RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 GBP2P32456 591 aaPredicted RBP15.9■□□□□ 0.14
ARHGEF39-205ENST00000490638 LRMPQ12912 555 aa15.9■□□□□ 0.14
ARHGEF39-205ENST00000490638 SNAPC2Q13487 334 aa15.9■□□□□ 0.14
ARHGEF39-205ENST00000490638 TTBK2Q6IQ55 1244 aa15.9■□□□□ 0.14
ARHGEF39-205ENST00000490638 WDR19Q8NEZ3 1342 aa15.9■□□□□ 0.14
ARHGEF39-205ENST00000490638 LMAN1P49257 510 aa15.9■□□□□ 0.14
ARHGEF39-205ENST00000490638 PPP4CP60510 307 aa15.9■□□□□ 0.14
ARHGEF39-205ENST00000490638 ARHGAP4P98171 946 aa15.9■□□□□ 0.14
ARHGEF39-205ENST00000490638 NFIAQ12857 509 aa15.9■□□□□ 0.14
ARHGEF39-205ENST00000490638 ARHGAP44Q17R89 818 aa15.9■□□□□ 0.14
ARHGEF39-205ENST00000490638 EP400NLQ6ZTU2 488 aa15.9■□□□□ 0.14
ARHGEF39-205ENST00000490638 SGMS1Q86VZ5 419 aa15.9■□□□□ 0.14
ARHGEF39-205ENST00000490638 STAG2Q8N3U4 1231 aa15.9■□□□□ 0.14
ARHGEF39-205ENST00000490638 LINC00301Q8NCQ3 95 aa15.9■□□□□ 0.14
ARHGEF39-205ENST00000490638 TEX13BQ9BXU2 312 aa15.9■□□□□ 0.14
ARHGEF39-205ENST00000490638 NLRC4Q9NPP4 1024 aa15.9■□□□□ 0.14
ARHGEF39-205ENST00000490638 ADARB2Q9NS39 739 aaKnown RBP15.9■□□□□ 0.14
ARHGEF39-205ENST00000490638 A0A1W2PQ27 194 aa15.89■□□□□ 0.13
ARHGEF39-205ENST00000490638 A0A1W2PQ64 194 aa15.89■□□□□ 0.13
ARHGEF39-205ENST00000490638 A0A1W2PQD8 194 aa15.89■□□□□ 0.13
ARHGEF39-205ENST00000490638 RGL2O15211 777 aa15.89■□□□□ 0.13
ARHGEF39-205ENST00000490638 PPP6R2O75170 966 aa15.89■□□□□ 0.13
ARHGEF39-205ENST00000490638 TMEM191BP0C7N4 346 aa15.89■□□□□ 0.13
ARHGEF39-205ENST00000490638 RPS6KC1Q96S38 1066 aa15.89■□□□□ 0.13
ARHGEF39-205ENST00000490638 FAM49AQ9H0Q0 323 aaPredicted RBP15.89■□□□□ 0.13
ARHGEF39-205ENST00000490638 LZTFL1Q9NQ48 299 aa15.89■□□□□ 0.13
ARHGEF39-205ENST00000490638 FAM207AQ9NSI2 230 aaPredicted RBP15.89■□□□□ 0.13
ARHGEF39-205ENST00000490638 TMEM63CQ9P1W3 806 aa15.89■□□□□ 0.13
ARHGEF39-205ENST00000490638 ABCB11O95342 1321 aa15.89■□□□□ 0.13
ARHGEF39-205ENST00000490638 UBE2Q2LH0YL09 131 aa15.89■□□□□ 0.13
ARHGEF39-205ENST00000490638 RPN1P04843 607 aaKnown RBP15.89■□□□□ 0.13
ARHGEF39-205ENST00000490638 EPHX2P34913 555 aa15.89■□□□□ 0.13
ARHGEF39-205ENST00000490638 RCAN1P53805 252 aa15.89■□□□□ 0.13
ARHGEF39-205ENST00000490638 CACNB1Q02641 598 aaPredicted RBP15.89■□□□□ 0.13
ARHGEF39-205ENST00000490638 NFX1Q12986 1120 aaKnown RBP15.89■□□□□ 0.13
ARHGEF39-205ENST00000490638 SELENOOQ9BVL4 669 aa15.89■□□□□ 0.13
ARHGEF39-205ENST00000490638 CUEDC2Q9H467 287 aa15.89■□□□□ 0.13
ARHGEF39-205ENST00000490638 RNF216Q9NWF9 866 aaPredicted RBP15.89■□□□□ 0.13
ARHGEF39-205ENST00000490638 NUB1Q9Y5A7 615 aa15.89■□□□□ 0.13
ARHGEF39-205ENST00000490638 BCRP11274 1271 aa15.89■□□□□ 0.13
ARHGEF39-205ENST00000490638 NACA2Q9H009 215 aa15.89■□□□□ 0.13
ARHGEF39-205ENST00000490638 CDC27P30260 824 aa15.88■□□□□ 0.13
ARHGEF39-205ENST00000490638 STOX1Q6ZVD7 989 aa15.88■□□□□ 0.13
ARHGEF39-205ENST00000490638 VCPKMTQ9H867 229 aa15.88■□□□□ 0.13
ARHGEF39-205ENST00000490638 SH3GLB2Q9NR46 395 aa15.88■□□□□ 0.13
ARHGEF39-205ENST00000490638 NYAP2Q9P242 653 aa15.88■□□□□ 0.13
ARHGEF39-205ENST00000490638 RCOR1Q9UKL0 485 aa15.88■□□□□ 0.13
ARHGEF39-205ENST00000490638 P4HA1P13674 534 aa15.88■□□□□ 0.13
ARHGEF39-205ENST00000490638 ADAM9Q13443 819 aa15.88■□□□□ 0.13
ARHGEF39-205ENST00000490638 SESTD1Q86VW0 696 aa15.88■□□□□ 0.13
ARHGEF39-205ENST00000490638 CCDC50Q8IVM0 306 aa15.88■□□□□ 0.13
ARHGEF39-205ENST00000490638 GOLGA1Q92805 767 aa15.88■□□□□ 0.13
ARHGEF39-205ENST00000490638 RNF34Q969K3 372 aa15.88■□□□□ 0.13
ARHGEF39-205ENST00000490638 WDR46O15213 610 aaKnown RBP15.88■□□□□ 0.13
ARHGEF39-205ENST00000490638 RASA1P20936 1047 aa15.88■□□□□ 0.13
ARHGEF39-205ENST00000490638 CCDC102AQ96A19 550 aa15.88■□□□□ 0.13
ARHGEF39-205ENST00000490638 CCDC113Q9H0I3 377 aa15.88■□□□□ 0.13
ARHGEF39-205ENST00000490638 BHMT2Q9H2M3 363 aa15.88■□□□□ 0.13
ARHGEF39-205ENST00000490638 KMT5AQ9NQR1 393 aa15.88■□□□□ 0.13
ARHGEF39-205ENST00000490638 MYO5BQ9ULV0 1848 aa15.88■□□□□ 0.13
ARHGEF39-205ENST00000490638 CCL15-CCL14A0A0B4J2E2 113 aa15.88■□□□□ 0.13
ARHGEF39-205ENST00000490638 CCL15Q16663 113 aa15.88■□□□□ 0.13
ARHGEF39-205ENST00000490638 MMP19Q99542 508 aa15.88■□□□□ 0.13
ARHGEF39-205ENST00000490638 MAGEF1Q9HAY2 307 aa15.88■□□□□ 0.13
ARHGEF39-205ENST00000490638 ZNF609O15014 1411 aa15.87■□□□□ 0.13
ARHGEF39-205ENST00000490638 GNA14O95837 355 aa15.87■□□□□ 0.13
ARHGEF39-205ENST00000490638 TNNC2P02585 160 aa15.87■□□□□ 0.13
ARHGEF39-205ENST00000490638 SLC9C1Q4G0N8 1177 aa15.87■□□□□ 0.13
ARHGEF39-205ENST00000490638 PLCD3Q8N3E9 789 aa15.87■□□□□ 0.13
ARHGEF39-205ENST00000490638 BAG1Q99933 345 aaPredicted RBP15.87■□□□□ 0.13
ARHGEF39-205ENST00000490638 HOXA10P31260 410 aaPredicted RBP15.87■□□□□ 0.13
ARHGEF39-205ENST00000490638 ZNF543Q08ER8 600 aa15.87■□□□□ 0.13
ARHGEF39-205ENST00000490638 IFFO1Q0D2I5 559 aa15.87■□□□□ 0.13
ARHGEF39-205ENST00000490638 NBPF9Q3BBW0 867 aa15.87■□□□□ 0.13
ARHGEF39-205ENST00000490638 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.87■□□□□ 0.13
ARHGEF39-205ENST00000490638 MMS19Q96T76 1030 aa15.87■□□□□ 0.13
ARHGEF39-205ENST00000490638 STK17AQ9UEE5 414 aa15.87■□□□□ 0.13
ARHGEF39-205ENST00000490638 MAP9Q49MG5 647 aa15.87■□□□□ 0.13
ARHGEF39-205ENST00000490638 ZNF771Q7L3S4 317 aaPredicted RBP15.87■□□□□ 0.13
ARHGEF39-205ENST00000490638 EXOC8Q8IYI6 725 aa15.87■□□□□ 0.13
ARHGEF39-205ENST00000490638 TRIML1Q8N9V2 468 aa15.87■□□□□ 0.13
ARHGEF39-205ENST00000490638 NUP58Q9BVL2 599 aa15.87■□□□□ 0.13
ARHGEF39-205ENST00000490638 RBSNQ9H1K0 784 aa15.87■□□□□ 0.13
ARHGEF39-205ENST00000490638 TRIM14Q14142 442 aa15.86■□□□□ 0.13
ARHGEF39-205ENST00000490638 CTTNQ14247 550 aaKnown RBP15.86■□□□□ 0.13
ARHGEF39-205ENST00000490638 C16orf86Q6ZW13 317 aa15.86■□□□□ 0.13
ARHGEF39-205ENST00000490638 ZDHHC15Q96MV8 337 aa15.86■□□□□ 0.13
ARHGEF39-205ENST00000490638 PPP1R16BQ96T49 567 aa15.86■□□□□ 0.13
ARHGEF39-205ENST00000490638 ST7Q9NRC1 585 aa15.86■□□□□ 0.13
ARHGEF39-205ENST00000490638 COPB2P35606 906 aa15.86■□□□□ 0.13
ARHGEF39-205ENST00000490638 MCM6Q14566 821 aa15.86■□□□□ 0.13
ARHGEF39-205ENST00000490638 ASIC2Q16515 512 aa15.86■□□□□ 0.13
ARHGEF39-205ENST00000490638 EPB41L4AQ9HCS5 686 aaPredicted RBP15.86■□□□□ 0.13
ARHGEF39-205ENST00000490638 SPDYE2BA6NHP3 402 aa15.86■□□□□ 0.13
ARHGEF39-205ENST00000490638 CTNND1O60716 968 aaKnown RBP15.86■□□□□ 0.13
ARHGEF39-205ENST00000490638 SPDYE6P0CI01 402 aa15.86■□□□□ 0.13
ARHGEF39-205ENST00000490638 SRGAP2CP0DJJ0 459 aa15.86■□□□□ 0.13
ARHGEF39-205ENST00000490638 FGFR2P21802 821 aa15.86■□□□□ 0.13
ARHGEF39-205ENST00000490638 SNX16P57768 344 aa15.86■□□□□ 0.13
ARHGEF39-205ENST00000490638 TTLL4Q14679 1199 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms