RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 CDC37Q16543 378 aaPredicted RBP20.8■□□□□ 0.92
YIPF3-208ENST00000490447 PLEKHM2Q8IWE5 1019 aa20.8■□□□□ 0.92
YIPF3-208ENST00000490447 USP38Q8NB14 1042 aa20.8■□□□□ 0.92
YIPF3-208ENST00000490447 OSBPL3Q9H4L5 887 aa20.8■□□□□ 0.92
YIPF3-208ENST00000490447 ABCB11O95342 1321 aa20.8■□□□□ 0.92
YIPF3-208ENST00000490447 CHD9Q3L8U1 2897 aa20.8■□□□□ 0.92
YIPF3-208ENST00000490447 DHX16O60231 1041 aaKnown RBP20.79■□□□□ 0.92
YIPF3-208ENST00000490447 IMMTQ16891 758 aaKnown RBP20.79■□□□□ 0.92
YIPF3-208ENST00000490447 NBPF20Q3BBV1 942 aa20.79■□□□□ 0.92
YIPF3-208ENST00000490447 ASPRV1Q53RT3 343 aa20.79■□□□□ 0.92
YIPF3-208ENST00000490447 RGS22Q8NE09 1264 aa20.79■□□□□ 0.92
YIPF3-208ENST00000490447 ZSCAN10Q96SZ4 725 aaPredicted RBP20.79■□□□□ 0.92
YIPF3-208ENST00000490447 MAF1Q9H063 256 aa20.79■□□□□ 0.92
YIPF3-208ENST00000490447 CPVLQ9H3G5 476 aa20.79■□□□□ 0.92
YIPF3-208ENST00000490447 NOD1Q9Y239 953 aa20.79■□□□□ 0.92
YIPF3-208ENST00000490447 A6NJR5 290 aa20.78■□□□□ 0.92
YIPF3-208ENST00000490447 IGFBP4P22692 258 aa20.78■□□□□ 0.92
YIPF3-208ENST00000490447 NUCB1Q02818 461 aa20.78■□□□□ 0.92
YIPF3-208ENST00000490447 TJAP1Q5JTD0 557 aa20.78■□□□□ 0.92
YIPF3-208ENST00000490447 PPP2R2DQ66LE6 453 aa20.78■□□□□ 0.92
YIPF3-208ENST00000490447 NFRKBQ6P4R8 1299 aa20.78■□□□□ 0.92
YIPF3-208ENST00000490447 DEFB128Q7Z7B8 93 aa20.78■□□□□ 0.92
YIPF3-208ENST00000490447 MCF2L2Q86YR7 1114 aa20.78■□□□□ 0.92
YIPF3-208ENST00000490447 COPS5Q92905 334 aa20.78■□□□□ 0.92
YIPF3-208ENST00000490447 B4E1Z4 1266 aa20.78■□□□□ 0.92
YIPF3-208ENST00000490447 ACTN1P12814 892 aa20.78■□□□□ 0.92
YIPF3-208ENST00000490447 ATP2A2P16615 1042 aaKnown RBP20.78■□□□□ 0.92
YIPF3-208ENST00000490447 CHMP4BP1P59074 171 aa20.78■□□□□ 0.92
YIPF3-208ENST00000490447 PTPN11Q06124 597 aaPredicted RBP20.78■□□□□ 0.92
YIPF3-208ENST00000490447 ADGRF4Q8IZF3 695 aa20.78■□□□□ 0.92
YIPF3-208ENST00000490447 RETREG2Q8NC44 543 aa20.78■□□□□ 0.92
YIPF3-208ENST00000490447 DSCC1Q9BVC3 393 aa20.78■□□□□ 0.92
YIPF3-208ENST00000490447 KRT23Q9C075 422 aa20.78■□□□□ 0.92
YIPF3-208ENST00000490447 CTNNA3Q9UI47 895 aa20.78■□□□□ 0.92
YIPF3-208ENST00000490447 YBX2Q9Y2T7 364 aaKnown RBP20.78■□□□□ 0.92
YIPF3-208ENST00000490447 PARP1P09874 1014 aaKnown RBP20.77■□□□□ 0.91
YIPF3-208ENST00000490447 RFC2P35250 354 aa20.77■□□□□ 0.91
YIPF3-208ENST00000490447 RABGGTBP53611 331 aa20.77■□□□□ 0.91
YIPF3-208ENST00000490447 NSUN6Q8TEA1 469 aaKnown RBP20.77■□□□□ 0.91
YIPF3-208ENST00000490447 YTHDC1Q96MU7 727 aaKnown RBP20.77■□□□□ 0.91
YIPF3-208ENST00000490447 UBAC1Q9BSL1 405 aa20.77■□□□□ 0.91
YIPF3-208ENST00000490447 CNNM2Q9H8M5 875 aa20.77■□□□□ 0.91
YIPF3-208ENST00000490447 PCDHA11Q9Y5I1 949 aa20.77■□□□□ 0.91
YIPF3-208ENST00000490447 PITPNM1O00562 1244 aa20.76■□□□□ 0.91
YIPF3-208ENST00000490447 ARIH2O95376 493 aa20.76■□□□□ 0.91
YIPF3-208ENST00000490447 BFSP2Q13515 415 aa20.76■□□□□ 0.91
YIPF3-208ENST00000490447 STXBP2Q15833 593 aa20.76■□□□□ 0.91
YIPF3-208ENST00000490447 SEPT14Q6ZU15 432 aa20.76■□□□□ 0.91
YIPF3-208ENST00000490447 FBXO11Q86XK2 927 aa20.76■□□□□ 0.91
YIPF3-208ENST00000490447 ENAHQ8N8S7 591 aaPredicted RBP20.76■□□□□ 0.91
YIPF3-208ENST00000490447 ANKS1AQ92625 1134 aa20.76■□□□□ 0.91
YIPF3-208ENST00000490447 MRPL11Q9Y3B7 192 aaKnown RBP20.76■□□□□ 0.91
YIPF3-208ENST00000490447 MUC3AQ02505 3323 aa20.75■□□□□ 0.91
YIPF3-208ENST00000490447 GH1P01241 217 aa20.75■□□□□ 0.91
YIPF3-208ENST00000490447 IGHDP01880 384 aa20.75■□□□□ 0.91
YIPF3-208ENST00000490447 CCDC85BQ15834 202 aaPredicted RBP20.75■□□□□ 0.91
YIPF3-208ENST00000490447 QRICH1Q2TAL8 776 aa20.75■□□□□ 0.91
YIPF3-208ENST00000490447 SYTL5Q8TDW5 730 aaPredicted RBP20.75■□□□□ 0.91
YIPF3-208ENST00000490447 PPP1R13LQ8WUF5 828 aa20.75■□□□□ 0.91
YIPF3-208ENST00000490447 IWS1Q96ST2 819 aa20.75■□□□□ 0.91
YIPF3-208ENST00000490447 RMDN3Q96TC7 470 aa20.75■□□□□ 0.91
YIPF3-208ENST00000490447 VAT1LQ9HCJ6 419 aa20.75■□□□□ 0.91
YIPF3-208ENST00000490447 ZSWIM5Q9P217 1185 aa20.75■□□□□ 0.91
YIPF3-208ENST00000490447 THEGQ9P2T0 379 aa20.75■□□□□ 0.91
YIPF3-208ENST00000490447 LAMA4Q16363 1823 aa20.74■□□□□ 0.91
YIPF3-208ENST00000490447 ADGRE1Q14246 886 aa20.74■□□□□ 0.91
YIPF3-208ENST00000490447 LY6KQ17RY6 165 aa20.74■□□□□ 0.91
YIPF3-208ENST00000490447 IFIT1BQ5T764 474 aaKnown RBP20.74■□□□□ 0.91
YIPF3-208ENST00000490447 ARHGEF16Q5VV41 709 aa20.74■□□□□ 0.91
YIPF3-208ENST00000490447 CHST3Q7LGC8 479 aa20.74■□□□□ 0.91
YIPF3-208ENST00000490447 CCDC155Q8N6L0 562 aa20.74■□□□□ 0.91
YIPF3-208ENST00000490447 ATXN2LQ8WWM7 1075 aaKnown RBP20.74■□□□□ 0.91
YIPF3-208ENST00000490447 TBC1D5Q92609 795 aa20.74■□□□□ 0.91
YIPF3-208ENST00000490447 TAAR1Q96RJ0 339 aa20.74■□□□□ 0.91
YIPF3-208ENST00000490447 FTOQ9C0B1 505 aaKnown RBP eCLIP20.74■□□□□ 0.91
YIPF3-208ENST00000490447 PRDM6Q9NQX0 595 aa20.74■□□□□ 0.91
YIPF3-208ENST00000490447 MMP3P08254 477 aa20.73■□□□□ 0.91
YIPF3-208ENST00000490447 IQCF3P0C7M6 154 aa20.73■□□□□ 0.91
YIPF3-208ENST00000490447 TMEM67Q5HYA8 995 aa20.73■□□□□ 0.91
YIPF3-208ENST00000490447 AFG1LQ8WV93 481 aa20.73■□□□□ 0.91
YIPF3-208ENST00000490447 SLC9A7Q96T83 725 aa20.73■□□□□ 0.91
YIPF3-208ENST00000490447 TSPYL2Q9H2G4 693 aaPredicted RBP20.73■□□□□ 0.91
YIPF3-208ENST00000490447 CHD7Q9P2D1 2997 aa20.73■□□□□ 0.91
YIPF3-208ENST00000490447 CFBP00751 764 aa20.72■□□□□ 0.91
YIPF3-208ENST00000490447 MYOGP15173 224 aa20.72■□□□□ 0.91
YIPF3-208ENST00000490447 EIF2AK2P19525 551 aaKnown RBP20.72■□□□□ 0.91
YIPF3-208ENST00000490447 CASTP20810 708 aaKnown RBP20.72■□□□□ 0.91
YIPF3-208ENST00000490447 PTGISQ16647 500 aa20.72■□□□□ 0.91
YIPF3-208ENST00000490447 CCDC62Q6P9F0 684 aa20.72■□□□□ 0.91
YIPF3-208ENST00000490447 IL27Q8NEV9 243 aa20.72■□□□□ 0.91
YIPF3-208ENST00000490447 EXOC6Q8TAG9 804 aa20.72■□□□□ 0.91
YIPF3-208ENST00000490447 VWCEQ96DN2 955 aa20.72■□□□□ 0.91
YIPF3-208ENST00000490447 JMJD4Q9H9V9 463 aa20.72■□□□□ 0.91
YIPF3-208ENST00000490447 COL20A1Q9P218 1284 aa20.72■□□□□ 0.91
YIPF3-208ENST00000490447 SCN10AQ9Y5Y9 1956 aa20.71■□□□□ 0.91
YIPF3-208ENST00000490447 MICALL1Q8N3F8 863 aa20.71■□□□□ 0.91
YIPF3-208ENST00000490447 CAGE1Q8TC20 777 aa20.71■□□□□ 0.91
YIPF3-208ENST00000490447 AMNQ9BXJ7 453 aa20.71■□□□□ 0.91
YIPF3-208ENST00000490447 MRVI1Q9Y6F6 885 aa20.71■□□□□ 0.91
YIPF3-208ENST00000490447 CA3P07451 260 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms