RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 DGKHQ86XP1 1220 aa18.27■□□□□ 0.52
COL2A1-207ENST00000490609 DNERQ8NFT8 737 aa18.27■□□□□ 0.52
COL2A1-207ENST00000490609 RILPL2Q969X0 211 aa18.27■□□□□ 0.52
COL2A1-207ENST00000490609 MTG1Q9BT17 334 aaPredicted RBP18.27■□□□□ 0.52
COL2A1-207ENST00000490609 IL25Q9H293 177 aa18.27■□□□□ 0.52
COL2A1-207ENST00000490609 MSRAQ9UJ68 235 aa18.27■□□□□ 0.52
COL2A1-207ENST00000490609 TRIM6-TRIM34B2RNG4 842 aa18.26■□□□□ 0.51
COL2A1-207ENST00000490609 PCP11498 1178 aaKnown RBP18.26■□□□□ 0.51
COL2A1-207ENST00000490609 CPT1AP50416 773 aa18.26■□□□□ 0.51
COL2A1-207ENST00000490609 B4GALNT3Q6L9W6 998 aa18.26■□□□□ 0.51
COL2A1-207ENST00000490609 TAAR1Q96RJ0 339 aa18.26■□□□□ 0.51
COL2A1-207ENST00000490609 OPLAHO14841 1288 aa18.25■□□□□ 0.51
COL2A1-207ENST00000490609 PDE4DQ08499 809 aa18.25■□□□□ 0.51
COL2A1-207ENST00000490609 CCDC85BQ15834 202 aaPredicted RBP18.25■□□□□ 0.51
COL2A1-207ENST00000490609 USH1GQ495M9 461 aa18.25■□□□□ 0.51
COL2A1-207ENST00000490609 NFRKBQ6P4R8 1299 aa18.25■□□□□ 0.51
COL2A1-207ENST00000490609 RPUSD2Q8IZ73 545 aaKnown RBP18.25■□□□□ 0.51
COL2A1-207ENST00000490609 ADGRF4Q8IZF3 695 aa18.25■□□□□ 0.51
COL2A1-207ENST00000490609 SYTL5Q8TDW5 730 aaPredicted RBP18.25■□□□□ 0.51
COL2A1-207ENST00000490609 SCFD2Q8WU76 684 aa18.25■□□□□ 0.51
COL2A1-207ENST00000490609 KAT2BQ92831 832 aa18.25■□□□□ 0.51
COL2A1-207ENST00000490609 GAS2L1Q99501 681 aaPredicted RBP18.25■□□□□ 0.51
COL2A1-207ENST00000490609 ZSWIM5Q9P217 1185 aa18.25■□□□□ 0.51
COL2A1-207ENST00000490609 PCDHA11Q9Y5I1 949 aa18.25■□□□□ 0.51
COL2A1-207ENST00000490609 SLC4A7Q9Y6M7 1214 aa18.25■□□□□ 0.51
COL2A1-207ENST00000490609 EPOPA6NHQ4 379 aa18.24■□□□□ 0.51
COL2A1-207ENST00000490609 NKRFO15226 690 aaKnown RBP eCLIP18.24■□□□□ 0.51
COL2A1-207ENST00000490609 KDM4AO75164 1064 aa18.24■□□□□ 0.51
COL2A1-207ENST00000490609 IQCF3P0C7M6 154 aa18.24■□□□□ 0.51
COL2A1-207ENST00000490609 TXNP10599 105 aaKnown RBP18.24■□□□□ 0.51
COL2A1-207ENST00000490609 NUCB1Q02818 461 aa18.24■□□□□ 0.51
COL2A1-207ENST00000490609 PPP2R5BQ15173 497 aa18.24■□□□□ 0.51
COL2A1-207ENST00000490609 GPATCH4Q5T3I0 446 aaKnown RBP18.24■□□□□ 0.51
COL2A1-207ENST00000490609 DEFB128Q7Z7B8 93 aa18.24■□□□□ 0.51
COL2A1-207ENST00000490609 ENAHQ8N8S7 591 aaPredicted RBP18.24■□□□□ 0.51
COL2A1-207ENST00000490609 PNMA1Q8ND90 353 aa18.24■□□□□ 0.51
COL2A1-207ENST00000490609 ESR2Q92731 530 aa18.24■□□□□ 0.51
COL2A1-207ENST00000490609 SYMPKQ92797 1274 aaKnown RBP18.24■□□□□ 0.51
COL2A1-207ENST00000490609 SLC28A3Q9HAS3 691 aa18.24■□□□□ 0.51
COL2A1-207ENST00000490609 RFXAPO00287 272 aa18.23■□□□□ 0.51
COL2A1-207ENST00000490609 SUPT20HL2P0C7V6 817 aa18.23■□□□□ 0.51
COL2A1-207ENST00000490609 ARHGAP1Q07960 439 aa18.23■□□□□ 0.51
COL2A1-207ENST00000490609 CDC37Q16543 378 aaPredicted RBP18.23■□□□□ 0.51
COL2A1-207ENST00000490609 LY6KQ17RY6 165 aa18.23■□□□□ 0.51
COL2A1-207ENST00000490609 SLC35G1Q2M3R5 365 aa18.23■□□□□ 0.51
COL2A1-207ENST00000490609 TCTN1Q2MV58 587 aa18.23■□□□□ 0.51
COL2A1-207ENST00000490609 CWC27Q6UX04 472 aaKnown RBP18.23■□□□□ 0.51
COL2A1-207ENST00000490609 CHD1LQ86WJ1 897 aa18.23■□□□□ 0.51
COL2A1-207ENST00000490609 ASB2Q96Q27 587 aa18.23■□□□□ 0.51
COL2A1-207ENST00000490609 JMJD4Q9H9V9 463 aa18.23■□□□□ 0.51
COL2A1-207ENST00000490609 ZBTB47Q9UFB7 747 aaPredicted RBP18.23■□□□□ 0.51
COL2A1-207ENST00000490609 DOCK5Q9H7D0 1870 aa18.22■□□□□ 0.51
COL2A1-207ENST00000490609 B4E1Z4 1266 aa18.22■□□□□ 0.51
COL2A1-207ENST00000490609 ZNF213O14771 459 aa18.22■□□□□ 0.51
COL2A1-207ENST00000490609 ATP2A2P16615 1042 aaKnown RBP18.22■□□□□ 0.51
COL2A1-207ENST00000490609 IGFBP4P22692 258 aa18.22■□□□□ 0.51
COL2A1-207ENST00000490609 QRICH1Q2TAL8 776 aa18.22■□□□□ 0.51
COL2A1-207ENST00000490609 SPRED2Q7Z698 418 aa18.22■□□□□ 0.51
COL2A1-207ENST00000490609 STAG2Q8N3U4 1231 aa18.22■□□□□ 0.51
COL2A1-207ENST00000490609 AFG1LQ8WV93 481 aa18.22■□□□□ 0.51
COL2A1-207ENST00000490609 ATXN2LQ8WWM7 1075 aaKnown RBP18.22■□□□□ 0.51
COL2A1-207ENST00000490609 DHX38Q92620 1227 aaKnown RBP18.22■□□□□ 0.51
COL2A1-207ENST00000490609 ZSCAN10Q96SZ4 725 aaPredicted RBP18.22■□□□□ 0.51
COL2A1-207ENST00000490609 MTIF3Q9H2K0 278 aaKnown RBP18.22■□□□□ 0.51
COL2A1-207ENST00000490609 RNF41Q9H4P4 317 aaPredicted RBP18.22■□□□□ 0.51
COL2A1-207ENST00000490609 PNMA2Q9UL42 364 aa18.22■□□□□ 0.51
COL2A1-207ENST00000490609 PITPNM1O00562 1244 aa18.21■□□□□ 0.51
COL2A1-207ENST00000490609 PPP1R11O60927 126 aaPredicted RBP18.21■□□□□ 0.51
COL2A1-207ENST00000490609 MMP3P08254 477 aa18.21■□□□□ 0.51
COL2A1-207ENST00000490609 PTPN11Q06124 597 aaPredicted RBP18.21■□□□□ 0.51
COL2A1-207ENST00000490609 GDF6Q6KF10 455 aaPredicted RBP18.21■□□□□ 0.51
COL2A1-207ENST00000490609 ZBBXA8MT70 800 aa18.2■□□□□ 0.5
COL2A1-207ENST00000490609 TNFRSF10AO00220 468 aa18.2■□□□□ 0.5
COL2A1-207ENST00000490609 KPNA6O60684 536 aa18.2■□□□□ 0.5
COL2A1-207ENST00000490609 RGS20O76081 388 aa18.2■□□□□ 0.5
COL2A1-207ENST00000490609 CA3P07451 260 aa18.2■□□□□ 0.5
COL2A1-207ENST00000490609 PFKMP08237 780 aa18.2■□□□□ 0.5
COL2A1-207ENST00000490609 POU3F3P20264 500 aaPredicted RBP18.2■□□□□ 0.5
COL2A1-207ENST00000490609 HIC1Q14526 733 aa18.2■□□□□ 0.5
COL2A1-207ENST00000490609 SEC23AQ15436 765 aa18.2■□□□□ 0.5
COL2A1-207ENST00000490609 FAM47CQ5HY64 1035 aa18.2■□□□□ 0.5
COL2A1-207ENST00000490609 PPP2R2DQ66LE6 453 aa18.2■□□□□ 0.5
COL2A1-207ENST00000490609 KRT40Q6A162 431 aa18.2■□□□□ 0.5
COL2A1-207ENST00000490609 SEPT14Q6ZU15 432 aa18.2■□□□□ 0.5
COL2A1-207ENST00000490609 SESTD1Q86VW0 696 aa18.2■□□□□ 0.5
COL2A1-207ENST00000490609 MTMR8Q96EF0 704 aa18.2■□□□□ 0.5
COL2A1-207ENST00000490609 DSCC1Q9BVC3 393 aa18.2■□□□□ 0.5
COL2A1-207ENST00000490609 MAF1Q9H063 256 aa18.2■□□□□ 0.5
COL2A1-207ENST00000490609 GPHNQ9NQX3 736 aaPredicted RBP18.2■□□□□ 0.5
COL2A1-207ENST00000490609 THEGQ9P2T0 379 aa18.2■□□□□ 0.5
COL2A1-207ENST00000490609 DDX41Q9UJV9 622 aaKnown RBP18.2■□□□□ 0.5
COL2A1-207ENST00000490609 ABCB11O95342 1321 aa18.2■□□□□ 0.5
COL2A1-207ENST00000490609 COL4A4P53420 1690 aaPredicted RBP18.19■□□□□ 0.5
COL2A1-207ENST00000490609 GHRHRQ02643 423 aa18.19■□□□□ 0.5
COL2A1-207ENST00000490609 TRAF7Q6Q0C0 670 aa18.19■□□□□ 0.5
COL2A1-207ENST00000490609 EXOC6Q8TAG9 804 aa18.19■□□□□ 0.5
COL2A1-207ENST00000490609 CERS4Q9HA82 394 aa18.19■□□□□ 0.5
COL2A1-207ENST00000490609 MTCH2Q9Y6C9 303 aa18.19■□□□□ 0.5
COL2A1-207ENST00000490609 BMP1P13497 986 aa18.18■□□□□ 0.5
COL2A1-207ENST00000490609 RFC2P35250 354 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms