 TPCN1Q9ULQ1 816 aa10.66□□□□□ -0.7
SUPT20H-220ENST00000490716 UBIAD1Q9Y5Z9 338 aa10.66□□□□□ -0.7
SUPT20H-220ENST00000490716 ELP1O95163 1332 aa10.66□□□□□ -0.7
SUPT20H-220ENST00000490716 STK36Q9NRP7 1315 aa10.66□□□□□ -0.7
SUPT20H-220ENST00000490716 IGLV3-22A0A075B6J6 115 aa10.65□□□□□ -0.7
SUPT20H-220ENST00000490716 SPATA31C2B4DYI2 1134 aa10.65□□□□□ -0.7
SUPT20H-220ENST00000490716 POTEB2H3BUK9 544 aa10.65□□□□□ -0.7
SUPT20H-220ENST00000490716 CAPN15O75808 1086 aa10.65□□□□□ -0.7
SUPT20H-220ENST00000490716 FDPSP14324 419 aaKnown RBP10.65□□□□□ -0.7
SUPT20H-220ENST00000490716 RALGAPA2Q2PPJ7 1873 aa10.65□□□□□ -0.7
SUPT20H-220ENST00000490716 MCF2L2Q86YR7 1114 aa10.65□□□□□ -0.7
SUPT20H-220ENST00000490716 FBXO16Q8IX29 292 aaPredicted RBP10.65□□□□□ -0.7
SUPT20H-220ENST00000490716 CMTR1Q8N1G2 835 aaKnown RBP10.65□□□□□ -0.7
SUPT20H-220ENST00000490716 DAGLBQ8NCG7 672 aa10.65□□□□□ -0.7
SUPT20H-220ENST00000490716 LENG9Q96B70 501 aa10.65□□□□□ -0.7
SUPT20H-220ENST00000490716 TELO2Q9Y4R8 837 aa10.65□□□□□ -0.7
SUPT20H-220ENST00000490716 UNC80Q8N2C7 3258 aa10.65□□□□□ -0.7
SUPT20H-220ENST00000490716 KIAA0355O15063 1070 aa10.65□□□□□ -0.7
SUPT20H-220ENST00000490716 CYP3A4P08684 503 aa10.65□□□□□ -0.7
SUPT20H-220ENST00000490716 PURAQ00577 322 aaKnown RBP10.65□□□□□ -0.7
SUPT20H-220ENST00000490716 APOBRQ0VD83 1088 aa10.65□□□□□ -0.7
SUPT20H-220ENST00000490716 GPNMBQ14956 572 aa10.65□□□□□ -0.7
SUPT20H-220ENST00000490716 FAM126BQ8IXS8 530 aa10.65□□□□□ -0.7
SUPT20H-220ENST00000490716 HOMER2Q9NSB8 354 aa10.65□□□□□ -0.7
SUPT20H-220ENST00000490716 TBX21Q9UL17 535 aa10.65□□□□□ -0.7
SUPT20H-220ENST00000490716 PCDHA1Q9Y5I3 950 aa10.65□□□□□ -0.7
SUPT20H-220ENST00000490716 TRIM43BA6NCK2 446 aa10.65□□□□□ -0.71
SUPT20H-220ENST00000490716 PFKFB2O60825 505 aa10.65□□□□□ -0.71
SUPT20H-220ENST00000490716 LARGE1O95461 756 aa10.65□□□□□ -0.71
SUPT20H-220ENST00000490716 ACLYP53396 1101 aa10.65□□□□□ -0.71
SUPT20H-220ENST00000490716 FAAP100Q0VG06 881 aa10.65□□□□□ -0.71
SUPT20H-220ENST00000490716 SART3Q15020 963 aaKnown RBP10.65□□□□□ -0.71
SUPT20H-220ENST00000490716 TRIM43Q96BQ3 446 aaPredicted RBP10.65□□□□□ -0.71
SUPT20H-220ENST00000490716 JAKMIP1Q96N16 626 aaKnown RBP10.65□□□□□ -0.71
SUPT20H-220ENST00000490716 TOMM22Q9NS69 142 aa10.65□□□□□ -0.71
SUPT20H-220ENST00000490716 NKRFO15226 690 aaKnown RBP eCLIP10.64□□□□□ -0.71
SUPT20H-220ENST00000490716 STAM2O75886 525 aa10.64□□□□□ -0.71
SUPT20H-220ENST00000490716 RXRAP19793 462 aa10.64□□□□□ -0.71
SUPT20H-220ENST00000490716 ADD1P35611 737 aaKnown RBP10.64□□□□□ -0.71
SUPT20H-220ENST00000490716 GNAQP50148 359 aa10.64□□□□□ -0.71
SUPT20H-220ENST00000490716 BCAS3Q9H6U6 928 aa10.64□□□□□ -0.71
SUPT20H-220ENST00000490716 IGKV6D-21A0A0A0MT36 114 aa10.64□□□□□ -0.71
SUPT20H-220ENST00000490716 SCRN1Q12765 414 aa10.64□□□□□ -0.71
SUPT20H-220ENST00000490716 XRRA1Q6P2D8 792 aa10.64□□□□□ -0.71
SUPT20H-220ENST00000490716 CASC1Q6TDU7 716 aa10.64□□□□□ -0.71
SUPT20H-220ENST00000490716 NECAB2Q7Z6G3 386 aa10.64□□□□□ -0.71
SUPT20H-220ENST00000490716 GPKOWQ92917 476 aaPredicted RBP eCLIP10.64□□□□□ -0.71
SUPT20H-220ENST00000490716 RNF26Q9BY78 433 aaPredicted RBP10.64□□□□□ -0.71
SUPT20H-220ENST00000490716 PDLIM7Q9NR12 457 aa10.64□□□□□ -0.71
SUPT20H-220ENST00000490716 SH3GLB2Q9NR46 395 aa10.64□□□□□ -0.71
SUPT20H-220ENST00000490716 ATG7O95352 703 aa10.64□□□□□ -0.71
SUPT20H-220ENST00000490716 CASTP20810 708 aaKnown RBP10.64□□□□□ -0.71
SUPT20H-220ENST00000490716 KIF5BP33176 963 aa10.64□□□□□ -0.71
SUPT20H-220ENST00000490716 KCNA10Q16322 511 aa10.64□□□□□ -0.71
SUPT20H-220ENST00000490716 USH1GQ495M9 461 aa10.64□□□□□ -0.71
SUPT20H-220ENST00000490716 GJC2Q5T442 439 aaPredicted RBP10.64□□□□□ -0.71
SUPT20H-220ENST00000490716 XPNPEP3Q9NQH7 507 aa10.64□□□□□ -0.71
SUPT20H-220ENST00000490716 SLC12A7Q9Y666 1083 aa10.64□□□□□ -0.71
SUPT20H-220ENST00000490716 MYH9P35579 1960 aaKnown RBP10.63□□□□□ -0.71
SUPT20H-220ENST00000490716 H0YGN5 161 aa10.63□□□□□ -0.71
SUPT20H-220ENST00000490716 DHX15O43143 795 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms